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A Novel Sparse Compositional Technique Reveals Microbial Perturbations

article

A communal catalogue reveals Earth's multiscale microbial diversity

artículo científico publicado en 2017

A large scale prediction of bacteriocin gene blocks suggests a wide functional spectrum for bacteriocins

artículo científico publicado en 2015

American Gut: an Open Platform for Citizen Science Microbiome Research

article

An Elegan(t) Screen for Drug-Microbe Interactions

artículo científico publicado en 2017

Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data

scientific article published on 09 November 2020

Balance Trees Reveal Microbial Niche Differentiation.

scientific article published on 17 January 2017

Best practices for analysing microbiomes

artículo científico publicado en 2018

Bringing the Dynamic Microbiome to Life with Animations

artículo científico publicado en 2017

Calour: an Interactive, Microbe-Centric Analysis Tool

Context-aware dimensionality reduction deconvolutes gut microbial community dynamics

scientific article published on 31 August 2020

Correcting for Microbial Blooms in Fecal Samples during Room-Temperature Shipping

scientific article published on 07 March 2017

Correction for Morton et al., "Uncovering the Horseshoe Effect in Microbial Analyses".

artículo científico publicado en 2018

Creating a 3D microbial and chemical snapshot of a human habitat

artículo científico publicado en 2018

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

artículo científico publicado en 2017

Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules

artículo científico publicado en 2020

Discrete False-Discovery Rate Improves Identification of Differentially Abundant Microbes

artículo científico publicado en 2017

EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets

scientific article published on 15 March 2021

Environmental radiation alters the gut microbiome of the bank vole Myodes glareolus

scientific article published on 09 July 2018

Establishing microbial composition measurement standards with reference frames.

artículo científico publicado en 2019

Evaluating the impact of domestication and captivity on the horse gut microbiome.

artículo científico publicado en 2017

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

artículo científico publicado en 2018

High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

artículo científico publicado en 2020

Immunization with a heat-killed preparation of the environmental bacterium Mycobacterium vaccae promotes stress resilience in mice

artículo científico publicado en 2016

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome

artículo científico publicado en 2017

Impacts of the Human Gut Microbiome on Therapeutics.

artículo científico publicado en 2017

Learning representations of microbe-metabolite interactions

artículo científico publicado en 2019

Mass Spectrometry-Based Chemical Cartography of a Cardiac Parasitic Infection.

artículo científico publicado en 2017

MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

scientific article published on 16 October 2019

Metabolome-Informed Microbiome Analysis Refines Metadata Classifications and Reveals Unexpected Medication Transfer in Captive Cheetahs

scientific article published on 10 March 2020

Methods for phylogenetic analysis of microbiome data

scientific article published on 24 May 2018

Microbe-Metabolite Associations Linked to the Rebounding Murine Gut Microbiome Postcolonization with Vancomycin-Resistant Enterococcus faecium

artículo científico publicado en 2020

Microbiome-wide association studies link dynamic microbial consortia to disease

artículo científico publicado en 2016

Niche partitioning of a pathogenic microbiome driven by chemical gradients

artículo científico publicado en 2018

Parkinson's disease and Parkinson's disease medications have distinct signatures of the gut microbiome

artículo científico publicado en 2017

Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea

artículo científico publicado en 2019

Red Sea SAR11 and Prochlorococcus Single-Cell Genomes Reflect Globally Distributed Pangenomes

scientific article published on 17 June 2019

The Microbiome in Posttraumatic Stress Disorder and Trauma-Exposed Controls: An Exploratory Study

artículo científico

Uncovering the Horseshoe Effect in Microbial Analyses

artículo científico publicado en 2017

Visualizing 'omic feature rankings and log-ratios using Qurro

scientific article published on 28 April 2020

Lista de obras de

A Novel Sparse Compositional Technique Reveals Microbial Perturbations

A communal catalogue reveals Earth's multiscale microbial diversity

A large scale prediction of bacteriocin gene blocks suggests a wide functional spectrum for bacteriocins

American Gut: an Open Platform for Citizen Science Microbiome Research

An Elegan(t) Screen for Drug-Microbe Interactions

Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data

Balance Trees Reveal Microbial Niche Differentiation.

Best practices for analysing microbiomes

Bringing the Dynamic Microbiome to Life with Animations

Calour: an Interactive, Microbe-Centric Analysis Tool

Context-aware dimensionality reduction deconvolutes gut microbial community dynamics

Correcting for Microbial Blooms in Fecal Samples during Room-Temperature Shipping

Correction for Morton et al., "Uncovering the Horseshoe Effect in Microbial Analyses".

Creating a 3D microbial and chemical snapshot of a human habitat

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules

Discrete False-Discovery Rate Improves Identification of Differentially Abundant Microbes

EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets

Environmental radiation alters the gut microbiome of the bank vole Myodes glareolus

Establishing microbial composition measurement standards with reference frames.

Evaluating the impact of domestication and captivity on the horse gut microbiome.

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

Immunization with a heat-killed preparation of the environmental bacterium Mycobacterium vaccae promotes stress resilience in mice

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome

Impacts of the Human Gut Microbiome on Therapeutics.

Learning representations of microbe-metabolite interactions

Mass Spectrometry-Based Chemical Cartography of a Cardiac Parasitic Infection.

MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

Metabolome-Informed Microbiome Analysis Refines Metadata Classifications and Reveals Unexpected Medication Transfer in Captive Cheetahs

Methods for phylogenetic analysis of microbiome data

Microbe-Metabolite Associations Linked to the Rebounding Murine Gut Microbiome Postcolonization with Vancomycin-Resistant Enterococcus faecium

Microbiome-wide association studies link dynamic microbial consortia to disease

Niche partitioning of a pathogenic microbiome driven by chemical gradients

Parkinson's disease and Parkinson's disease medications have distinct signatures of the gut microbiome

Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea

Red Sea SAR11 and Prochlorococcus Single-Cell Genomes Reflect Globally Distributed Pangenomes

The Microbiome in Posttraumatic Stress Disorder and Trauma-Exposed Controls: An Exploratory Study

Uncovering the Horseshoe Effect in Microbial Analyses

Visualizing 'omic feature rankings and log-ratios using Qurro