Lista de obras - Yuhai Tu - Dominio Público Uruguay

A dual regulation mechanism of histidine kinase CheA identified by combining network-dynamics modeling and system-level input-output data

artículo científico publicado en 2018

A mechanism for precision-sensing via a gradient-sensing pathway: a model of Escherichia coli thermotaxis

artículo científico publicado en 2009

A modular gradient-sensing network for chemotaxis in Escherichia coli revealed by responses to time-varying stimuli

artículo científico publicado en 2010

Active and passive particles: Modeling beads in a bacterial bath

article

Adapt locally and act globally: strategy to maintain high chemoreceptor sensitivity in complex environments ⬇️

artículo científico publicado el 15 de marzo de 2011

Adaptation of Living Systems

scientific article published on 08 December 2017

An allosteric model for heterogeneous receptor complexes: understanding bacterial chemotaxis responses to multiple stimuli

artículo científico publicado en 2005

Angle sensing in magnetotaxis of Magnetospirillum magneticum AMB-1

artículo científico publicado en 2014

Bacterial flagella grow through an injection-diffusion mechanism

artículo científico publicado en 2017

Barrier Crossing in Escherichia coli Chemotaxis

artículo científico publicado en 2017

Behaviors and strategies of bacterial navigation in chemical and nonchemical gradients

artículo científico publicado en 2014

Both piston-like and rotational motions are present in bacterial chemoreceptor signaling

artículo científico publicado en 2015

Chaotic domains: A numerical investigation

artículo científico publicado en 1994

Coarsening, mixing, and motion: the complex evolution of epitaxial islands

artículo científico publicado en 2007

Coordinated switching of bacterial flagellar motors: evidence for direct motor-motor coupling?

artículo científico publicado en 2013

Design principles and optimal performance for molecular motors under realistic constraints

artículo científico publicado en 2018

Design principles for enhancing phase sensitivity and suppressing phase fluctuations simultaneously in biochemical oscillatory systems.

artículo científico publicado en 2018

Discovery of novel chemoeffectors and rational design of Escherichia coli chemoreceptor specificity

artículo científico publicado en 2013

Dynamics of the Bacterial Flagellar Motor: The Effects of Stator Compliance, Back Steps, Temperature, and Rotational Asymmetry ⬇️

artículo científico publicado el 20 de abril de 2011

Dynamics of the bacterial flagellar motor with multiple stators

scholarly article

Effects of adaptation in maintaining high sensitivity over a wide range of backgrounds for Escherichia coli chemotaxis

artículo científico publicado en 2007

Effects of receptor interaction in bacterial chemotaxis.

artículo científico publicado en 2004

Error-Speed Correlations in Biopolymer Synthesis

scientific article published on 01 July 2019

Escape band in Escherichia coli chemotaxis in opposing attractant and nutrient gradients

scientific article published on 23 January 2019

Excitation-contraction coupling gain and cooperativity of the cardiac ryanodine receptor: a modeling approach

artículo científico publicado en 2005

Filtering input fluctuations in intensity and in time underlies stochastic transcriptional pulses without feedback

artículo científico publicado en 2020

Finding gene network topologies for given biological function with recurrent neural network

artículo científico publicado en 2021

Free Energy Cost of Reducing Noise while Maintaining a High Sensitivity ⬇️

artículo científico publicado en 2015

Frequency-dependent Escherichia coli chemotaxis behavior.

artículo científico publicado en 2012

How white noise generates power-law switching in bacterial flagellar motors

artículo científico publicado en 2005

Hydrodynamics and phases of flocks

article

Information processing in bacteria: memory, computation, and statistical physics: a key issues review

artículo científico publicado en 2016

Lateral density of receptor arrays in the membrane plane influences sensitivity of the E. coli chemotaxis response

artículo científico publicado en 2011

Logarithmic sensing in Escherichia coli bacterial chemotaxis

artículo científico publicado en 2009

Long-Range Order in a Two-Dimensional DynamicalXYModel: How Birds Fly Together

artículo científico publicado en 1995

Macroscopic traveling packet and soliton states of quasi-one-dimensional flocks

scientific article published on 16 May 2014

Microscopic dynamics of silicon oxidation

artículo científico publicado en 2002

Modeling the chemotactic response of Escherichia coli to time-varying stimuli

artículo científico publicado en 2008

Moving and staying together without a leader

artículo científico publicado en 2003

Noise filtering strategies in adaptive biochemical signaling networks: Application to E. coli chemotaxis

artículo científico publicado en 2011

Origin of apparent critical thickness for island formation in heteroepitaxy

scientific article published on 16 November 2004

Pathway-based mean-field model for Escherichia coli chemotaxis.

artículo científico publicado en 2012

Perfect and Near-Perfect Adaptation in a Model of Bacterial Chemotaxis ⬇️

artículo científico publicado el 1 de mayo de 2003

Precision Sensing by Two Opposing Gradient Sensors: How Does Escherichia coli Find its Preferred pH Level? ⬇️

artículo científico publicado el 2 de julio de 2013

Quantitative Modeling of Bacterial Chemotaxis: Signal Amplification and Accurate Adaptation ⬇️

artículo científico publicado el 28 de febrero de 2013

Quantitative modeling of Escherichia coli chemotactic motion in environments varying in space and time

artículo científico publicado en 2010

Quantitative modeling of sensitivity in bacterial chemotaxis: the role of coupling among different chemoreceptor species

artículo científico publicado en 2003

Sequential modification of bacterial chemoreceptors is key for achieving both accurate adaptation and high gain

artículo científico publicado en 2020

Swarming in the Dirt: Ordered Flocks with Quenched Disorder

artículo científico publicado en 2018

Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons

artículo científico publicado en 2002

Tandem adaptation with a common design in Escherichia coli chemotaxis ⬇️

artículo científico publicado el 24 de agosto de 2012

The cost of sensitive response and accurate adaptation in networks with an incoherent type-1 feed-forward loop

artículo científico publicado en 2013

The energy cost and optimal design for synchronization of coupled molecular oscillators

scientific article published on 11 November 2019

The energy–speed–accuracy trade-off in sensory adaptation ⬇️

artículo científico publicado el 25 de marzo de 2012

The free energy cost of accurate biochemical oscillations ⬇️

artículo científico publicado en 2015

The nonequilibrium mechanism for ultrasensitivity in a biological switch: sensing by Maxwell's demons

artículo científico publicado en 2008

Lista de obras de Yuhai Tu

A dual regulation mechanism of histidine kinase CheA identified by combining network-dynamics modeling and system-level input-output data

A mechanism for precision-sensing via a gradient-sensing pathway: a model of Escherichia coli thermotaxis

A modular gradient-sensing network for chemotaxis in Escherichia coli revealed by responses to time-varying stimuli

Active and passive particles: Modeling beads in a bacterial bath

Adapt locally and act globally: strategy to maintain high chemoreceptor sensitivity in complex environments ⬇️

Adaptation of Living Systems

An allosteric model for heterogeneous receptor complexes: understanding bacterial chemotaxis responses to multiple stimuli

Angle sensing in magnetotaxis of Magnetospirillum magneticum AMB-1

Bacterial flagella grow through an injection-diffusion mechanism

Barrier Crossing in Escherichia coli Chemotaxis

Behaviors and strategies of bacterial navigation in chemical and nonchemical gradients

Both piston-like and rotational motions are present in bacterial chemoreceptor signaling

Chaotic domains: A numerical investigation

Coarsening, mixing, and motion: the complex evolution of epitaxial islands

Coordinated switching of bacterial flagellar motors: evidence for direct motor-motor coupling?

Design principles and optimal performance for molecular motors under realistic constraints

Design principles for enhancing phase sensitivity and suppressing phase fluctuations simultaneously in biochemical oscillatory systems.

Discovery of novel chemoeffectors and rational design of Escherichia coli chemoreceptor specificity

Dynamics of the Bacterial Flagellar Motor: The Effects of Stator Compliance, Back Steps, Temperature, and Rotational Asymmetry ⬇️

Dynamics of the bacterial flagellar motor with multiple stators

Effects of adaptation in maintaining high sensitivity over a wide range of backgrounds for Escherichia coli chemotaxis

Effects of receptor interaction in bacterial chemotaxis.

Error-Speed Correlations in Biopolymer Synthesis

Escape band in Escherichia coli chemotaxis in opposing attractant and nutrient gradients

Excitation-contraction coupling gain and cooperativity of the cardiac ryanodine receptor: a modeling approach

Filtering input fluctuations in intensity and in time underlies stochastic transcriptional pulses without feedback

Finding gene network topologies for given biological function with recurrent neural network

Free Energy Cost of Reducing Noise while Maintaining a High Sensitivity ⬇️

Frequency-dependent Escherichia coli chemotaxis behavior.

How white noise generates power-law switching in bacterial flagellar motors

Hydrodynamics and phases of flocks

Information processing in bacteria: memory, computation, and statistical physics: a key issues review

Lateral density of receptor arrays in the membrane plane influences sensitivity of the E. coli chemotaxis response

Logarithmic sensing in Escherichia coli bacterial chemotaxis

Long-Range Order in a Two-Dimensional DynamicalXYModel: How Birds Fly Together

Macroscopic traveling packet and soliton states of quasi-one-dimensional flocks

Microscopic dynamics of silicon oxidation

Modeling the chemotactic response of Escherichia coli to time-varying stimuli

Moving and staying together without a leader

Noise filtering strategies in adaptive biochemical signaling networks: Application to E. coli chemotaxis

Origin of apparent critical thickness for island formation in heteroepitaxy

Pathway-based mean-field model for Escherichia coli chemotaxis.

Perfect and Near-Perfect Adaptation in a Model of Bacterial Chemotaxis ⬇️

Precision Sensing by Two Opposing Gradient Sensors: How Does Escherichia coli Find its Preferred pH Level? ⬇️

Quantitative Modeling of Bacterial Chemotaxis: Signal Amplification and Accurate Adaptation ⬇️

Quantitative modeling of Escherichia coli chemotactic motion in environments varying in space and time

Quantitative modeling of sensitivity in bacterial chemotaxis: the role of coupling among different chemoreceptor species

Sequential modification of bacterial chemoreceptors is key for achieving both accurate adaptation and high gain

Swarming in the Dirt: Ordered Flocks with Quenched Disorder

Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons

Tandem adaptation with a common design in Escherichia coli chemotaxis ⬇️

The cost of sensitive response and accurate adaptation in networks with an incoherent type-1 feed-forward loop

The energy cost and optimal design for synchronization of coupled molecular oscillators

The energy–speed–accuracy trade-off in sensory adaptation ⬇️

The free energy cost of accurate biochemical oscillations ⬇️

The nonequilibrium mechanism for ultrasensitivity in a biological switch: sensing by Maxwell's demons