Lista de obras -

"Candidatus Haloectosymbiotes riaformosensis" (Halobacteriaceae), an archaeal ectosymbiont of the hypersaline ciliate Platynematum salinarum

artículo científico publicado en 2014

Above‐ and below‐ground biodiversity responses to the prolonged flood pulse in central‐western Amazonia, Brazil

artículo científico publicado en 2021

Advancing biodiversity assessments with environmental DNA: Long-read technologies help reveal the drivers of Amazonian fungal diversity

artículo científico publicado en 2020

Assessing Biotic and Abiotic Interactions of Microorganisms in Amazonia through Co-Occurrence Networks and DNA Metabarcoding

artículo científico publicado en 2021

Benthic protists: the under-charted majority

artículo científico publicado en 2016

Beyond the "Code": A Guide to the Description and Documentation of Biodiversity in Ciliated Protists (Alveolata, Ciliophora).

artículo científico publicado en 2017

CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms

artículo científico publicado en 2012

Ciliate SSU-rDNA reference alignments and trees for phylogenetic placements of metabarcoding data

artículo científico publicado en 2021

Ciliates and the rare biosphere: a review

artículo científico publicado en 2014

Ciliates — Protists with complex morphologies and ambiguous early fossil record

scholarly article by Micah Dunthorn published in September 2015

Clarifying the Relationships between Microsporidia and Cryptomycota.

artículo científico publicado en 2018

Colpodean ciliate phylogeny and reference alignments for phylogenetic placements

scientific article published on 10 November 2020

Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys

artículo científico publicado en 2014

Comparing the hyper-variable V4 and V9 regions of the small subunit rDNA for assessment of ciliate environmental diversity

artículo científico publicado en 2012

Comparison of three clustering approaches for detecting novel environmental microbial diversity

artículo científico publicado en 2016

Congruence and indifference between two molecular markers for understanding oral evolution in the Marynidae sensu lato (Ciliophora, Colpodea)

artículo científico publicado en 2012

Consistent patterns of high alpha and low beta diversity in tropical parasitic and free-living protists

scientific article published on 17 June 2018

Cryptic sex in Symbiodinium (Alveolata, Dinoflagellata) is supported by an inventory of meiotic genes

artículo científico publicado en 2014

Deep sequencing uncovers protistan plankton diversity in the Portuguese Ria Formosa solar saltern ponds

artículo científico publicado en 2014

Delimiting operational taxonomic units for assessing ciliate environmental diversity using small-subunit rRNA gene sequences

artículo científico publicado en 2011

Diatom diversity through HTS-metabarcoding in coastal European seas

scientific article published in Scientific Reports

Evaluating support for the current classification of eukaryotic diversity ⬇️

artículo científico publicado en 2006

Expanding character sampling for ciliate phylogenetic inference using mitochondrial SSU-rDNA as a molecular marker

artículo científico publicado en 2010

Expanding character sampling for the molecular phylogeny of euplotid ciliates (Protozoa, Ciliophora) using three markers, with a focus on the family Uronychiidae

artículo científico publicado en 2012

Fossil Tintinnids

Heterogeneous rates of molecular evolution among cryptic species of the ciliate morphospecies Chilodonella uncinata.

artículo científico publicado en 2011

Identification of the pathogenic ciliate Pseudocohnilembus persalinus (Oligohymenophorea: Scuticociliatia) by fluorescence in situ hybridization

artículo científico publicado en 2013

Increasing taxon sampling using both unidentified environmental sequences and identified cultures improves phylogenetic inference in the Prorodontida (Ciliophora, Prostomatea).

artículo científico publicado en 2010

Intraclass evolution and classification of the Colpodea (Ciliophora).

artículo científico publicado en 2011

Many neglected tropical diseases may have originated in the Paleolithic or before: new insights from genetics

artículo científico publicado en 2012

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

artículo científico publicado en 2015

Meiosis gene inventory of four ciliates reveals the prevalence of a synaptonemal complex-independent crossover pathway

artículo científico publicado en 2013

Meiotic Genes in Colpodean Ciliates Support Secretive Sexuality

artículo científico

Molecular diversity and distribution of marine fungi across 130 European environmental samples

artículo científico publicado en 2015

Molecular phylogenetic analysis of class Colpodea (phylum Ciliophora) using broad taxon sampling

artículo científico publicado en 2007

New SSU-rDNA sequences for eleven colpodeans (Ciliophora, Colpodea) and description of Apocyrtolophosis nov. gen.

artículo científico publicado en 2013

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

artículo científico publicado en 2015

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

article

Patterns of rare and abundant marine microbial eukaryotes

artículo científico publicado en 2014

Perspectives from Ten Years of Protist Studies by High-Throughput Metabarcoding

scientific article published on 04 June 2020

Phylogenetic placement of the Cyrtolophosididae Stokes, 1888 (Ciliophora; Colpodea) and neotypification of Aristerostoma marinum Kahl, 1931.

artículo científico publicado en 2009

Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context

artículo científico publicado en 2014

Protist Biodiversity and Biogeography in Lakes From Four Brazilian River-Floodplain Systems

scientific article published on 21 December 2018

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems

artículo científico publicado en 2020

Putatively asexual chrysophytes have meiotic genes: evidence from transcriptomic data

article

Report of the 2014 joint workshop of the international research coordination network for biodiversity of ciliates and the british society for protist biology

artículo científico publicado en 2015

Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes ⬇️

artículo científico publicado en 2019

Richness of morphological hypotheses in ciliate systematics allows for detailed assessment of homology and comparisons with gene trees ⬇️

artículo científico publicado en 2008

Secretive ciliates and putative asexuality in microbial eukaryotes.

artículo científico publicado en 2010

Soil Protists in Three Neotropical Rainforests are Hyperdiverse and Dominated by Parasites

scholarly article published 29 April 2016

Soil protistology rebooted: 30 fundamental questions to start with

scholarly article by Stefan Geisen et al published August 2017 in Soil Biology and Biochemistry

Soil protists: a fertile frontier in soil biology research

artículo científico publicado en 2018

Swarm v2: highly-scalable and high-resolution amplicon clustering

artículo científico publicado en 2015

Swarm: robust and fast clustering method for amplicon-based studies

artículo científico publicado en 2014

Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms

artículo científico publicado en 2015

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy

artículo científico publicado en 2012

The Revised Classification of Eukaryotes

artículo científico

The Windblown: Possible Explanations for Dinophyte DNA in Forest Soils

artículo científico publicado en 2020

The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition

scientific article published on 14 September 2018

The chaos prevails: molecular phylogeny of the Haptoria (Ciliophora, Litostomatea).

artículo científico publicado en 2013

UniEuk: Time to Speak a Common Language in Protistology!

artículo científico publicado en 2017

Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean

artículo científico publicado en 2018

Yeasts dominate soil fungal communities in three lowland Neotropical rainforests

artículo científico publicado en 2017

Lista de obras de

"Candidatus Haloectosymbiotes riaformosensis" (Halobacteriaceae), an archaeal ectosymbiont of the hypersaline ciliate Platynematum salinarum

Above‐ and below‐ground biodiversity responses to the prolonged flood pulse in central‐western Amazonia, Brazil

Advancing biodiversity assessments with environmental DNA: Long-read technologies help reveal the drivers of Amazonian fungal diversity

Assessing Biotic and Abiotic Interactions of Microorganisms in Amazonia through Co-Occurrence Networks and DNA Metabarcoding

Benthic protists: the under-charted majority

Beyond the "Code": A Guide to the Description and Documentation of Biodiversity in Ciliated Protists (Alveolata, Ciliophora).

CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms

Ciliate SSU-rDNA reference alignments and trees for phylogenetic placements of metabarcoding data

Ciliates and the rare biosphere: a review

Ciliates — Protists with complex morphologies and ambiguous early fossil record

Clarifying the Relationships between Microsporidia and Cryptomycota.

Colpodean ciliate phylogeny and reference alignments for phylogenetic placements

Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys

Comparing the hyper-variable V4 and V9 regions of the small subunit rDNA for assessment of ciliate environmental diversity

Comparison of three clustering approaches for detecting novel environmental microbial diversity

Congruence and indifference between two molecular markers for understanding oral evolution in the Marynidae sensu lato (Ciliophora, Colpodea)

Consistent patterns of high alpha and low beta diversity in tropical parasitic and free-living protists

Cryptic sex in Symbiodinium (Alveolata, Dinoflagellata) is supported by an inventory of meiotic genes

Deep sequencing uncovers protistan plankton diversity in the Portuguese Ria Formosa solar saltern ponds

Delimiting operational taxonomic units for assessing ciliate environmental diversity using small-subunit rRNA gene sequences

Diatom diversity through HTS-metabarcoding in coastal European seas

Evaluating support for the current classification of eukaryotic diversity ⬇️

Expanding character sampling for ciliate phylogenetic inference using mitochondrial SSU-rDNA as a molecular marker

Expanding character sampling for the molecular phylogeny of euplotid ciliates (Protozoa, Ciliophora) using three markers, with a focus on the family Uronychiidae

Fossil Tintinnids

Heterogeneous rates of molecular evolution among cryptic species of the ciliate morphospecies Chilodonella uncinata.

Identification of the pathogenic ciliate Pseudocohnilembus persalinus (Oligohymenophorea: Scuticociliatia) by fluorescence in situ hybridization

Increasing taxon sampling using both unidentified environmental sequences and identified cultures improves phylogenetic inference in the Prorodontida (Ciliophora, Prostomatea).

Intraclass evolution and classification of the Colpodea (Ciliophora).

Many neglected tropical diseases may have originated in the Paleolithic or before: new insights from genetics

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Meiosis gene inventory of four ciliates reveals the prevalence of a synaptonemal complex-independent crossover pathway

Meiotic Genes in Colpodean Ciliates Support Secretive Sexuality

Molecular diversity and distribution of marine fungi across 130 European environmental samples

Molecular phylogenetic analysis of class Colpodea (phylum Ciliophora) using broad taxon sampling

New SSU-rDNA sequences for eleven colpodeans (Ciliophora, Colpodea) and description of Apocyrtolophosis nov. gen.

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

Patterns of rare and abundant marine microbial eukaryotes

Perspectives from Ten Years of Protist Studies by High-Throughput Metabarcoding

Phylogenetic placement of the Cyrtolophosididae Stokes, 1888 (Ciliophora; Colpodea) and neotypification of Aristerostoma marinum Kahl, 1931.

Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context

Protist Biodiversity and Biogeography in Lakes From Four Brazilian River-Floodplain Systems

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems

Putatively asexual chrysophytes have meiotic genes: evidence from transcriptomic data

Report of the 2014 joint workshop of the international research coordination network for biodiversity of ciliates and the british society for protist biology

Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes ⬇️

Richness of morphological hypotheses in ciliate systematics allows for detailed assessment of homology and comparisons with gene trees ⬇️

Secretive ciliates and putative asexuality in microbial eukaryotes.

Soil Protists in Three Neotropical Rainforests are Hyperdiverse and Dominated by Parasites

Soil protistology rebooted: 30 fundamental questions to start with

Soil protists: a fertile frontier in soil biology research

Swarm v2: highly-scalable and high-resolution amplicon clustering

Swarm: robust and fast clustering method for amplicon-based studies

Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy

The Revised Classification of Eukaryotes

The Windblown: Possible Explanations for Dinophyte DNA in Forest Soils

The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition

The chaos prevails: molecular phylogeny of the Haptoria (Ciliophora, Litostomatea).

UniEuk: Time to Speak a Common Language in Protistology!

Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean

Yeasts dominate soil fungal communities in three lowland Neotropical rainforests