13C tracer experiments and metabolite balancing for metabolic flux analysis: comparing two approaches
artículo científico publicado en 1998
A Closer Look at Bacteroides: Phylogenetic Relationship and Genomic Implications of a Life in the Human Gut
artículo científico publicado en 2011
A Simple morphologically structured model describing the growth of filamentous microorganisms
article
A Single Chromosome Strain of S. cerevisiae Exhibits Diminished Ethanol Metabolism and Tolerance
artículo científico publicado en 2020
A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
A bacterial platform for producing aromatic esters from glycerol
artículo científico publicado en 2024
A community-driven global reconstruction of human metabolism.
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artículo científico publicado en 2013
A comparison of direct infusion MS and GC-MS for metabolic footprinting of yeast mutants
artículo científico publicado en 2007
A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae
artículo científico publicado en 2012
A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism
artículo científico publicado en 2019
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology
artículo científico publicado en 2008
A dedicated database system for handling multi-level data in systems biology
artículo científico publicado en 2014
A functional genomics approach using metabolomics andin silicopathway analysis
artículo científico publicado en 2002
A gRNA-tRNA array for CRISPR-Cas9 based rapid multiplexed genome editing in Saccharomyces cerevisiae
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artículo científico publicado en 2019
A maternal diet of fatty fish reduces body fat of offspring compared with a maternal diet of beef and a post-weaning diet of fish improves insulin sensitivity and lipid profile in adult C57BL/6 male mice
artículo científico publicado en 2013
A molecular genetic toolbox for Yarrowia lipolytica
artículo científico publicado en 2017
A novel yeast hybrid modeling framework integrating Boolean and enzyme-constrained networks enables exploration of the interplay between signaling and metabolism
artículo científico publicado en 2021
A novel yeast hybrid modeling framework integrating Boolean and enzyme-constrained networks enables exploration of the interplay between signaling and metabolism
artículo científico publicado en 2021
A simple and reliable method for the determination of cellular RNA content
article by S. Benthin et al published 1991 in Biotechnology Letters
A single chromosome strain of S. cerevisiae exhibits diminished ethanol metabolism and tolerance
artículo científico publicado en 2021
A single chromosome strain of S. cerevisiae exhibits diminished ethanol metabolism and tolerance
artículo científico publicado en 2021
A single chromosome strain of S. cerevisiae exhibits diminished ethanol metabolism and tolerance
artículo científico publicado en 2021
A systems biology approach to study glucose repression in the yeast Saccharomyces cerevisiae
artículo científico publicado en 2007
A systems-level approach for metabolic engineering of yeast cell factories.
artículo científico publicado en 2012
A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species
artículo científico publicado en 2008
A universal fixation method based on quaternary ammonium salts (RNAlater) for omics-technologies: Saccharomyces cerevisiae as a case study
artículo científico publicado en 2013
ANT: Software for Generating and Evaluating Degenerate Codons for Natural and Expanded Genetic Codes.
artículo científico publicado en 2015
Absolute Quantification of Protein and mRNA Abundances Demonstrate Variability in Gene-Specific Translation Efficiency in Yeast
artículo científico publicado en 2017
Absolute yeast mitochondrial proteome quantification reveals trade-off between biosynthesis and energy generation during diauxic shift
artículo científico publicado en 2020
Ach1 is involved in shuttling mitochondrial acetyl units for cytosolic C2 provision in Saccharomyces cerevisiae lacking pyruvate decarboxylase
artículo científico publicado en 2015
Acoustic off-gas analyser for bioreactors: Precision, accuracy and dynamics of detection
Adaptation to different types of stress converge on mitochondrial metabolism
artículo científico publicado en 2016
Adaptations in metabolism and protein translation give rise to the Crabtree effect in yeast
artículo científico publicado en 2021
Adaptive Evolution of Phosphorus Metabolism in Prochlorococcus
artículo científico publicado en 2016
Adaptive mutations in sugar metabolism restore growth on glucose in a pyruvate decarboxylase negative yeast strain
artículo científico publicado en 2015
Adaptively evolved yeast mutants on galactose show trade-offs in carbon utilization on glucose
artículo científico publicado en 2013
Addressing the pooled amplification paradox with unique molecular identifiers in single-cell RNA-seq
artículo científico publicado en 2020
Adipose tissue resting energy expenditure and expression of genes involved in mitochondrial function are higher in women than in men.
artículo científico publicado en 2012
Advanced biofuel production by the yeast Saccharomyces cerevisiae
artículo científico publicado en 2013
Advances in metabolic engineering of yeast Saccharomyces cerevisiae for production of chemicals
artículo científico publicado en 2014
Advances in metabolic pathway and strain engineering paving the way for sustainable production of chemical building blocks
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artículo científico publicado el 28 de marzo de 2013
Advancing biotechnology with CRISPR/Cas9: recent applications and patent landscape
artículo científico publicado en 2018
Advancing metabolic engineering through systems biology of industrial microorganisms
artículo científico
Aerobic and anaerobic ethanol production by Mucor circinelloides during submerged growth
artículo científico publicado en 2003
Aerobic glucose metabolism of Saccharomyces kluyveri: growth, metabolite production, and quantification of metabolic fluxes
artículo científico publicado en 2002
Aerobic physiology of redox-engineered Saccharomyces cerevisiae strains modified in the ammonium assimilation for increased NADPH availability
artículo científico publicado en 2003
Affibody Scaffolds Improve Sesquiterpene Production in Saccharomyces cerevisiae
artículo científico publicado en 2016
Alleviation of glucose repression of maltose metabolism by MIG1 disruption in Saccharomyces cerevisiae
artículo científico publicado en 1996
Altering the expression of two chitin synthase genes differentially affects the growth and morphology of Aspergillus oryzae
artículo científico publicado en 2002
An Integrated Understanding of the Rapid Metabolic Benefits of a Carbohydrate-Restricted Diet on Hepatic Steatosis in Humans.
artículo científico publicado en 2018
An atlas of human metabolism
artículo científico publicado en 2020
An expanded role for microbial physiology in metabolic engineering and functional genomics: moving towards systems biology
artículo científico publicado el 1 de mayo de 2002
An improved FIA-system for measuring ?-amylase in cultivation media
Anaerobic and aerobic batch cultivations of Saccharomyces cerevisiae mutants impaired in glycerol synthesis
scientific article published on 01 March 2000
Anaerobic and aerobic batch cultivations of Saccharomyces cerevisiae mutants impaired in glycerol synthesis
artículo científico publicado en 2000
Anaerobic α-amylase production and secretion with fumarate as the final electron acceptor in Saccharomyces cerevisiae
artículo científico publicado en 2013
Analysis of Aspergillus nidulans metabolism at the genome-scale
artículo científico publicado en 2008
Analysis of Penicillin V biosynthesis during fed-batch cultivations with a high-yielding strain of Penicillium chrysogenum
artículo científico publicado en 1995
Analysis of acyl CoA ester intermediates of the mevalonate pathway in Saccharomyces cerevisiae
artículo científico publicado en 2004
Analysis of flux estimates based on (13)C-labelling experiments
artículo científico publicado en 2002
Analysis of genome-wide coexpression and coevolution of Aspergillus oryzae and Aspergillus niger
artículo científico
Analysis of gut microbial regulation of host gene expression along the length of the gut and regulation of gut microbial ecology through MyD88.
artículo científico publicado en 2011
Analysis of penicillin V biosynthesis during fed-batch cultivations with a high-yielding strain of Penicillium chrysogenum
artículo científico publicado en 1995
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics
artículo científico publicado en 2013
Analytical performance of a standardized kit for mass spectrometry-based measurements of human glycosaminoglycans
artículo científico publicado en 2021
Anomeric specificity of glucose uptake systems in Lactococcus cremoris, Escherichia coli, and Saccharomyces cerevisiae: mechanism, kinetics, and implications
artículo científico publicado en 1992
Antibiotic overproduction in Streptomyces coelicolor A3 2 mediated by phosphofructokinase deletion
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artículo científico publicado en 2008
Antisense silencing of the creA gene in Aspergillus nidulans.
artículo científico publicado en 2000
Applications of computational modeling in metabolic engineering of yeast
article
Architecture of transcriptional regulatory circuits is knitted over the topology of bio-molecular interaction networks
artículo científico publicado en 2008
Aspergilli: systems biology and industrial applications
artículo científico
Assessing the human gut microbiota in metabolic diseases
artículo científico publicado en 2013
Author Correction: A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism
artículo científico publicado en 2020
Author Correction: Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology
artículo científico publicado en 2020
Author Correction: Metabolic engineering of Saccharomyces cerevisiae for production of very long chain fatty acid-derived chemicals
artículo científico publicado en 2018
Autotrophic yeast
artículo científico publicado en 2024
BIOENGINEERING. Yeast cell factories on the horizon
artículo científico publicado en 2015
Balanced globin protein expression and heme biosynthesis improve production of human hemoglobin in Saccharomyces cerevisiae
artículo científico publicado en 2013
Balanced trafficking between the ER and the Golgi apparatus increases protein secretion in yeast
artículo científico publicado en 2018
Barriers and opportunities in bio-based production of hydrocarbons
article
Bayesian genome scale modelling identifies thermal determinants of yeast metabolism
artículo científico publicado en 2021
Benchmarking accuracy and precision of intensity-based absolute quantification of protein abundances in Saccharomyces cerevisiae
artículo científico publicado en 2020
Benchmarking accuracy and precision of intensity‐based absolute quantification of protein abundances in Saccharomyces cerevisiae
artículo científico publicado en 2021
BioMet Toolbox: genome-wide analysis of metabolism
artículo científico publicado en 2010
Biobased organic acids production by metabolically engineered microorganisms
artículo científico publicado en 2015
Biobased production of alkanes and alkenes through metabolic engineering of microorganisms
artículo científico publicado en 2016
Biofuels. Altered sterol composition renders yeast thermotolerant
artículo científico publicado en 2014
Biofuels: chimeric synthetic pathways
artículo científico publicado en 2011
Biosynthesis of glyoxylate from glycine in Saccharomyces cerevisiae
artículo científico publicado en 2005
Biosynthetic Studies of the Glycopeptide Teicoplanin by1H and13C NMR
artículo científico publicado en 2000
Brain energy metabolism is optimized to minimize the cost of enzyme synthesis and transport
artículo científico publicado en 2024
Brain energy metabolism is optimized to minimize the cost of enzyme synthesis and transport
artículo científico publicado en 2022
Branching is coordinated with mitosis in growing hyphae of Aspergillus nidulans
artículo científico publicado en 2003
Bridging the gaps in systems biology
artículo científico publicado en 2014
Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity
artículo científico publicado en 2017
Building blocks are synthesized on demand during the yeast cell cycle
artículo científico publicado en 2020
CODY enables quantitatively spatiotemporal predictions on in vivo gut microbial variability induced by diet intervention
artículo científico publicado en 2021
Can yeast systems biology contribute to the understanding of human disease?
artículo científico publicado en 2008
Cancer Metabolism: A Modeling Perspective
artículo científico publicado en 2015
Carbon catabolite repression of invertase during batch cultivations of Saccharomyces cerevisiae : the role of glucose, fructose, and mannose
artículo científico publicado en 1998
Cell factory engineering for improved production of natural products
article
Challenges in modeling the human gut microbiome
scientific article published on 01 August 2018
Changes in lipid metabolism convey acid tolerance in
Changes of in vivo fluxes through central metabolic pathways during the production of nystatin by Streptomyces noursei in batch culture
artículo científico publicado en 2001
Characterisation of the Mucor circinelloides regulated promoter gpd1P.
artículo científico publicado en 2004
Characterization of chromosomal integration sites for heterologous gene expression in Saccharomyces cerevisiae
scientific article published on 01 October 2009
Characterization of cross-species transcription and splicing from Penicillium to Saccharomyces cerevisiae
artículo científico publicado en 2021
Characterization of different promoters for designing a new expression vector in Saccharomyces cerevisiae
artículo científico publicado en 2010
Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression saccharomyces cerevisiae strains: the comparison of two quantitative methods
artículo científico publicado en 2008
Characterization of heterogeneous redox responses in hepatocellular carcinoma patients using network analysis.
artículo científico publicado en 2018
Characterization of mixing in stirred tank bioreactors equipped with rushton turbines
artículo científico publicado en 1994
Characterization of the Mucor circinelloides life cycle by on-line image analysis
artículo científico publicado en 2003
Chromosome 3p loss of heterozygosity is associated with a unique metabolic network in clear cell renal carcinoma
artículo científico publicado en 2014
Cleanup and Analysis of Sugar Phosphates in Biological Extracts by Using Solid-Phase Extraction and Anion-Exchange Chromatography with Pulsed Amperometric Detection
artículo científico publicado en 1998
Cloning and characterization of oah, the gene encoding oxaloacetate hydrolase in Aspergillus niger
artículo científico publicado en 2000
Cocoa butter-like lipid production ability of non-oleaginous and oleaginous yeasts under nitrogen-limited culture conditions
artículo científico publicado en 2017
Codon usage variability determines the correlation between proteome and transcriptome fold changes
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artículo científico publicado el 25 de febrero de 2011
Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients
artículo científico publicado en 2021
Combined metabolic engineering of precursor and co-factor supply to increase α-santalene production by Saccharomyces cerevisiae
artículo científico publicado en 2012
Combining substrate specificity analysis with support vector classifiers reveals feruloyl esterase as a phylogenetically informative protein group
artículo científico publicado en 2010
Comparative Transcriptome Analysis Shows Conserved Metabolic Regulation during Production of Secondary Metabolites in Filamentous Fungi
Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88
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artículo científico publicado en 2011
Comparative genomics study reveals Red Sea Bacillus with characteristics associated with potential microbial cell factories (MCFs)
scientific article published on 17 December 2019
Comparative metabolic capabilities for Micrococcus luteus NCTC 2665, the "Fleming" strain, and actinobacteria
artículo científico publicado en 2011
Comparative metabolic network analysis of two xylose fermenting recombinant Saccharomyces cerevisiae strains
artículo científico publicado en 2005
Comparative transcriptomic approach to investigate differences in wine yeast physiology and metabolism during fermentation
artículo científico publicado en 2009
Comparison of the metabolic response to over-production of p-coumaric acid in two yeast strains.
artículo científico publicado en 2017
Compartment model concept used in the design of fermentation with recombinant microorganisms
artículo científico publicado en 1989
Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D.
artículo científico publicado en 2018
Complex I is bypassed during high intensity exercise
scientific article published on 07 November 2019
Computational biology predicts metabolic engineering targets for increased production of 102 valuable chemicals in yeast
artículo científico publicado en 2023
Constraint-based modeling of yeast mitochondria reveals the dynamics of protein import and iron-sulfur cluster biogenesis
artículo científico publicado en 2021
Construction and characterization of an oxalic acid nonproducing strain of Aspergillus niger
artículo científico publicado en 2000
Construction of Mini-Chemostats for High-throughput Strain Characterization
artículo científico publicado en 2019
Continuous cultivation of Penicillium chrysogenum. Growth on glucose and penicillin production
artículo científico publicado en 1995
Continuous cultivations of a Penicillium chrysogenum strain expressing the expandase gene from Streptomyces clavuligerus: Growth yields and morphological characterization
artículo científico publicado en 2003
Control of fluxes towards antibiotics and the role of primary metabolism in production of antibiotics
artículo científico publicado en 2004
Controllability analysis of transcriptional regulatory networks reveals circular control patterns among transcription factors
artículo científico publicado en 2015
Correlation of cell growth and heterologous protein production by Saccharomyces cerevisiae.
artículo científico publicado en 2013
Coupled incremental precursor and co-factor supply improves 3-hydroxypropionic acid production in Saccharomyces cerevisiae
artículo científico publicado en 2014
CreA influences the metabolic fluxes of Aspergillus nidulans during growth on glucose and xylose
artículo científico publicado en 2005
Current Status of COVID-19 Therapies and Drug Repositioning Applications
artículo científico publicado en 2020
Current status of systems biology in Aspergilli
artículo científico publicado en 2008
Cyclization of alpha-aminoadipic acid into the the delta-lactam 6-oxo-piperidine-2-carboxylic acid by Penicillium chrysogenum
artículo científico publicado en 1998
DCEO Biotechnology: Tools To Design, Construct, Evaluate, and Optimize the Metabolic Pathway for Biosynthesis of Chemicals.
artículo científico publicado en 2017
De novo biosynthesis of bioactive isoflavonoids by engineered yeast cell factories
artículo científico publicado en 2021
De novo production of protoberberine and benzophenanthridine alkaloids through metabolic engineering of yeast
artículo científico publicado en 2024
De novo production of resveratrol from glucose or ethanol by engineered Saccharomyces cerevisiae
artículo científico publicado en 2015
De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology
artículo científico publicado en 2012
Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure
artículo científico publicado en 2020
Deep learning-based kcat prediction enables improved enzyme-constrained model reconstruction
artículo científico publicado en 2022
Defining the human adipose tissue proteome to reveal metabolic alterations in obesity
artículo científico publicado en 2014
Defining the human gallbladder proteome by transcriptomics and affinity proteomics
scholarly article by Caroline Kampf published in October 2014
Degradation of pencillin-V in fermentation media
artículo científico publicado en 1994
Deletion of RTS1, encoding a regulatory subunit of protein phosphatase 2A, results in constitutive amino acid signaling via increased Stp1p processing
artículo científico publicado en 2006
Derepression of galactose metabolism in melibiase producing bakers' and distillers' yeast.
artículo científico publicado en 1999
Design and application of genome-scale reconstructed metabolic models
artículo científico publicado en 2008
Development of fungal cell factories for the production of secondary metabolites: Linking genomics and metabolism
artículo científico publicado en 2017
Different Routes of Protein Folding Contribute to Improved Protein Production in Saccharomyces cerevisiae
artículo científico publicado en 2020
Different expression systems for production of recombinant proteins in Saccharomyces cerevisiae
artículo científico publicado en 2012
Discriminating Benign from Malignant Lung Diseases Using Plasma Glycosaminoglycans and Cell-Free DNA
artículo científico publicado en 2024
Disruption of the NADPH-dependent glutamate dehydrogenase affects the morphology of two industrial strains of Penicillium chrysogenum
artículo científico publicado en 2009
Diversion of flux toward sesquiterpene production in Saccharomyces cerevisiae by fusion of host and heterologous enzymes
artículo científico publicado en 2010
Do genome-scale models need exact solvers or clearer standards?
artículo científico publicado en 2015
Draft Genome Sequences of Five Fungal Strains Isolated from Kefir
artículo científico publicado en 2021
Drug Repositioning for Effective Prostate Cancer Treatment
artículo científico publicado en 2018
Dynamic Metabolic Footprinting Reveals the Key Components of Metabolic Network in Yeast Saccharomyces cerevisiae
artículo científico publicado en 2014
Dynamic control of gene expression in Saccharomyces cerevisiae engineered for the production of plant sesquitepene α-santalene in a fed-batch mode
artículo científico publicado en 2012
Dynamic engineering of 1-alkenes biosynthesis and secretion in yeast
artículo científico publicado en 2017
Dynamic regulation of fatty acid pools for improved production of fatty alcohols in Saccharomyces cerevisiae
artículo científico publicado en 2017
Dynamic13C-labeling experiments prove important differences in protein turnover rate between twoSaccharomyces cerevisiaestrains
artículo científico publicado en 2012
Dysregulated autophagy in muscle precursor cells from humans with type 2 diabetes.
artículo científico publicado en 2019
Dysregulated signaling hubs of liver lipid metabolism reveal hepatocellular carcinoma pathogenesis
artículo científico publicado en 2016
EasyClone: method for iterative chromosomal integration of multiple genes in Saccharomyces cerevisiae
artículo científico publicado en 2013
EasyCloneMulti: A Set of Vectors for Simultaneous and Multiple Genomic Integrations in Saccharomyces cerevisiae
artículo científico publicado en 2016
Economic and environmental impacts of microbial biodiesel
artículo científico publicado en 2013
Editorial
Editorial: Industrial systems biology
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artículo científico publicado el 1 de marzo de 2011
Editorial: Jurij Piškur (1960-2014).
artículo científico publicado en 2015
Editorial: The Impact of Systems Medicine on Human Health and Disease
artículo científico publicado en 2016
Editorial: Where is scientific publishing heading?
artículo científico publicado en 2017
Editorial: yeast synthetic biology
artículo científico publicado en 2020
Effect of carbon source perturbations on transcriptional regulation of metabolic fluxes in Saccharomyces cerevisiae
artículo científico publicado en 2007
Effect of deletion of chitin synthase genes on mycelial morphology and culture viscosity in Aspergillus oryzae
artículo científico publicado en 2003
Effects of acetoacetyl-CoA synthase expression on production of farnesene in Saccharomyces cerevisiae
artículo científico publicado en 2017
Effects of nitrogen sources on cell growth and production of nystatin by Streptomyces noursei
scientific article published on 01 December 2000
Efficient protein production by yeast requires global tuning of metabolism
artículo científico publicado en 2017
Elucidating aromatic acid tolerance at low pH in Saccharomyces cerevisiae using adaptive laboratory evolution
artículo científico publicado en 2020
Elucidating the interactions between the human gut microbiota and its host through metabolic modeling
artículo científico publicado en 2014
Elucidating the mode-of-action of compounds from metabolite profiling studies
artículo científico publicado en 2007
Elucidation of the role of Grr1p in glucose sensing by Saccharomyces cerevisiae through genome-wide transcription analysis
artículo científico publicado en 2004
Enabling technologies to advance microbial isoprenoid production
artículo científico
Enabling the synthesis of medium chain alkanes and 1-alkenes in yeast
artículo científico publicado en 2017
Energy metabolism controls phenotypes by protein efficiency and allocation
artículo científico publicado en 2019
Engineering Cellular Metabolism
artículo científico publicado en 2016
Engineering Lipid Droplet Assembly Mechanisms for Improved Triacylglycerols Accumulation inS. cerevisiae
Engineering Robustness of Microbial Cell Factories
artículo científico publicado en 2017
Engineering Saccharomyces cerevisiae cells for production of fatty acid-derived biofuels and chemicals.
artículo científico publicado en 2019
Engineering and systems-level analysis of Saccharomyces cerevisiae for production of 3-hydroxypropionic acid via malonyl-CoA reductase-dependent pathway
artículo científico publicado en 2016
Engineering carboxylic acid reductase for selective synthesis of medium-chain fatty alcohols in yeast
scientific article published on 01 September 2020
Engineering central metabolism - a grand challenge for plant biologists
artículo científico publicado en 2016
Engineering lipid droplet assembly mechanisms for improved triacylglycerol accumulation in Saccharomyces cerevisiae
artículo científico publicado en 2018
Engineering of acetyl-CoA metabolism for the improved production of polyhydroxybutyrate in Saccharomyces cerevisiae
artículo científico publicado en 2012
Engineering of chromosomal wax ester synthase integrated Saccharomyces cerevisiae mutants for improved biosynthesis of fatty acid ethyl esters
artículo científico publicado en 2014
Engineering of synthetic, stress-responsive yeast promoters
artículo científico publicado en 2016
Engineering of vesicle trafficking improves heterologous protein secretion in Saccharomyces cerevisiae
artículo científico publicado en 2012
Engineering synergy in biotechnology
artículo científico
Engineering the oxygen sensing regulation results in an enhanced recombinant human hemoglobin production by Saccharomyces cerevisiae.
artículo científico publicado en 2014
Engineering the protein secretory pathway of enables improved protein production
article published in the Proceedings of the National Academy of Sciences of the United States of America
Engineering yeast for high-level production of stilbenoid antioxidants.
artículo científico publicado en 2016
Engineering yeast metabolism for production of terpenoids for use as perfume ingredients, pharmaceuticals and biofuels
artículo científico publicado en 2017
Engineering yeast metabolism for the discovery and production of polyamines and polyamine analogues
artículo científico publicado en 2021
Engineering yeast phospholipid metabolism for de novo oleoylethanolamide production
artículo científico publicado en 2019
Engineering yeast to produce plant-derived anti-obesity agent
artículo científico publicado en 2023
Enhanced amino acid utilization sustains growth of cells lacking Snf1/AMPK.
artículo científico publicado en 2015
Enhanced citrate production through gene insertion in Aspergillus niger
artículo científico publicado en 2007
Enhanced ethanol production and reduced glycerol formation in fps1∆ mutants of Saccharomyces cerevisiae engineered for improved redox balancing.
artículo científico publicado en 2014
Enhancement of farnesyl diphosphate pool as direct precursor of sesquiterpenes through metabolic engineering of the mevalonate pathway in Saccharomyces cerevisiae
artículo científico publicado en 2010
Enhancing sesquiterpene production in Saccharomyces cerevisiae through in silico driven metabolic engineering.
artículo científico publicado en 2009
Enhancing the copy number of episomal plasmids in Saccharomyces cerevisiae for improved protein production
artículo científico publicado en 2012
Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods
artículo científico publicado en 2013
Erratum to: A molecular genetic toolbox for Yarrowia lipolytica
artículo científico publicado en 2017
Establishing a platform cell factory through engineering of yeast acetyl-CoA metabolism
artículo científico publicado en 2012
Establishing a synthetic pathway for high-level production of 3-hydroxypropionic acid in Saccharomyces cerevisiae via β-alanine
artículo científico publicado en 2014
Establishing very long-chain fatty alcohol and wax ester biosynthesis in Saccharomyces cerevisiae
artículo científico publicado en 2016
Establishment of a yeast platform strain for production of p-coumaric acid through metabolic engineering of aromatic amino acid biosynthesis
artículo científico publicado en 2015
Evolution of the Metabolic Engineering Community
artículo científico publicado en 2018
Evolutionary engineering of Saccharomyces cerevisiae for efficient aerobic xylose consumption
artículo científico publicado en 2012
Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments.
artículo científico publicado en 2016
Evolutionary programming as a platform for in silico metabolic engineering
artículo científico publicado en 2005
Exercise suppresses tumor growth through epinephrine- and IL-6-dependent mobilization and redistribution of NK cells.
artículo científico publicado en 2015
Expanding the product portfolio of fungal type I fatty acid synthases
artículo científico publicado en 2017
Exploiting off-targeting in guide-RNAs for CRISPR systems for simultaneous editing of multiple genes
artículo científico publicado en 2017
Exploring the potential of Saccharomyces cerevisiae for biopharmaceutical protein production
artículo científico publicado en 2017
Expression of a cytoplasmic transhydrogenase in Saccharomyces cerevisiae results in formation of 2-oxoglutarate due to depletion of the NADPH pool
artículo científico publicado en 2001
Expression of cocoa genes in Saccharomyces cerevisiae improves cocoa butter production
artículo científico publicado en 2018
Expression of the Escherichia coli pntA and pntB genes, encoding nicotinamide nucleotide transhydrogenase, in Saccharomyces cerevisiae and its effect on product formation during anaerobic glucose fermentation.
artículo científico publicado en 1999
Extending the G1 phase improves the production of lipophilic compounds in yeast by boosting enzyme expression and increasing cell size
artículo científico publicado en 2024
Extensive weight loss reveals distinct gene expression changes in human subcutaneous and visceral adipose tissue
artículo científico publicado en 2015
FANTOM: Functional and taxonomic analysis of metagenomes
artículo científico publicado en 2013
FATTY ACID SYNTHESIS IS REQUIRED FOR BREAST CANCER BRAIN METASTASIS
artículo científico publicado en 2021
FEMS yeast research: the yeast community journal
artículo científico publicado en 2015
FIA for on-line monitoring of important lactic acid fermentation variables
artículo científico publicado en 1989
Fast and accurate preparation fatty acid methyl esters by microwave-assisted derivatization in the yeast Saccharomyces cerevisiae
artículo científico publicado en 2012
Fatty Acid-Derived Biofuels and Chemicals Production in Saccharomyces cerevisiae
artículo científico publicado en 2014
Fermentation performance and intracellular metabolite patterns in laboratory and industrial xylose-fermenting Saccharomyces cerevisiae
artículo científico publicado en 2002
Fifteen years of large scale metabolic modeling of yeast: developments and impacts
artículo científico
Finding directionality and gene-disease predictions in disease associations
artículo científico publicado en 2015
Flux Control at the Malonyl-CoA Node through Hierarchical Dynamic Pathway Regulation in Saccharomyces cerevisiae
artículo científico publicado en 2016
Flux balance analysis predicts essential genes in clear cell renal cell carcinoma metabolism
artículo científico publicado en 2015
Flux control through protein phosphorylation in yeast
artículo científico publicado en 2016
Flux distributions in anaerobic, glucose-limited continuous cultures of Saccharomyces cerevisiae
artículo científico publicado en 1997
From flavors and pharmaceuticals to advanced biofuels: production of isoprenoids in Saccharomyces cerevisiae
artículo científico publicado en 2013
From genomes to in silico cells via metabolic networks
artículo científico publicado en 2005
From glucose to antibiotics: what controls the fluxes?
artículo científico publicado en 2005
From next-generation sequencing to systematic modeling of the gut microbiome
artículo científico publicado en 2015
Fuel ethanol production from lignocellulose: a challenge for metabolic engineering and process integration.
artículo científico publicado en 2001
Functional expression and characterization of five wax ester synthases in Saccharomyces cerevisiae and their utility for biodiesel production
artículo científico publicado en 2012
Functional expression and evaluation of heterologous phosphoketolases in Saccharomyces cerevisiae
artículo científico publicado en 2016
Functional pyruvate formate lyase pathway expressed with two different electron donors in Saccharomyces cerevisiae at aerobic growth
artículo científico publicado en 2015
Functional screening of aldehyde decarbonylases for long-chain alkane production by Saccharomyces cerevisiae
artículo científico publicado en 2017
Fungal genomics beyond Saccharomyces cerevisiae?
artículo científico publicado en 2003
Fungal metabolite analysis in genomics and phenomics
artículo científico publicado en 2006
Galactose Expulsion during Lactose Metabolism in Lactococcus lactis subsp. cremoris FD1 Due to Dephosphorylation of Intracellular Galactose 6-Phosphate
artículo científico publicado en 1994
Gcn4p and the Crabtree effect of yeast: drawing the causal model of the Crabtree effect in Saccharomyces cerevisiae and explaining evolutionary trade-offs of adaptation to galactose through systems biology
article
Gene deletion of cytosolic ATP: citrate lyase leads to altered organic acid production in Aspergillus niger
artículo científico publicado en 2009
Generation and analysis of context-specific genome-scale metabolic models derived from single-cell RNA-Seq data
artículo científico publicado en 2023
Generation and analysis of context-specific genome-scale metabolic models derived from single-cell RNA-Seq data
artículo científico publicado en 2022
Genetic and nutrient modulation of acetyl-CoA levels in Synechocystis for n-butanol production
artículo científico publicado en 2015
Genetically structured modeling of protein production in filamentous fungi
article
Genetically structured modeling of protein production in filamentous fungi
artículo científico publicado en 1999
Genome scale metabolic modeling of cancer
artículo científico publicado en 2016
Genome scale metabolic modeling of the riboflavin overproducer Ashbya gossypii
artículo científico publicado en 2013
Genome scale models of yeast: towards standardized evaluation and consistent omic integration
artículo científico
Genome-Wide Mapping of Binding Sites Reveals Multiple Biological Functions of the Transcription Factor Cst6p in Saccharomyces cerevisiae
artículo científico publicado en 2016
Genome-scale analysis of Streptomyces coelicolor A3(2) metabolism
artículo científico publicado en 2005
Genome-scale analysis of the high-efficient protein secretion system of Aspergillus oryzae
artículo científico publicado en 2014
Genome-scale metabolic model of Pichia pastoris with native and humanized glycosylation of recombinant proteins
artículo científico publicado en 2015
Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease
artículo científico publicado en 2014
Genome-scale metabolic models applied to human health and disease
artículo científico publicado en 2017
Genome-scale metabolic models of Saccharomyces cerevisiae
artículo científico publicado en 2011
Genome-scale metabolic reconstructions of Bifidobacterium adolescentis L2-32 and Faecalibacterium prausnitzii A2-165 and their interaction
artículo científico publicado en 2014
Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials
artículo científico publicado en 2012
Genome-scale metabolic representation of Amycolatopsis balhimycina
artículo científico publicado en 2012
Genome-scale model of Rhodotorula toruloides metabolism
Genome-scale modeling drives 70-fold improvement of intracellular heme production in Saccharomyces cerevisiae
artículo científico publicado en 2022
Genome-scale modeling enables metabolic engineering of Saccharomyces cerevisiae for succinic acid production
scientific article published on 23 April 2013
Genome-scale modeling of human metabolism - a systems biology approach
artículo científico publicado en 2013
Genome-scale modeling of the protein secretory machinery in yeast
artículo científico publicado en 2013
Genome-scale modeling of yeast metabolism: retrospectives and perspectives
artículo científico publicado en 2022
Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network
artículo científico publicado en 2003
Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
scientific article published on 02 January 2020
Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
Genome-wide analysis of maltose utilization and regulation in aspergilli
artículo científico publicado en 2009
Genome-wide transcriptional response of a Saccharomyces cerevisiae strain with an altered redox metabolism
artículo científico publicado en 2004
Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species
artículo científico publicado en 2017
Global metabolite analysis of yeast: evaluation of sample preparation methods
artículo científico publicado en 2005
Global rewiring of cellular metabolism renders Saccharomyces cerevisiae Crabtree negative
artículo científico publicado en 2018
Global transcriptional response of Saccharomyces cerevisiae to the deletion of SDH3.
artículo científico publicado en 2009
Glucoamylase production in batch, chemostat and fed-batch cultivations by an industrial strain of Aspergillus niger
artículo científico publicado en 2000
Glucose control in Saccharomyces cerevisiae: the role of Mig1 in metabolic functions
artículo científico publicado en 1998
Glucose metabolism in the antibiotic producing actinomycete Nonomuraea sp. ATCC 39727.
artículo científico publicado en 2004
Glucose repression in Saccharomyces cerevisiae
artículo científico publicado en 2015
Glucose-Dependent Promoters for Dynamic Regulation of Metabolic Pathways.
artículo científico publicado en 2018
Glycosaminoglycan Profiling in Patients' Plasma and Urine Predicts the Occurrence of Metastatic Clear Cell Renal Cell Carcinoma
artículo científico publicado en 2016
GotEnzymes: an extensive database of enzyme parameter predictions
artículo científico publicado en 2023
Growth and product formation of Aspergillus oryzae during submerged cultivations: Verification of a morphologically structured model using fluorescent probes
article
Growth and production kinetics of a teicoplanin producing strain of Actinoplanes teichomyceticus
article
Growth energetics and metabolic fluxes in continuous cultures of Penicillium chrysogenum
article
Growth physiology and dimorphism of Mucor circinelloides (syn. racemosus) during submerged batch cultivation
artículo científico publicado en 2002
Growth temperature exerts differential physiological and transcriptional responses in laboratory and wine strains of Saccharomyces cerevisiae
artículo científico publicado en 2008
Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae
artículo científico publicado en 2006
Grr1p is required for transcriptional induction of amino acid permease genes and proper transcriptional regulation of genes in carbon metabolism of Saccharomyces cerevisiae
artículo científico publicado en 2004
Guidelines and recommendations on yeast cell death nomenclature.
artículo científico publicado en 2018
Gut metagenome in European women with normal, impaired and diabetic glucose control
artículo científico publicado en 2013
Gut microbiota dysbiosis is associated with malnutrition and reduced plasma amino acid levels: Lessons from genome-scale metabolic modeling
artículo científico publicado en 2018
HCSD: the human cancer secretome database
artículo científico publicado en 2015
HGTphyloDetect: facilitating the identification and phylogenetic analysis of horizontal gene transfer
artículo científico publicado en 2023
Hap4 is not essential for activation of respiration at low specific growth rates in Saccharomyces cerevisiae.
artículo científico publicado en 2006
Harnessing Yeast Peroxisomes for Biosynthesis of Fatty-Acid-Derived Biofuels and Chemicals with Relieved Side-Pathway Competition
artículo científico publicado en 2016
Harnessing synthetic biology for mushroom farming
artículo científico publicado en 2023
Harnessing xylose pathways for biofuels production
article
Heat shock response improves heterologous protein secretion in Saccharomyces cerevisiae
artículo científico publicado en 2012
Heme metabolism in stress regulation and protein production: From Cinderella to a key player
artículo científico publicado en 2016
Heterologous production of non-ribosomal peptide LLD-ACV in Saccharomyces cerevisiae
artículo científico publicado en 2009
Heterologous production of polyunsaturated fatty acids in Saccharomyces cerevisiae causes a global transcriptional response resulting in reduced proteasomal activity and increased oxidative stress
artículo científico publicado en 2010
Heterologous transporter expression for improved fatty alcohol secretion in yeast
artículo científico publicado en 2017
High-Throughput Microfluidics for the Screening of Yeast Libraries
artículo científico publicado en 2018
High-throughput metabolic state analysis: the missing link in integrated functional genomics of yeasts.
artículo científico publicado en 2005
High-throughput screening for industrial enzyme production hosts by droplet microfluidics.
artículo científico publicado en 2014
How to set up collaborations between academia and industrial biotech companies
artículo científico publicado en 2015
Human gut microbiota and healthy aging: Recent developments and future prospective
artículo científico publicado en 2016
Human metabolic atlas: an online resource for human metabolism
artículo científico publicado en 2015
Human protein secretory pathway genes are expressed in a tissue-specific pattern to match processing demands of the secretome
artículo científico
Hyphal growth and fragmentation of Penicillium chrysogenum in submerged cultures
article
Identification and treatment of heme depletion attributed to overexpression of a lineage of evolved P450 monooxygenases
artículo científico publicado en 2012
Identification of a novel gene required for competitive growth at high temperature in the thermotolerant yeast
artículo científico publicado en 2022
Identification of anticancer drugs for hepatocellular carcinoma through personalized genome-scale metabolic modeling
artículo científico publicado en 2014
Identification of enzymes and quantification of metabolic fluxes in the wild type and in a recombinant aspergillus oryzae strain
artículo científico publicado en 1999
Identification of flux control in metabolic networks using non-equilibrium thermodynamics
scientific article published on 17 March 2010
Identification of flux regulation coefficients from elementary flux modes: A systems biology tool for analysis of metabolic networks
artículo científico publicado en 2007
Identification of in vivo enzyme activities in the cometabolism of glucose and acetate by Saccharomyces cerevisiae by using 13C-labeled substrates
artículo científico publicado en 2003
Identification of the Entner-Doudoroff pathway in an antibiotic-producing actinomycete species.
artículo científico publicado en 2004
Identification of the decumbenone biosynthetic gene cluster in and the importance for production of calbistrin
article
Identifying anti-growth factors for human cancer cell lines through genome-scale metabolic modeling.
artículo científico publicado en 2015
Identifying molecular effects of diet through systems biology: influence of herring diet on sterol metabolism and protein turnover in mice
artículo científico publicado en 2010
Imbalance of heterologous protein folding and disulfide bond formation rates yields runaway oxidative stress
artículo científico publicado en 2012
Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology
artículo científico publicado en 2020
Impact of 'ome' analyses on inverse metabolic engineering
artículo científico publicado en 2004
Impact of forced fatty acid synthesis on metabolism and physiology of Saccharomyces cerevisiae
artículo científico publicado en 2018
Impact of protein uptake and degradation on recombinant protein secretion in yeast
artículo científico publicado en 2014
Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals
artículo científico publicado en 2015
Impact of systems biology on metabolic engineering of Saccharomyces cerevisiae
artículo científico publicado en 2007
Impact of transamination reactions and protein turnover on labeling dynamics in (13)C-labeling experiments
artículo científico publicado en 2004
Implementation of communication-mediating domains for non-ribosomal peptide production in Saccharomyces cerevisiae
artículo científico publicado en 2010
Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae
artículo científico publicado en 2008
Improved polyhydroxybutyrate production by Saccharomyces cerevisiae through the use of the phosphoketolase pathway
artículo científico publicado en 2013
Improved production of a heterologous amylase in Saccharomyces cerevisiae by inverse metabolic engineering
artículo científico publicado en 2014
Improved production of fatty acid ethyl esters in Saccharomyces cerevisiae through up-regulation of the ethanol degradation pathway and expression of the heterologous phosphoketolase pathway
artículo científico publicado en 2014
Improved production of fatty acids by Saccharomyces cerevisiae through screening a cDNA library from the oleaginous yeast Yarrowia lipolytica
artículo científico publicado en 2015
Improved quantification of farnesene during microbial production from Saccharomyces cerevisiae in two-liquid-phase fermentations
artículo científico publicado en 2015
Improvement of galactose uptake in Saccharomyces cerevisiae through overexpression of phosphoglucomutase: example of transcript analysis as a tool in inverse metabolic engineering
artículo científico publicado en 2005
Improving biobutanol production in engineered Saccharomyces cerevisiae by manipulation of acetyl-CoA metabolism
artículo científico publicado en 2013
Improving heterologous protein secretion at aerobic conditions by activating hypoxia-induced genes in Saccharomyces cerevisiae
artículo científico publicado en 2015
Improving production of malonyl coenzyme A-derived metabolites by abolishing Snf1-dependent regulation of Acc1
artículo científico publicado en 2014
Improving recombinant protein production by yeast through genome-scale modeling using proteome constraints
artículo científico publicado en 2022
Improving the economics of NASH/NAFLD treatment through the use of systems biology
artículo científico publicado en 2017
Improving the phenotype predictions of a yeast genome-scale metabolic model by incorporating enzymatic constraints
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artículo científico
In search for symmetries in the metabolism of cancer
artículo científico publicado en 2015
In silico aided metabolic engineering of Saccharomyces cerevisiae for improved bioethanol production
artículo científico publicado en 2005
In silico genome-scale reconstruction and validation of the Corynebacterium glutamicum metabolic network
artículo científico publicado en 2009
In vitro co-cultures of human gut bacterial species as predicted from co-occurrence network analysis.
artículo científico publicado en 2018
In vitro turnover numbers do not reflect in vivo activities of yeast enzymes
artículo científico publicado en 2021
In vivo analysis of the viable microbiota and Helicobacter pylori transcriptome in gastric infection and early stages of carcinogenesis
artículo científico publicado en 2017
In vivo dynamics of galactose metabolism in Saccharomyces cerevisiae: metabolic fluxes and metabolite levels.
artículo científico publicado en 2001
Increased CO2 fixation enables high carbon-yield production of 3-hydroxypropionic acid in yeast
artículo científico publicado en 2024
Increased glycopeptide production after overexpression of shikimate pathway genes being part of the balhimycin biosynthetic gene cluster
artículo científico publicado en 2010
Increasing NADH oxidation reduces overflow metabolism in Saccharomyces cerevisiae
artículo científico publicado en 2007
Increasing cocoa butter-like lipid production of Saccharomyces cerevisiae by expression of selected cocoa genes
artículo científico publicado en 2017
Increasing galactose consumption by Saccharomyces cerevisiae through metabolic engineering of the GAL gene regulatory network
article
Induction and repression of alpha-amylase production in batch and continuous cultures of Aspergillus oryzae
article
Industrial glucoamylase fed-batch benefits from oxygen limitation and high osmolarity
scientific article published on 18 August 2011
Industrial systems biology
artículo científico publicado en 2010
Industrial systems biology and its impact on synthetic biology of yeast cell factories
artículo científico publicado en 2015
Industrial systems biology of Saccharomyces cerevisiae enables novel succinic acid cell factory
artículo científico publicado en 2013
Influence of carbon source on alpha-amylase production by Aspergillus oryzae
artículo científico publicado en 2001
Influence of the Dissolved Oxygen Concentration on the Penicillin Biosynthetic Pathway in Steady-State Cultures of Penicillium chrysogenum
article
Influence of the adipate and dissolved oxygen concentrations on the beta-lactam production during continuous cultivations of a Penicillium chrysogenum strain expressing the expandase gene from Streptomyces clavuligerus
artículo científico publicado en 2003
Innovation trends in industrial biotechnology
artículo científico publicado en 2022
Integrated Metabolic Modeling, Culturing, and Transcriptomics Explain Enhanced Virulence of Vibrio cholerae during Coinfection with Enterotoxigenic Escherichia coli
artículo científico publicado en 2020
Integrated Network Analysis Reveals an Association between Plasma Mannose Levels and Insulin Resistance
artículo científico publicado en 2016
Integrated analysis of the global transcriptional response to α-amylase over-production by Aspergillus oryzae
artículo científico publicado en 2010
Integrated analysis of the yeast NADPH-regulator Stb5 reveals distinct differences in NADPH requirements and regulation in different states of yeast metabolism
scientific article published on 01 December 2018
Integrated analysis of transcriptome and lipid profiling reveals the co-influences of inositol-choline and Snf1 in controlling lipid biosynthesis in yeast
artículo científico publicado en 2012
Integrated analysis, transcriptome-lipidome, reveals the effects of INO-level (INO2 and INO4) on lipid metabolism in yeast
artículo científico publicado en 2013
Integrated metabolic modeling, culturing and transcriptomics explains enhanced virulence of V. cholerae during co-infection with ETEC
artículo científico publicado en 2020
Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains
artículo científico publicado en 2010
Integration of clinical data with a genome-scale metabolic model of the human adipocyte
artículo científico publicado en 2013
Integration of gene expression data into genome-scale metabolic models
artículo científico publicado en 2004
Integrative analysis of human omics data using biomolecular networks
artículo científico publicado en 2016
Integrative analysis using proteome and transcriptome data from yeast to unravel regulatory patterns at post-transcriptional level
artículo científico publicado en 2010
Integrative functional analysis uncovers metabolic differences between Candida species
artículo científico publicado en 2022
Intracellular metabolite profiling of Fusarium oxysporum converting glucose to ethanol
artículo científico publicado en 2004
Investigation of malic acid production in Aspergillus oryzae under nitrogen starvation conditions
artículo científico publicado en 2013
Investigation of putative regulatory acetylation sites in Fas2p of Saccharomyces cerevisiae
Investigation of the impact of MIG1 and MIG2 on the physiology of Saccharomyces cerevisiae
artículo científico publicado en 1999
Isotopomer analysis using GC-MS.
artículo científico publicado en 1999
It is all about metabolic fluxes
artículo científico publicado en 2003
Kinetic models in industrial biotechnology - Improving cell factory performance
artículo científico
Kinetic studies of acid-inactivation of α-amylase from Aspergillus oryzae
Kinetic studies on the carboxylation of 6-amino-penicillanic acid to 8-hydroxy-penillic acid
scientific article published in 1997
Kinetics of alpha-amylase secretion in Aspergillus oryzae
artículo científico publicado en 1999
Kinetics of α-amylase secretion in Aspergillus oryzae
Kiwi: a tool for integration and visualization of network topology and gene-set analysis
artículo científico publicado en 2014
Large-scale evaluation of in silico gene deletions in Saccharomyces cerevisiae
artículo científico publicado en 2003
Learning deep representations of enzyme thermal adaptation
artículo científico publicado en 2022
Learning deep representations of enzyme thermal adaptation
artículo científico publicado en 2022
Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica
artículo científico publicado en 2017
Linking genotype and phenotype of Saccharomyces cerevisiae strains reveals metabolic engineering targets and leads to triterpene hyper-producers.
artículo científico publicado en 2011
Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p
scholarly article
Lipase production by recombinant strains of Aspergillus niger expressing a lipase-encoding gene from Thermomyces lanuginosus
artículo científico publicado en 2004
Lipid biosynthesis monitored at the single-cell level in Saccharomyces cerevisiae
artículo científico publicado en 2011
Lipid engineering combined with systematic metabolic engineering of Saccharomyces cerevisiae for high-yield production of lycopene
artículo científico publicado en 2019
Logical transformation of genome-scale metabolic models for gene level applications and analysis.
artículo científico publicado en 2015
Long-chain alkane production by the yeast Saccharomyces cerevisiae
artículo científico publicado en 2015
MEMOTE for standardized genome-scale metabolic model testing
artículo científico publicado en 2020
Machine learning-based investigation of the cancer protein secretory pathway
artículo científico publicado en 2021
Machine learning-based investigation of the cancer protein secretory pathway
artículo científico publicado en 2020
Maintaining a strong yeast research community
artículo científico publicado en 2014
Management of the endoplasmic reticulum stress by activation of the heat shock response in yeast
artículo científico publicado en 2013
Manipulation of malic enzyme in Saccharomyces cerevisiae for increasing NADPH production capacity aerobically in different cellular compartments.
artículo científico publicado en 2004
Mapping condition-dependent regulation of lipid metabolism in Saccharomyces cerevisiae
artículo científico publicado en 2013
Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling
artículo científico publicado en 2013
Mapping global effects of the anti-sigma factor MucA in Pseudomonas fluorescens SBW25 through genome-scale metabolic modeling
artículo científico publicado en 2013
Mapping the interaction of Snf1 with TORC1 in Saccharomyces cerevisiae
artículo científico publicado en 2011
Mapping the polysaccharide degradation potential of Aspergillus niger
artículo científico publicado en 2012
Mass spectrometry in metabolome analysis.
artículo científico publicado en 2005
Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices
artículo científico publicado en 2021
Mathematical models of cell factories: moving towards the core of industrial biotechnology
artículo científico publicado en 2011
Measurement of ?-amylase activity by Sequential Injection Analysis
Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite
Meta-analysis of the gut microbiota in predicting response to cancer immunotherapy in metastatic melanoma
scientific article published on 03 December 2020
Metabolic Models of Protein Allocation Call for the Kinetome
artículo científico publicado en 2017
Metabolic Needs and Capabilities of Toxoplasma gondii through Combined Computational and Experimental Analysis
artículo científico publicado en 2015
Metabolic Network-Based Identification and Prioritization of Anticancer Targets Based on Expression Data in Hepatocellular Carcinoma
Metabolic Trade-offs in Yeast are Caused by F1F0-ATP synthase
artículo científico publicado en 2016
Metabolic characterization of high- and low-yielding strains of Penicillium chrysogenum
scientific article published on 01 August 2000
Metabolic collaboration between cells in the tumor microenvironment has a negligible effect on tumor growth
artículo científico publicado en 2024
Metabolic collaboration between cells in the tumor microenvironment has a negligible effect on tumor growth
artículo científico publicado en 2022
Metabolic control analysis of biochemical pathways based on a thermokinetic description of reaction rates
artículo científico publicado en 1997
Metabolic control analysis of the penicillin biosynthetic pathway in a high-yielding strain of Penicillium chrysogenum
artículo científico publicado en 1995
Metabolic control analysis of the penicillin biosynthetic pathway: the influence of the LLD-ACV:bisACV ratio on the flux control
artículo científico publicado en 1999
Metabolic control analysis of xylose catabolism in Aspergillus
artículo científico publicado en 2003
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community
artículo científico publicado en 2021
Metabolic engineering
artículo científico publicado en 2001
Metabolic engineering and transcriptomic analysis of Saccharomyces cerevisiae producing p-coumaric acid from xylose
artículo científico publicado en 2019
Metabolic engineering frontiers emerging with advanced tools and methodologies
artículo científico publicado en 2017
Metabolic engineering of Saccharomyces cerevisiae
artículo científico publicado en 2000
Metabolic engineering of Saccharomyces cerevisiae for overproduction of triacylglycerols.
artículo científico publicado en 2018
Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived hydrocarbons
article
Metabolic engineering of Saccharomyces cerevisiae for production of germacrene A, a precursor of beta-elemene
artículo científico publicado en 2017
Metabolic engineering of Saccharomyces cerevisiae for production of very long chain fatty acid-derived chemicals
artículo científico publicado en 2017
Metabolic engineering of Saccharomyces cerevisiae: a key cell factory platform for future biorefineries
artículo científico
Metabolic engineering of ammonium assimilation in xylose-fermenting Saccharomyces cerevisiae improves ethanol production.
artículo científico publicado en 2003
Metabolic engineering of beta-lactam production
artículo científico publicado en 2003
Metabolic engineering of recombinant protein secretion by Saccharomyces cerevisiae
artículo científico
Metabolic engineering of the morphology of Aspergillus oryzae by altering chitin synthesis
artículo científico publicado en 2002
Metabolic engineering of the morphology of Aspergillus.
artículo científico publicado en 2001
Metabolic engineering of yeast for fermentative production of flavonoids
artículo científico publicado en 2017
Metabolic engineering of yeast for production of fuels and chemicals
artículo científico publicado en 2013
Metabolic engineering strategies for microbial synthesis of oleochemicals
artículo científico
Metabolic engineering, synthetic biology and systems biology
scientific article published on 04 January 2012
Metabolic engineering: techniques for analysis of targets for genetic manipulations
artículo científico publicado en 1998
Metabolic flux distributions in Penicillium chrysogenum during fed-batch cultivations
artículo científico publicado en 1995
Metabolic footprinting in microbiology: methods and applications in functional genomics and biotechnology
artículo científico publicado en 2008
Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger
artículo científico publicado en 2008
Metabolic network analysis of Bacillus clausii on minimal and semirich medium using (13)C-labeled glucose
artículo científico publicado en 2002
Metabolic network analysis of Penicillium chrysogenum using (13)C-labeled glucose
scientific article published on 01 June 2000
Metabolic network analysis of Streptomyces tenebrarius, a Streptomyces species with an active entner-doudoroff pathway
artículo científico publicado en 2005
Metabolic network analysis of an adipoyl-7-ADCA-producing strain of Penicillium chrysogenum: elucidation of adipate degradation
artículo científico publicado en 2002
Metabolic network analysis of penicillium chrysogenum using 13c‐labeled glucose
article
Metabolic network analysis on Phaffia rhodozyma yeast using 13C-labeled glucose and gas chromatography-mass spectrometry
artículo científico publicado en 2004
Metabolic network analysis. A powerful tool in metabolic engineering.
artículo científico publicado en 2000
Metabolic network driven analysis of genome-wide transcription data from Aspergillus nidulans
artículo científico publicado en 2006
Metabolic network remodelling enhances yeast’s fitness on xylose using aerobic glycolysis
artículo científico publicado en 2021
Metabolic network-based stratification of hepatocellular carcinoma reveals three distinct tumor subtypes
article published in the Proceedings of the National Academy of Sciences of the United States of America
Metabolic pathway engineering for fatty acid ethyl ester production in Saccharomyces cerevisiae using stable chromosomal integration
artículo científico publicado en 2014
Metabolism: Built on stable catalysts
artículo científico publicado en 2017
Metabolite Depletion Affects Flux Profiling of Cell Lines
artículo científico publicado en 2018
Metabolite profiling of fungi and yeast: from phenotype to metabolome by MS and informatics
artículo científico publicado en 2004
Metagenomic analysis of bile salt biotransformation in the human gut microbiome
scientific article published on 25 June 2019
Metagenomic analysis of bile salt biotransformation in the human gut microbiome
artículo científico publicado en 2019
Metagenomic analysis of bile salt biotransformation in the human gut microbiome
artículo científico publicado en 2019
Metagenomic analysis of bile salt biotransformation in the human gut microbiome
artículo científico publicado en 2019
Metagenomic analysis of microbe-mediated vitamin metabolism in the human gut microbiome
Metagenomic data utilization and analysis (MEDUSA) and construction of a global gut microbial gene catalogue
artículo científico publicado en 2014
Metastatic triple negative breast cancer adapts its metabolism to destination tissues while retaining key metabolic signatures
artículo científico publicado en 2022
Microbial acetyl-CoA metabolism and metabolic engineering
artículo científico
Microbial isoprenoid production: an example of green chemistry through metabolic engineering
artículo científico publicado en 2005
Microbiome and metabolome features of the cardiometabolic disease spectrum
artículo científico publicado en 2022
Microfluidic screening and whole-genome sequencing identifies mutations associated with improved protein secretion by yeast
artículo científico publicado en 2015
Minimum Information about a Biosynthetic Gene cluster.
artículo científico publicado en 2015
Model-Driven Elucidation of Lactose and Galactose Metabolism via Oxidoreductive Pathway in Sungouiella intermedia for Cell Factory Applications
artículo científico publicado en 2024
Modeling Lactococcus lactis using a genome-scale flux model
artículo científico publicado en 2005
Modeling fermentations with recombinant microorganisms: Formulation of a structured model
artículo científico publicado en 1991
Modeling isotopomer distributions in biochemical networks using isotopomer mapping matrices
artículo científico publicado en 1997
Modeling the growth and proteinase A production in continuous cultures of recombinant Saccharomyces cerevisiae
artículo científico publicado en 1997
Modelling approaches for studying the microbiome
scientific article published on 23 July 2019
Modelling of the protonophoric uncoupling by phenoxyacetic acid of the plasma membrane potential of Penicillium chrysogenum
article
Modelling of the protonophoric uncoupling by phenoxyacetic acid of the plasma membrane potential of Penicillium chrysogenum
scientific article published on 01 December 1998
Modelling the growth of filamentous fungi
artículo científico publicado en 1992
Moderate Expression of SEC16 Increases Protein Secretion by Saccharomyces cerevisiae
artículo científico publicado en 2017
Modifying Yeast Tolerance to Inhibitory Conditions of Ethanol Production Processes
artículo científico publicado en 2015
Modular Pathway Rewiring of Yeast for Amino Acid Production
scientific article published on 31 July 2018
Modular pathway rewiring of Saccharomyces cerevisiae enables high-level production of L-ornithine
artículo científico publicado en 2015
Modulation of saturation and chain length of fatty acids in Saccharomyces cerevisiae for production of cocoa butter-like lipids
artículo científico publicado en 2018
Molecular and process design for rotavirus-like particle production in Saccharomyces cerevisiae
artículo científico publicado en 2011
Molecular basis for mycophenolic acid biosynthesis in Penicillium brevicompactum
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artículo científico publicado en 2011
Molecular mechanism of flocculation self-recognition in yeast and its role in mating and survival
artículo científico publicado en 2015
Morphological characterization of Aspergillus nidulans: growth, septation and fragmentation
scientific article published on 01 January 2001
Morphology and physiology of an α-amylase producing strain of Aspergillus oryzae during batch cultivations
artículo científico publicado en 2000
Morphology and physiology of the dimorphic fungus Mucor circinelloides (syn. M. racemosus) during anaerobic growth.
artículo científico publicado en 2003
Morphology of Trichoderma reesei QM 9414 in submerged cultures
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Most influential FEMS publications
artículo científico publicado en 2014
Multi-omics analyses of the transition to the Crabtree effect in S. cerevisiae reveals a key role for the citric acid shuttle
artículo científico publicado en 2022
Multidimensional engineering of Saccharomyces cerevisiae for efficient synthesis of medium-chain fatty acids
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scholarly article
Multiplexed CRISPR/Cas9 Genome Editing and Gene Regulation Using Csy4 in Saccharomyces cerevisiae.
artículo científico publicado en 2017
Multiscale models quantifying yeast physiology: towards a whole-cell model
artículo científico publicado en 2022
NADPH-dependent glutamate dehydrogenase in Penicillium chrysogenum is involved in regulation of beta-lactam production
artículo científico publicado en 2008
Natural computation meta-heuristics for the in silico optimization of microbial strains
artículo científico publicado en 2008
Network analyses identify liver-specific targets for treating liver diseases
artículo científico publicado en 2017
Network identification and flux quantification in the central metabolism of Saccharomyces cerevisiae under different conditions of glucose repression
artículo científico publicado en 2001
Networking in metabolism and human disease
artículo científico publicado en 2015
New Challenges to Study Heterogeneity in Cancer Redox Metabolism
artículo científico publicado en 2017
New paradigms for metabolic modeling of human cells
artículo científico
Nitrogen limitation reveals large reserves in metabolic and translational capacities of yeast
scientific article published on 20 April 2020
Novel insights into obesity and diabetes through genome-scale metabolic modeling
artículo científico publicado en 2013
Nutritional systems biology: definitions and approaches
artículo científico publicado en 2009
On-line study of fungal morphology during submerged growth in a small flow-through cell
artículo científico publicado en 1998
On-line study of growth kinetics of single hyphae of Aspergillus oryzae in a flow-through cell
artículo científico publicado en 1999
One-year supplementation with Lactobacillus reuteri ATCC PTA 6475 counteracts a degradation of gut microbiota in older women with low bone mineral density
artículo científico publicado en 2022
On‐line study of fungal morphology during submerged growth in a small flow‐through cell
article
On‐line study of growth kinetics of single hyphae of Aspergillus oryzae in a flow‐through cell
Opportunities for yeast metabolic engineering: Lessons from synthetic biology
artículo científico publicado en 2011
OptFlux: an open-source software platform for in silico metabolic engineering
artículo científico publicado en 2010
Optimization of ethanol production in Saccharomyces cerevisiae by metabolic engineering of the ammonium assimilation
artículo científico publicado en 2000
Optimization of heterologous production of the polyketide 6-MSA in Saccharomyces cerevisiae
artículo científico publicado en 2007
Overexpression of isocitrate lyase-glyoxylate bypass influence on metabolism in Aspergillus niger
artículo científico publicado en 2009
Pan-cancer analysis of the metabolic reaction network
Pathway engineering in yeast for synthesizing the complex polyketide bikaverin
artículo científico publicado en 2020
Pathway kinetics and metabolic control analysis of a high-yielding strain of Penicillium chrysogenum during fed batch cultivations
artículo científico publicado en 1996
Pathway kinetics and metabolic control analysis of a high-yielding strain of Penicillium chrysogenum during fed batch cultivations
article
Pellet formation and fragmentation in submerged cultures of Penicillium chrysogenum and its relation to penicillin production
article
Penicillium arizonense, a new, genome sequenced fungal species, reveals a high chemical diversity in secreted metabolites
artículo científico publicado en 2016
Personal model-assisted identification of NAD+ and glutathione metabolism as intervention target in NAFLD.
artículo científico publicado en 2017
Pharmaceutical protein production by yeast: towards production of human blood proteins by microbial fermentation
artículo científico
Phenotypic characterization of glucose repression mutants of Saccharomyces cerevisiae using experiments with 13C-labelled glucose
artículo científico publicado en 2004
Phosphoglycerate mutase knock-out mutant Saccharomyces cerevisiae: physiological investigation and transcriptome analysis
artículo científico publicado en 2010
Physiological and transcriptional characterization of Saccharomyces cerevisiae engineered for production of fatty acid ethyl esters
artículo científico publicado en 2015
Physiological characterisation of Penicillium chrysogenum strains expressing the expandase gene from Streptomyces clavuligerus during batch cultivations. Growth and adipoyl-7-aminodeacetoxycephalosporanic acid production
artículo científico publicado en 2001
Physiological characterisation of acuB deletion in Aspergillus niger.
artículo científico publicado en 2009
Physiological characterisation of recombinant Aspergillus nidulans strains with different creA genotypes expressing A. oryzae alpha-amylase
artículo científico publicado en 2002
Physiological characterization of glucose repression in the strains with SNF1 and SNF4 genes deleted
artículo científico publicado en 2007
Physiological characterization of recombinant Saccharomyces cerevisiae expressing the Aspergillus nidulans phosphoketolase pathway: validation of activity through 13C-based metabolic flux analysis
artículo científico publicado en 2012
Physiological characterization of secondary metabolite producing Penicillium cell factories
artículo científico publicado en 2017
Physiological characterization of the high malic acid-producing Aspergillus oryzae strain 2103a-68.
artículo científico publicado en 2014
Physiological characterization of xylose metabolism in Aspergillus niger under oxygen-limited conditions
artículo científico publicado en 2007
Physiological effects of nitrogen starvation in an anaerobic batch culture of Saccharomyces cerevisiae
article
Physiological studies in aerobic batch cultivations of Saccharomyces cerevisiae strains harboring the MEL1 gene
artículo científico publicado en 2000
Physiology of Aspergillus niger in oxygen-limited continuous cultures: Influence of aeration, carbon source concentration and dilution rate
artículo científico publicado en 2009
Plasma and Urine Free Glycosaminoglycans as Monitoring and Predictive Biomarkers in Metastatic Renal Cell Carcinoma: A Prospective Cohort Study
artículo científico publicado en 2023
Plasma glycosaminoglycans and cell-free DNA to discriminate benign and malignant lung diseases
artículo científico publicado en 2024
Polyol synthesis in Aspergillus niger: influence of oxygen availability, carbon and nitrogen sources on the metabolism
artículo científico publicado en 2006
Population balance models of autonomous microbial oscillations
artículo científico publicado en 1995
Predicting growth of the healthy infant using a genome scale metabolic model
artículo científico publicado en 2017
Principles of optimal metabolic network operation
artículo científico publicado en 2007
Production of a heterologous proteinase A by Saccharomyces kluyveri
artículo científico publicado en 2001
Production of biopharmaceutical proteins by yeast: advances through metabolic engineering
artículo científico publicado en 2012
Production of extracellular protease and glucose uptake in Bacillus clausii in steady-state and transient continuous cultures
artículo científico publicado en 2002
Production of farnesene and santalene by Saccharomyces cerevisiae using fed-batch cultivations with RQ-controlled feed
artículo científico publicado en 2015
Production of fatty acid-derived oleochemicals and biofuels by synthetic yeast cell factories
artículo científico publicado en 2016
Production of natural products through metabolic engineering of Saccharomyces cerevisiae
artículo científico
Production of plant sesquiterpenes in Saccharomyces cerevisiae: effect of ERG9 repression on sesquiterpene biosynthesis
artículo científico publicado en 2008
Production of savinase and population viability of Bacillus clausii during high-cell-density fed-batch cultivations
artículo científico publicado en 2003
Production of teicoplanin by Actinoplanes teichomyceticus in continuous fermentation
artículo científico publicado en 2002
Production of the glycopeptide antibiotic A40926 by Nonomuraea sp. ATCC 39727: influence of medium composition in batch fermentation
artículo científico publicado en 2003
Production of the polyketide 6-MSA in yeast engineered for increased malonyl-CoA supply
artículo científico publicado en 2008
Production of β-ionone by combined expression of carotenogenic and plant CCD1 genes in Saccharomyces cerevisiae
artículo científico publicado en 2015
Production of β‐carotene in Saccharomyces cerevisiae through altering yeast lipid metabolism
artículo científico publicado en 2021
Production of β‐carotene in Saccharomyces cerevisiae through altering yeast lipid metabolism
artículo científico publicado en 2021
Professor John Villadsen, PhD, Dr. techn., Dr. h. c. mult (12.6.1936–22.7.2021)
artículo científico publicado en 2021
Professor Stefan Hohmann (08.09.1956–02.07.2021)
artículo científico publicado en 2022
Profiling of cytosolic and peroxisomal acetyl-CoA metabolism in Saccharomyces cerevisiae
artículo científico publicado en 2012
Prognostic Value of Plasma and Urine Glycosaminoglycan Scores in Clear Cell Renal Cell Carcinoma
artículo científico publicado en 2016
Prospects for microbial biodiesel production
scientific article published on 16 February 2011
Prospects for systems biology and modeling of the gut microbiome
scientific article published on 09 March 2011
Prospects of yeast systems biology for human health: integrating lipid, protein and energy metabolism
artículo científico publicado en 2010
Protein kinase A is involved in the control of morphology and branching during aerobic growth of Mucor circinelloides
artículo científico publicado en 2004
Proteome allocations change linearly with specific growth rate of Saccharomyces cerevisiae under glucose-limitation
artículo científico publicado en 2021
Proteome allocations change linearly with the specific growth rate of Saccharomyces cerevisiae under glucose limitation
artículo científico publicado en 2022
Proteome analysis of xylose metabolism in Rhodotorula toruloides during lipid production
Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments
artículo científico publicado en 2021
Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments
artículo científico publicado en 2020
Proteome reallocation from amino acid biosynthesis to ribosomes enables yeast to grow faster in rich media
artículo científico publicado en 2020
Proteome- and Transcriptome-Driven Reconstruction of the Human Myocyte Metabolic Network and Its Use for Identification of Markers for Diabetes
artículo científico publicado en 2016
Proteome- and transcriptome-driven reconstruction of the human myocyte metabolic network and its use for identification of markers for diabetes
artículo científico publicado en 2015
Proteomics. Tissue-based map of the human proteome
artículo científico publicado en 2015
Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing
artículo científico publicado en 2020
Purification and characterization of δ-(l-α-aminoadipyl)-l-cysteinyl-d-valine synthetase from Penicillium chrysogenum
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artículo científico publicado el 1 de octubre de 1997
Pyruvate decarboxylases from the petite-negative yeast Saccharomyces kluyveri
artículo científico publicado en 2003
Pyruvate kinase L/R is a regulator of lipid metabolism and mitochondrial function
scientific article published on 04 January 2019
Quantification of Intracellular Metabolic Fluxes from Fractional Enrichment and13C–13C Coupling Constraints on the Isotopomer Distribution in Labeled Biomass Components
scientific article published on 01 April 1999
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome.
artículo científico publicado en 2015
Quantifying absolute gene expression profiles reveals distinct regulation of central carbon metabolism genes in yeast
artículo científico publicado en 2021
Quantitative analysis of Penicillium chrysogenum Wis54-1255 transformants overexpressing the penicillin biosynthetic genes
artículo científico publicado en 2001
Quantitative analysis of amino acid metabolism in liver cancer links glutamate excretion to nucleotide synthesis
scientific article published on 27 April 2020
Quantitative analysis of glycerol accumulation, glycolysis and growth under hyper osmotic stress
artículo científico publicado en 2013
Quantitative analysis of metabolic fluxes in Escherichia coli, using two-dimensional NMR spectroscopy and complete isotopomer models
artículo científico publicado en 1999
RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor
scholarly article by Hao Wang published in October 2018
RAVEN 2.0: a versatile toolbox for metabolic network reconstruction and a case study onStreptomyces coelicolor
RNA-seq analysis of Pichia anomala reveals important mechanisms required for survival at low pH
artículo científico publicado en 2015
Rapid quantification of yeast lipid using microwave-assisted total lipid extraction and HPLC-CAD.
artículo científico publicado en 2013
Rational gRNA design based on transcription factor binding data
artículo científico publicado en 2021
Recent trends in metabolic engineering of microbial chemical factories
scientific article published on 09 June 2019
Reciprocal 13C-labeling: a method for investigating the catabolism of cosubstrates
artículo científico publicado en 2002
Recombinant bacterial hemoglobin alters metabolism of Aspergillus niger
artículo científico publicado en 2008
Recon3D enables a three-dimensional view of gene variation in human metabolism.
artículo científico publicado en 2018
Reconfiguration of the reductive TCA cycle enables high-level succinic acid production by Yarrowia lipolytica
artículo científico publicado en 2023
Reconstruction and Analysis of a Kluyveromyces marxianus Genome-scale Metabolic Model
Reconstruction and analysis of a Kluyveromyces marxianus genome-scale metabolic model
scientific article published on 06 November 2019
Reconstruction and evaluation of the synthetic bacterial MEP pathway in Saccharomyces cerevisiae
artículo científico publicado en 2012
Reconstruction and logical modeling of glucose repression signaling pathways in Saccharomyces cerevisiae
artículo científico publicado en 2009
Reconstruction of 24 Penicillium genome-scale metabolic models shows diversity based on their secondary metabolism
artículo científico publicado en 2018
Reconstruction of a Global Transcriptional Regulatory Network for Control of Lipid Metabolism in Yeast by Using Chromatin Immunoprecipitation with Lambda Exonuclease Digestion
artículo científico publicado en 2018
Reconstruction of a bacterial isoprenoid biosynthetic pathway in Saccharomyces cerevisiae
artículo científico publicado en 2008
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0
artículo científico publicado en 2022
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0
artículo científico publicado en 2021
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0
artículo científico publicado en 2021
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0
artículo científico publicado en 2021
Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INIT
artículo científico publicado en 2012
Reconstruction of the central carbon metabolism of Aspergillus niger
artículo científico publicado en 2003
Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator
artículo científico publicado en 2009
Reconstruction of the yeast protein-protein interaction network involved in nutrient sensing and global metabolic regulation
artículo científico publicado en 2010
Recovery of phenotypes obtained by adaptive evolution through inverse metabolic engineering
artículo científico publicado en 2012
Redirection of lipid flux toward phospholipids in yeast increases fatty acid turnover and secretion
artículo científico publicado en 2018
Regulation of Yeast-to-Hyphae Transition in Yarrowia lipolytica
scientific article published in 2018
Regulation of amino-acid metabolism controls flux to lipid accumulation in Yarrowia lipolytica
artículo científico publicado en 2016
Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae.
artículo científico publicado en 2002
Reprogramming Yeast Metabolism from Alcoholic Fermentation to Lipogenesis
scientific article published on 09 August 2018
Respiratory metabolism and calorie restriction relieve persistent endoplasmic reticulum stress induced by calcium shortage in yeast
artículo científico publicado en 2016
Revealing the beneficial effect of protease supplementation to high gravity beer fermentations using "-omics" techniques
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artículo científico publicado en 2011
Rewiring carbon flux in Escherichia coli using a bifunctional molecular switch
artículo científico publicado en 2020
Rewiring carbon metabolism in yeast for high level production of aromatic chemicals
scientific article published on 31 October 2019
Rewiring regulation on respiro-fermentative metabolism relieved Crabtree effects in Saccharomyces cerevisiae
artículo científico publicado en 2022
Rheological characterization of media containing Penicillium chrysogenum
artículo científico publicado en 1993
Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm
artículo científico publicado en 2005
Role of substrate concentration in mitosis and hyphal extension of Aspergillus
artículo científico publicado en 2000
Roux-en-Y Gastric Bypass and Vertical Banded Gastroplasty Induce Long-Term Changes on the Human Gut Microbiome Contributing to Fat Mass Regulation.
artículo científico publicado en 2015
SLIMEr: probing flexibility of lipid metabolism in yeast with an improved constraint-based modeling framework
SLIMEr: probing flexibility of lipid metabolism in yeast with an improved constraint-based modeling framework
Saccharomyces cerevisiae displays a stable transcription start site landscape in multiple conditions
Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network
artículo científico publicado en 2003
Sampling the solution space in genome-scale metabolic networks reveals transcriptional regulation in key enzymes
artículo científico publicado en 2010
Scheffersomyces stipitis: a comparative systems biology study with the Crabtree positive yeast Saccharomyces cerevisiae
artículo científico publicado en 2012
Screening of 2a peptides for Polycistronic Gene Expression in Yeast
artículo científico publicado en 2018
Selection of complementary foods based on optimal nutritional values
artículo científico publicado en 2017
Semi-on-line analysis for fast and precise monitoring of bioreaction processes
artículo científico publicado en 1996
Silencing MIG1 in Saccharomyces cerevisiae: effects of antisense MIG1 expression and MIG1 gene disruption.
artículo científico publicado en 1997
Simple and robust method for estimation of the split between the oxidative pentose phosphate pathway and the Embden-Meyerhof-Parnas pathway in microorganisms
artículo científico publicado en 2001
Simplified Intestinal Microbiota to Study Microbe-Diet-Host Interactions in a Mouse Model
article by Petia Kovatcheva-Datchary et al published 26 March 2019 in Cell Reports
Simulation of penicillin production in fed-batch cultivations using a morphologically structured model
artículo científico publicado en 1997
Simultaneous analysis of amino and nonamino organic acids as methyl chloroformate derivatives using gas chromatography-mass spectrometry
artículo científico publicado en 2003
Simultaneous overexpression of enzymes of the lower part of glycolysis can enhance the fermentative capacity of Saccharomyces cerevisiae
artículo científico publicado en 2000
Six Tissue Transcriptomics Reveals Specific Immune Suppression in Spleen by Dietary Polyunsaturated Fatty Acids
artículo científico publicado en 2016
Specific growth rate and substrate dependent polyhydroxybutyrate production in Saccharomyces cerevisiae
artículo científico publicado en 2013
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
scientific article published on 06 May 2020
Steady-state and transient-state analyses of aerobic fermentation in Saccharomyces kluyveri.
artículo científico publicado en 2002
Strategies and challenges for metabolic rewiring
Stratification of Hepatocellular Carcinoma Patients Based on Acetate Utilization
artículo científico publicado en 2015
Stress-Induced Expression is Enriched for Evolutionarily Young Genes in Diverse Budding Yeasts
artículo científico publicado en 2019
Stress-induced expression is enriched for evolutionarily young genes in diverse budding yeasts
artículo científico publicado en 2020
Structural and transcriptional analysis of the pyrABCN, pyrD and pyrF genes in Aspergillus nidulans and the evolutionary origin of fungal dihydroorotases
artículo científico publicado en 1999
Structured modeling of a microbial system: I. A theoretical study of lactic acid fermentation
artículo científico publicado en 1991
Structured modeling of a microbial system: II. Experimental verification of a structured lactic acid fermentation model
artículo científico publicado en 1991
Structured modeling of a microbial system: III. Growth on mixed substrates
artículo científico publicado en 1991
Studies of the production of fungal polyketides in Aspergillus nidulans by using systems biology tools
artículo científico publicado en 2009
Study of the glucoamylase promoter in Aspergillus niger using green fluorescent protein
scientific article published on 01 March 1999
Succinate dehydrogenase inhibition leads to epithelial-mesenchymal transition and reprogrammed carbon metabolism
artículo científico publicado en 2014
Supervised generative design of regulatory DNA for gene expression control
Surface Hydrophobicity of Aspergillus nidulans Conidiospores and Its Role in Pellet Formation
article by J. Dynesen et al published 6 June 2003 in Biotechnology Progress
Symptomatic atherosclerosis is associated with an altered gut metagenome
artículo científico publicado en 2012
Synergies between synthetic biology and metabolic engineering
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artículo científico publicado el 5 de agosto de 2011
Synthetic Biology of Yeast
artículo científico publicado en 2019
Synthetic biology for engineering acetyl coenzyme A metabolism in yeast
artículo científico publicado en 2014
Systematic Analysis Reveals that Cancer Mutations Converge on Deregulated Metabolism of Arachidonate and Xenobiotics
artículo científico publicado en 2016
Systematic analysis of overall survival and interactions between tumor mutations and drug treatment
artículo científico publicado en 2016
Systematic inference of functional phosphorylation events in yeast metabolism
artículo científico publicado en 2017
Systemic analysis of the response of Aspergillus niger to ambient pH.
artículo científico publicado en 2009
Systems Biology of Metabolism
artículo científico publicado en 2017
Systems analysis unfolds the relationship between the phosphoketolase pathway and growth in Aspergillus nidulans
artículo científico publicado en 2008
Systems biology analysis of hepatitis C virus infection reveals the role of copy number increases in regions of chromosome 1q in hepatocellular carcinoma metabolism
artículo científico publicado en 2016
Systems biology in hepatology: approaches and applications
artículo científico publicado en 2018
Systems biology of antibiotic production by microorganisms
artículo científico publicado en 2007
Systems biology of energy homeostasis in yeast
scientific article published on May 2010
Systems biology of industrial microorganisms
artículo científico publicado en 2010
Systems biology of lipid metabolism: from yeast to human
scientific article published on December 2009
Systems biology of yeast: enabling technology for development of cell factories for production of advanced biofuels
artículo científico
Systems medicine and metabolic modelling
artículo científico publicado en 2012
TCSBN: a database of tissue and cancer specific biological networks
artículo científico publicado en 2017
TRYing to evaluate production costs in microbial biotechnology
artículo científico publicado en 2024
Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors.
artículo científico publicado en 2018
Teaching microbial physiology using glucose repression phenomenon in baker's yeast as an example
artículo científico publicado en 2005
The BioInnovation Institute as a catalyst for European life science startup creation
artículo científico publicado en 2022
The Impact of Systems Biology on Bioprocessing
artículo científico publicado en 2017
The Influence of Microgravity on Invasive Growth in Saccharomyces cerevisiae
artículo científico publicado en 2011
The RAVEN toolbox and its use for generating a genome-scale metabolic model for Penicillium chrysogenum
artículo científico publicado en 2013
The acute effect of metabolic cofactor supplementation: a potential therapeutic strategy against non-alc33oholic fatty liver disease
scientific article published on 01 April 2020
The beta-subunits of the Snf1 kinase in Saccharomyces cerevisiae, Gal83 and Sip2, but not Sip1, are redundant in glucose derepression and regulation of sterol biosynthesis
artículo científico publicado en 2010
The effect of CreA in glucose and xylose catabolism in Aspergillus nidulans
artículo científico publicado en 2003
The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism
artículo científico publicado en 2008
The gut microbiota modulates host amino acid and glutathione metabolism in mice
artículo científico publicado en 2015
The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling
artículo científico publicado en 2015
The human liver-specific proteome defined by transcriptomics and antibody-based profiling
artículo científico publicado en 2014
The human secretome
artículo científico publicado en 2019
The impact of GAL6, GAL80, and MIG1 on glucose control of the GAL system in Saccharomyces cerevisiae
artículo científico publicado en 2001
The impact of respiration and oxidative stress response on recombinant α-amylase production by Saccharomyces cerevisiae.
artículo científico publicado en 2016
The influence of carbon sources and morphology on nystatin production by Streptomyces noursei
artículo científico publicado en 2002
The influence of nitrogen sources on the α-amylase productivity of Aspergillus oryzae in continuous cultures
article
The integration of bio-catalysis and electrocatalysis to produce fuels and chemicals from carbon dioxide
artículo científico publicado en 2022
The metabolic response of heterotrophic Arabidopsis cells to oxidative stress
scientific article published in 2007
The next wave in metabolome analysis
artículo científico publicado en 2005
The role of metabolic engineering in the improvement of Saccharomyces cerevisiae: utilization of industrial media
artículo científico publicado en 2000
The role of metabolic engineering in the production of secondary metabolites
artículo científico publicado en 1998
The roles of galactitol, galactose-1-phosphate, and phosphoglucomutase in galactose-induced toxicity in Saccharomyces cerevisiae
artículo científico publicado en 2008
The simultaneous biosynthesis and uptake of amino acids by Lactococcus lactis studied by (13)C-labeling experiments
artículo científico publicado en 2002
The transcription factor Leu3 shows differential binding behavior in response to changing leucine availability
scientific article published on 26 June 2020
The yeast osmostress response is carbon source dependent
artículo científico publicado en 2017
Thermotolerant Yeast Strains Adapted by Laboratory Evolution Show Trade-Off at Ancestral Temperatures and Preadaptation to Other Stresses
artículo científico publicado en 2015
Thermotolerant yeasts selected by adaptive evolution express heat stress response at 30 °C.
artículo científico publicado en 2016
Third-generation biorefineries as the means to produce fuels and chemicals from CO2
artículo científico publicado en 2020
Time course gene expression profiling of yeast spore germination reveals a network of transcription factors orchestrating the global response
artículo científico publicado en 2012
Toward design-based engineering of industrial microbes
scientific article published on 11 March 2010
Toward systems metabolic engineering of Aspergillus and Pichia species for the production of chemicals and biofuels
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artículo científico publicado el 11 de abril de 2013
Transcription analysis using high-density micro-arrays of Aspergillus nidulans wild-type and creA mutant during growth on glucose or ethanol
artículo científico publicado en 2006
Transcription factor control of growth rate dependent genes in Saccharomyces cerevisiae: a three factor design
artículo científico publicado en 2008
Transcriptional control of metabolic fluxes
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artículo científico publicado el 29 de marzo de 2011
Transcriptional profiling of extracellular amino acid sensing in Saccharomyces cerevisiae and the role of Stp1p and Stp2p
artículo científico publicado en 2004
Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategies
artículo científico publicado en 2017
Transcriptional, proteomic, and metabolic responses to lithium in galactose-grown yeast cells
artículo científico publicado en 2003
Transcriptome signatures in Helicobacter pylori-infected mucosa identifies acidic mammalian chitinase loss as a corpus atrophy marker
artículo científico publicado en 2013
Transcriptomic response of Saccharomyces cerevisiae to octanoic acid production
artículo científico publicado en 2021
Transcriptomics resources of human tissues and organs
artículo científico publicado en 2016
Transient marker system for iterative gene targeting of a prototrophic fungus
artículo científico publicado en 2007
Translational and systems medicine
artículo científico publicado en 2012
Transport of sugars via two anomer-specific sites on mannose-phosphotransferase system in Lactococcus cremoris: in vivo study of mechanism, kinetics, and adaptation
artículo científico publicado en 1993
Trehalose-6-phosphate synthase and stabilization of yeast glycolysis
artículo científico publicado en 2015
Two Uptake Systems for Fructose in Lactococcus lactis subsp. cremoris FD1 Produce Glycolytic and Gluconeogenic Fructose Phosphates and Induce Oscillations in Growth and Lactic Acid Formation
artículo científico publicado en 1993
Type 2 diabetes and obesity induce similar transcriptional reprogramming in human myocytes
artículo científico publicado en 2017
Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis
artículo científico publicado en 2009
Uncovering transcriptional regulation of metabolism by using metabolic network topology
artículo científico publicado en 2005
Understanding signaling in yeast: Insights from network analysis.
artículo científico
Understanding the interactions between bacteria in the human gut through metabolic modeling
artículo científico publicado en 2013
Unraveling molecular signatures of immunostimulatory adjuvants in the female genital tract through systems biology
artículo científico publicado en 2011
Unravelling evolutionary strategies of yeast for improving galactose utilization through integrated systems level analysis
artículo científico publicado en 2011
Use of genome-scale metabolic models for understanding microbial physiology
artículo científico publicado en 2010
Use of genome-scale microbial models for metabolic engineering
artículo científico publicado en 2004
Use of laminar flow patterning for miniaturised biochemical assays.
artículo científico publicado en 2004
Using transcriptomics to improve butanol tolerance of Synechocystis sp. strain PCC 6803.
artículo científico publicado en 2013
Versatile enzyme expression and characterization system for Aspergillus nidulans, with the Penicillium brevicompactum polyketide synthase gene from the mycophenolic acid gene cluster as a test case
artículo científico publicado en 2011
Voluntary Running Suppresses Tumor Growth through Epinephrine- and IL-6-Dependent NK Cell Mobilization and Redistribution
artículo científico publicado en 2016
Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications
artículo científico publicado en 2010
Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies
artículo científico publicado en 2022
Yeast Systems Biology
scientific article published in 2008
Yeast adapts to diverse ecological niches driven by genomics and metabolic reprogramming
artículo científico publicado en 2024
Yeast biological networks unfold the interplay of antioxidants, genome and phenotype, and reveal a novel regulator of the oxidative stress response
artículo científico publicado en 2010
Yeast has evolved to minimize protein resource cost for synthesizing amino acids
artículo científico publicado en 2022
Yeast increases glycolytic flux to support higher growth rates accompanied by decreased metabolite regulation and lower protein phosphorylation
artículo científico publicado en 2023
Yeast mitochondria: an overview of mitochondrial biology and the potential of mitochondrial systems biology
artículo científico publicado en 2018
Yeast optimizes metal utilization based on metabolic network and enzyme kinetics
artículo científico publicado en 2021
Yeast systems biology
artículo científico publicado en 2008
Yeast systems biology to unravel the network of life
artículo científico publicado en 2006
α-Amylase production in high cell density submerged cultivation of Aspergillus oryzae and A. nidulans
artículo científico publicado en 2001
α-Amylase production in recombinant Aspergillus oryzae during fed-batch and continuous cultivations