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Lista de obras de Jean-Marc Daran

A CRISPR/Cas9-based exploration into the elusive mechanism for lactate export in Saccharomyces cerevisiae

artículo científico publicado en 2017

A Minimal Set of Glycolytic Genes Reveals Strong Redundancies in Saccharomyces cerevisiae Central Metabolism

artículo científico publicado en 2015

A new laboratory evolution approach to select for constitutive acetic acid tolerance in Saccharomyces cerevisiae and identification of causal mutations.

artículo científico publicado en 2016

A new physiological role for Pdr12p in Saccharomyces cerevisiae: export of aromatic and branched-chain organic acids produced in amino acid catabolism.

artículo científico

A protocol for introduction of multiple genetic modifications in Saccharomyces cerevisiae using CRISPR/Cas9

artículo científico publicado en 2018

A toolkit for rapid CRISPR-SpCas9 assisted construction of hexose-transport-deficient Saccharomyces cerevisiae strains

article

A versatile, efficient strategy for assembly of multi-fragment expression vectors in Saccharomyces cerevisiae using 60 bp synthetic recombination sequences.

artículo científico publicado en 2013

Acclimation of Saccharomyces cerevisiae to low temperature: a chemostat-based transcriptome analysis

artículo científico publicado en 2007

Allele-specific genome editing using CRISPR-Cas9 is associated with loss of heterozygosity in diploid yeast

artículo científico publicado en 2019

Alleviation of feedback inhibition in Saccharomyces cerevisiae aromatic amino acid biosynthesis: quantification of metabolic impact

artículo científico publicado en 2008

Alternative reactions at the interface of glycolysis and citric acid cycle in Saccharomyces cerevisiae

artículo científico publicado en 2016

An alternative, arginase-independent pathway for arginine metabolism in Kluyveromyces lactis involves guanidinobutyrase as a key enzyme.

artículo científico publicado en 2014

An atypical PMR2 locus is responsible for hypersensitivity to sodium and lithium cations in the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D

artículo científico publicado en 2009

An internal deletion in MTH1 enables growth on glucose of pyruvate-decarboxylase negative, non-fermentative Saccharomyces cerevisiae.

artículo científico publicado en 2012

CRISPR-Cas9 mediated gene deletions in lager yeast Saccharomyces pastorianus

artículo científico publicado en 2017

CRISPR/Cas9: a molecular Swiss army knife for simultaneous introduction of multiple genetic modifications in Saccharomyces cerevisiae

artículo científico

Carbon dioxide fixation by Calvin-Cycle enzymes improves ethanol yield in yeast

artículo científico publicado en 2013

Chemostat-based micro-array analysis in baker's yeast.

artículo científico publicado en 2009

Chromosomal Copy Number Variation in Saccharomyces pastorianus Is Evidence for Extensive Genome Dynamics in Industrial Lager Brewing Strains.

artículo científico publicado en 2015

Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: a quantitative analysis of a compendium of chemostat-based transcriptome data.

artículo científico publicado en 2009

Combined engineering of disaccharide transport and phosphorolysis for enhanced ATP yield from sucrose fermentation in Saccharomyces cerevisiae.

artículo científico publicado en 2017

Comparative assessment of native and heterologous 2-oxo acid decarboxylases for application in isobutanol production by Saccharomyces cerevisiae.

artículo científico publicado en 2015

Comparative genotyping of the Saccharomyces cerevisiae laboratory strains S288C and CEN.PK113-7D using oligonucleotide microarrays.

artículo científico publicado en 2003

Connecting central carbon and aromatic amino acid metabolisms to improve de novo 2-phenylethanol production in Saccharomyces cerevisiae

artículo científico publicado en 2019

Construction of an hdfA Penicillium chrysogenum strain impaired in non-homologous end-joining and analysis of its potential for functional analysis studies

artículo científico publicado en 2009

Contribution of the Saccharomyces cerevisiae transcriptional regulator Leu3p to physiology and gene expression in nitrogen- and carbon-limited chemostat cultures.

artículo científico publicado en 2005

Control of the Glycolytic Flux inSaccharomyces cerevisiaeGrown at Low Temperature

artículo científico publicado en 2007

Correlation between transcript profiles and fitness of deletion mutants in anaerobic chemostat cultures of Saccharomyces cerevisiae.

artículo científico publicado en 2007

De novo detection of copy number variation by co-assembly.

artículo científico publicado en 2012

De novo production of the flavonoid naringenin in engineered Saccharomyces cerevisiae

artículo científico publicado en 2012

De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology

artículo científico publicado en 2012

Degeneration of penicillin production in ethanol-limited chemostat cultivations of Penicillium chrysogenum: A systems biology approach

artículo científico publicado el 19 de agosto de 2011

Deletion of theSaccharomyces cerevisiae ARO8gene, encoding an aromatic amino acid transaminase, enhances phenylethanol production from glucose

article

Determination of the Cytosolic NADPH/NADP Ratio in Saccharomyces cerevisiae using Shikimate Dehydrogenase as Sensor Reaction.

artículo científico publicado en 2015

Discovery and Synthetic Applications of a NAD(P)H-Dependent Reductive Aminase from

artículo científico publicado en 2025

Efficient simultaneous excision of multiple selectable marker cassettes using I-SceI-induced double-strand DNA breaks in Saccharomyces cerevisiae

artículo científico publicado en 2014

Elimination of sucrose transport and hydrolysis in Saccharomyces cerevisiae: a platform strain for engineering sucrose metabolism.

artículo científico publicado en 2017

Engineering acetyl coenzyme A supply: functional expression of a bacterial pyruvate dehydrogenase complex in the cytosol of Saccharomyces cerevisiae.

artículo científico publicado en 2014

Engineering and analysis of a Saccharomyces cerevisiae strain that uses formaldehyde as an auxiliary substrate

artículo científico publicado en 2008

Engineering de novo anthocyanin production in Saccharomyces cerevisiae.

artículo científico publicado en 2018

Engineering of Penicillium chrysogenum for fermentative production of a novel carbamoylated cephem antibiotic precursor.

artículo científico publicado en 2009

Engineering topology and kinetics of sucrose metabolism in Saccharomyces cerevisiae for improved ethanol yield

artículo científico publicado en 2011

Evolutionary Engineering in Chemostat Cultures for Improved Maltotriose Fermentation Kinetics in Saccharomyces pastorianus Lager Brewing Yeast.

artículo científico publicado en 2017

Excessive by-product formation: A key contributor to low isobutanol yields of engineered Saccharomyces cerevisiae strains

artículo científico publicado en 2016

Exploiting combinatorial cultivation conditions to infer transcriptional regulation

artículo científico publicado en 2007

Exploring and dissecting genome-wide gene expression responses of Penicillium chrysogenum to phenylacetic acid consumption and penicillinG production

artículo científico publicado en 2009

Exploring the abundance of oleate hydratases in the genus Rhodococcus-discovery of novel enzymes with complementary substrate scope

scientific article published on 01 May 2020

Fermentation of glucose-xylose-arabinose mixtures by a synthetic consortium of single-sugar-fermenting Saccharomyces cerevisiae strains

scientific article published on 01 December 2018

FnCpf1: a novel and efficient genome editing tool for Saccharomyces cerevisiae

artículo científico publicado en 2017

Functional analysis and transcriptional regulation of two orthologs of ARO10, encoding broad-substrate-specificity 2-oxo-acid decarboxylases, in the brewing yeast Saccharomyces pastorianus CBS1483.

artículo científico publicado en 2013

Functional characterization of a Penicillium chrysogenum mutanase gene induced upon co-cultivation with Bacillus subtilis

artículo científico publicado en 2014

Functional characterization of the oxaloacetase encoding gene and elimination of oxalate formation in the β-lactam producer Penicillium chrysogenum.

artículo científico publicado en 2011

Functional expression of a heterologous nickel-dependent, ATP-independent urease in Saccharomyces cerevisiae

artículo científico publicado en 2015

Genetic and Biochemical Characterization of the UGP1 Gene Encoding the UDP‐Glucose Pyrophosphorylase from Saccharomyces cerevisiae

artículo científico publicado el 15 de octubre de 1995

Genome duplication and mutations in ACE2 cause multicellular, fast-sedimenting phenotypes in evolved Saccharomyces cerevisiae.

artículo científico publicado en 2013

Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

artículo científico publicado en 2008

Genome-wide analytical approaches for reverse metabolic engineering of industrially relevant phenotypes in yeast.

artículo científico

Heterologous carotenoid production in Saccharomyces cerevisiae induces the pleiotropic drug resistance stress response

scientific article published on 01 December 2010

Himalayan Saccharomyces eubayanus Genome Sequences Reveal Genetic Markers Explaining Heterotic Maltotriose Consumption by Saccharomyces pastorianus Hybrids

artículo científico publicado en 2019

Identification of Oxygen-Independent Pathways for Pyridine Nucleotide and Coenzyme A Synthesis in Anaerobic Fungi by Expression of Candidate Genes in Yeast

artículo científico publicado en 2021

Identity of the growth-limiting nutrient strongly affects storage carbohydrate accumulation in anaerobic chemostat cultures of Saccharomyces cerevisiae

artículo científico publicado en 2009

Impact of velvet complex on transcriptome and penicillin G production in glucose-limited chemostat cultures of a β-lactam high-producing Penicillium chrysogenum strain.

artículo científico publicado en 2012

In vivo analysis of Saccharomyces cerevisiae plasma membrane ATPase Pma1p isoforms with increased in vitro H+/ATP stoichiometry.

artículo científico publicado en 2012

In vivo recombination of Saccharomyces eubayanus maltose-transporter genes yields a chimeric transporter that enables maltotriose fermentation

article

Increasing free-energy (ATP) conservation in maltose-grown Saccharomyces cerevisiae by expression of a heterologous maltose phosphorylase

artículo científico publicado en 2011

Industrial Relevance of Chromosomal Copy Number Variation in Saccharomyces Yeasts.

artículo científico publicado en 2017

Integrating genome assemblies with MAIA.

artículo científico publicado en 2010

Involvement of Snf7p and Rim101p in the transcriptional regulation of TIR1 and other anaerobically upregulated genes in Saccharomyces cerevisiae.

artículo científico publicado en 2010

Involvement of vacuolar sequestration and active transport in tolerance of Saccharomyces cerevisiae to hop iso-alpha-acids.

artículo científico publicado en 2009

Laboratory Evolution of a Biotin-Requiring Saccharomyces cerevisiae Strain for Full Biotin Prototrophy and Identification of Causal Mutations.

artículo científico publicado en 2017

Laboratory Evolution of a × Hybrid Under Simulated Lager-Brewing Conditions

artículo científico publicado en 2019

Laboratory evolution of a glucose-phosphorylation-deficient, arabinose-fermenting S. cerevisiae strain reveals mutations in GAL2 that enable glucose-insensitive l-arabinose uptake

artículo científico publicado en 2018

Laboratory evolution of new lactate transporter genes in a jen1Δ mutant of Saccharomyces cerevisiae and their identification as ADY2 alleles by whole-genome resequencing and transcriptome analysis

artículo científico publicado en 2012

Lager-brewing yeasts in the era of modern genetics

scientific article published on 01 November 2019

Long-term adaptation of Saccharomyces cerevisiae to the burden of recombinant insulin production

artículo científico publicado en 2013

Membrane potential independent transport of NH3 in the absence of ammonium permeases in Saccharomyces cerevisiae.

artículo científico publicado en 2017

Metabolic engineering of β-oxidation in Penicillium chrysogenum for improved semi-synthetic cephalosporin biosynthesis

artículo científico publicado en 2012

Multiplex genome editing of microorganisms using CRISPR-Cas

artículo científico publicado en 2019

Mutations in PMR1 stimulate xylose isomerase activity and anaerobic growth on xylose of engineered Saccharomyces cerevisiae by influencing manganese homeostasis.

artículo científico publicado en 2017

Nanopore sequencing enables near-complete de novo assembly of Saccharomyces cerevisiae reference strain CEN.PK113-7D.

artículo científico publicado en 2017

One-step assembly and targeted integration of multigene constructs assisted by the I-SceI meganuclease in Saccharomyces cerevisiae

artículo científico publicado en 2013

Pathway swapping: Toward modular engineering of essential cellular processes.

artículo científico publicado en 2016

Phenotype-Independent Isolation of Interspecies Hybrids by Dual-Dye Fluorescent Staining and Fluorescence-Activated Cell Sorting

artículo científico publicado en 2019

Physiological and morphological effects of genetic alterations leading to a reduced synthesis of UDP-glucose in Saccharomyces cerevisiae

artículo científico publicado el 1 de agosto de 1997

Physiological and transcriptional responses of Saccharomyces cerevisiae to zinc limitation in chemostat cultures

artículo científico publicado en 2007

Physiological characterization of the ARO10-dependent, broad-substrate-specificity 2-oxo acid decarboxylase activity of Saccharomyces cerevisiae.

artículo científico publicado en 2005

Polycistronic expression of a β-carotene biosynthetic pathway in Saccharomyces cerevisiae coupled to β-ionone production

artículo científico publicado en 2014

Predicting metabolic fluxes using gene expression differences as constraints

artículo científico publicado en 2011

Replacement of the Saccharomyces cerevisiae acetyl-CoA synthetases by alternative pathways for cytosolic acetyl-CoA synthesis

artículo científico publicado en 2013

Replacement of the initial steps of ethanol metabolism in Saccharomyces cerevisiae by ATP-independent acetylating acetaldehyde dehydrogenase.

artículo científico publicado en 2016

Requirements for Carnitine Shuttle-Mediated Translocation of Mitochondrial Acetyl Moieties to the Yeast Cytosol

artículo científico publicado en 2016

Resolving phenylalanine metabolism sheds light on natural synthesis of penicillin G in Penicillium chrysogenum.

artículo científico publicado en 2011

Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study.

artículo científico publicado en 2003

S. cerevisiae × S. eubayanus interspecific hybrid, the best of both worlds and beyond

artículo científico publicado en 2015

Selection of Pof-Saccharomyces eubayanus Variants for the Construction of S. cerevisiae × S. eubayanus Hybrids With Reduced 4-Vinyl Guaiacol Formation

scientific article published on 27 July 2018

Stress-induced expression is enriched for evolutionarily young genes in diverse budding yeasts

artículo científico publicado en 2020

Structural, Physiological and Regulatory Analysis of Maltose Transporter Genes in CBS 12357

article

Substrate specificity of thiamine pyrophosphate-dependent 2-oxo-acid decarboxylases in Saccharomyces cerevisiae.

artículo científico publicado en 2012

The Ehrlich pathway for fusel alcohol production: a century of research on Saccharomyces cerevisiae metabolism

artículo científico publicado en 2008

The Penicillium chrysogenum aclA gene encodes a broad-substrate-specificity acyl-coenzyme A ligase involved in activation of adipic acid, a side-chain precursor for cephem antibiotics

artículo científico publicado en 2010

The Penicillium chrysogenum transporter PcAraT enables high-affinity, glucose-insensitive l-arabinose transport in Saccharomyces cerevisiae.

artículo científico publicado en 2018

The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels

artículo científico publicado en 2007

The genome sequence of the popular hexose-transport-deficient Saccharomyces cerevisiae strain EBY.VW4000 reveals LoxP/Cre-induced translocations and gene loss

artículo científico publicado en 2015

Toward Developing a Yeast Cell Factory for the Production of Prenylated Flavonoids

scientific article published on 02 May 2019

Transcriptional responses ofSaccharomyces cerevisiaeto preferred and nonpreferred nitrogen sources in glucose-limited chemostat cultures

article

Two-dimensional transcriptome analysis in chemostat cultures. Combinatorial effects of oxygen availability and macronutrient limitation in Saccharomyces cerevisiae.

artículo científico publicado en 2004

Under pressure: evolutionary engineering of yeast strains for improved performance in fuels and chemicals production

artículo científico publicado en 2017

Vitamin requirements and biosynthesis in Saccharomyces cerevisiae

scientific article published on 06 February 2020

When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation.

artículo científico publicado en 2006

amdSYM, a new dominant recyclable marker cassette for Saccharomyces cerevisiae

artículo científico publicado en 2012

Genome editing in Kluyveromyces and Ogataea yeasts using a broad-host-range Cas9/gRNA co-expression plasmid

artículo científico publicado en 2018