Lista de obras -

A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: validation using the bovine mammary transcriptome

artículo científico publicado en 2012

A python analytical pipeline to identify prohormone precursors and predict prohormone cleavage sites

artículo científico publicado en 2008

Accurate assignment of significance to neuropeptide identifications using Monte Carlo k-permuted decoy databases

artículo científico publicado en 2014

An analysis of survey data by size of the breeding herd for the reproductive management practices of North American sow farms ⬇️

artículo científico publicado el 24 de octubre de 2012

Analyses of pig genomes provide insight into porcine demography and evolution

artículo científico publicado en 2012

Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states ⬇️

artículo científico publicado el 29 de septiembre de 2011

Bivariate genome-wide association analysis of the growth and intake components of feed efficiency

artículo científico publicado en 2013

Brain gene expression changes elicited by peripheral vitellogenin knockdown in the honey bee ⬇️

artículo científico publicado el 24 de julio de 2013

Brain region-dependent gene networks associated with selective breeding for increased voluntary wheel-running behavior

scientific article published in PLoS ONE

Cell cycle and aging, morphogenesis, and response to stimuli genes are individualized biomarkers of glioblastoma progression and survival

artículo científico publicado en 2011

Characterization of Genomic Variants Associated with Scout and Recruit Behavioral Castes in Honey Bees Using Whole-Genome Sequencing

artículo científico publicado en 2016

Comprehensive Identification of Sexual Dimorphism-Associated Differentially Expressed Genes in Two-Way Factorial Designed RNA-Seq Data on Japanese Quail (Coturnix coturnix japonica).

artículo científico publicado en 2015

Comprehensive identification of sexually dimorphic genes in diverse cattle tissues using RNA-seq

artículo científico publicado en 2016

Differential Transcriptome Networks between IDO1-Knockout and Wild-Type Mice in Brain Microglia and Macrophages

artículo científico publicado en 2016

Discrete molecular states in the brain accompany changing responses to a vocal signal

artículo científico publicado en 2009

Effects of maternal immune activation in porcine transcript isoforms of neuropeptide and receptor genes

artículo científico publicado en 2021

Enhanced Understanding of Molecular Interactions and Function Underlying Pain Processes Through Networks of Transcript Isoforms, Genes, and Gene Families

artículo científico publicado en 2021

Fine-mapping of a QTL influencing pork tenderness on porcine chromosome 2.

artículo científico publicado en 2007

First survey and functional annotation of prohormone and convertase genes in the pig.

artículo científico publicado en 2012

Functional and gene network analyses of transcriptional signatures characterizing pre-weaned bovine mammary parenchyma or fat pad uncovered novel inter-tissue signaling networks during development

artículo científico publicado en 2010

Gene network and pathway analysis of bovine mammary tissue challenged with Streptococcus uberis reveals induction of cell proliferation and inhibition of PPARgamma signaling as potential mechanism for the negative relationships between immune [...]

artículo científico publicado en 2009

Genomic dissection of behavioral maturation in the honey bee.

artículo científico publicado en 2006

Global gene expression profiles reveal significant nuclear reprogramming by the blastocyst stage after cloning

artículo científico publicado en 2005

Identification and characterization of alternative exon usage linked glioblastoma multiforme survival ⬇️

artículo científico publicado el 4 de diciembre de 2012

Identification and ranking of genetic and laboratory environment factors influencing a behavioral trait, thermal nociception, via computational analysis of a large data archive

artículo científico publicado en 2002

In Silico Mapping of Mouse Quantitative Trait Loci ⬇️

artículo científico publicado el 21 de diciembre de 2001

Inference of gene pathways using mixture Bayesian networks

artículo científico publicado en 2009

Influence of hormone supplementation to extended semen on artificial insemination, uterine contractions, establishment of a sperm reservoir, and fertility in swine1,2 ⬇️

artículo científico publicado el 1 de abril de 2003

Integrative analyses of hepatic differentially expressed genes and blood biomarkers during the peripartal period between dairy cows overfed or restricted-fed energy prepartum

artículo científico publicado en 2014

Mammary gene expression profiles during an intramammary challenge reveal potential mechanisms linking negative energy balance with impaired immune response

artículo científico publicado en 2010

Maternal Plane of Nutrition during Late Gestation and Weaning Age Alter Angus × Simmental Offspring Longissimus Muscle Transcriptome and Intramuscular Fat.

artículo científico publicado en 2015

Mechanisms of stable lipid loss in a social insect ⬇️

artículo científico publicado el 15 de noviembre de 2011

Meta-analysis of genome-wide expression patterns associated with behavioral maturation in honey bees

artículo científico publicado en 2008

Microarray analysis of natural socially regulated plasticity in circadian rhythms of honey bees

artículo científico publicado en 2012

Microglia Transcriptome Changes in a Model of Depressive Behavior after Immune Challenge

artículo científico publicado en 2016

Modulatory communication signal performance is associated with a distinct neurogenomic state in honey bees

artículo científico publicado en 2009

NeuroPred: a tool to predict cleavage sites in neuropeptide precursors and provide the masses of the resulting peptides

artículo científico publicado en 2006

Neurogenomic signatures of spatiotemporal memories in time-trained forager honey bees

artículo científico publicado en 2011

New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior

artículo científico publicado en 2012

Old and new stories: revelations from functional analysis of the bovine mammary transcriptome during the lactation cycle

artículo científico publicado en 2012

Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens

scientific article published on 25 May 2019

Semiparametric approach to characterize unique gene expression trajectories across time

artículo científico publicado en 2006

Single nucleotide polymorphisms and haplotypes associated with feed efficiency in beef cattle

artículo científico publicado en 2013

Space allowance for gestating sows in pens: Behavior and immunity1 ⬇️

artículo científico publicado el 7 de agosto de 2012

Synergistic and antagonistic interplay between myostatin gene expression and physical activity levels on gene expression patterns in triceps Brachii muscles of C57/BL6 mice

artículo científico publicado en 2015

Terpenoid Backbone Biosynthesis among Pig Hippocampal Pathways Impacted by Stressors

artículo científico publicado en 2022

The Songbird Neurogenomics (SoNG) Initiative: community-based tools and strategies for study of brain gene function and evolution

artículo científico publicado en 2008

The Transcription Factor Ultraspiracle Influences Honey Bee Social Behavior and Behavior-Related Gene Expression ⬇️

artículo científico publicado el 29 de marzo de 2012

The genome sequence of taurine cattle: a window to ruminant biology and evolution

artículo científico publicado en 2009

The zebra finch neuropeptidome: prediction, detection and expression

artículo científico publicado en 2010

Trans-10,cis12-Conjugated Linoleic Acid-Induced Milk Fat Depression Is Associated with Inhibition of PPARγSignaling and Inflammation in Murine Mammary Tissue ⬇️

artículo científico publicado el 14 de mayo de 2013

Transcription factor-microRNA-target gene networks associated with ovarian cancer survival and recurrence

artículo científico publicado en 2013

Transcriptomic profiling of central nervous system regions in three species of honey bee during dance communication behavior

artículo científico publicado en 2009

Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation

artículo científico publicado en 2012

Transferase activity function and system development process are critical in cattle embryo development

artículo científico publicado en 2010

Voluntary wheel running reverses age-induced changes in hippocampal gene expression

artículo científico publicado en 2011

Lista de obras de

A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: validation using the bovine mammary transcriptome

A python analytical pipeline to identify prohormone precursors and predict prohormone cleavage sites

Accurate assignment of significance to neuropeptide identifications using Monte Carlo k-permuted decoy databases

An analysis of survey data by size of the breeding herd for the reproductive management practices of North American sow farms ⬇️

Analyses of pig genomes provide insight into porcine demography and evolution

Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states ⬇️

Bivariate genome-wide association analysis of the growth and intake components of feed efficiency

Brain gene expression changes elicited by peripheral vitellogenin knockdown in the honey bee ⬇️

Brain region-dependent gene networks associated with selective breeding for increased voluntary wheel-running behavior

Cell cycle and aging, morphogenesis, and response to stimuli genes are individualized biomarkers of glioblastoma progression and survival

Characterization of Genomic Variants Associated with Scout and Recruit Behavioral Castes in Honey Bees Using Whole-Genome Sequencing

Comprehensive Identification of Sexual Dimorphism-Associated Differentially Expressed Genes in Two-Way Factorial Designed RNA-Seq Data on Japanese Quail (Coturnix coturnix japonica).

Comprehensive identification of sexually dimorphic genes in diverse cattle tissues using RNA-seq

Differential Transcriptome Networks between IDO1-Knockout and Wild-Type Mice in Brain Microglia and Macrophages

Discrete molecular states in the brain accompany changing responses to a vocal signal

Effects of maternal immune activation in porcine transcript isoforms of neuropeptide and receptor genes

Enhanced Understanding of Molecular Interactions and Function Underlying Pain Processes Through Networks of Transcript Isoforms, Genes, and Gene Families

Fine-mapping of a QTL influencing pork tenderness on porcine chromosome 2.

First survey and functional annotation of prohormone and convertase genes in the pig.

Functional and gene network analyses of transcriptional signatures characterizing pre-weaned bovine mammary parenchyma or fat pad uncovered novel inter-tissue signaling networks during development

Gene network and pathway analysis of bovine mammary tissue challenged with Streptococcus uberis reveals induction of cell proliferation and inhibition of PPARgamma signaling as potential mechanism for the negative relationships between immune [...]

Genomic dissection of behavioral maturation in the honey bee.

Global gene expression profiles reveal significant nuclear reprogramming by the blastocyst stage after cloning

Identification and characterization of alternative exon usage linked glioblastoma multiforme survival ⬇️

Identification and ranking of genetic and laboratory environment factors influencing a behavioral trait, thermal nociception, via computational analysis of a large data archive

In Silico Mapping of Mouse Quantitative Trait Loci ⬇️

Inference of gene pathways using mixture Bayesian networks

Influence of hormone supplementation to extended semen on artificial insemination, uterine contractions, establishment of a sperm reservoir, and fertility in swine1,2 ⬇️

Integrative analyses of hepatic differentially expressed genes and blood biomarkers during the peripartal period between dairy cows overfed or restricted-fed energy prepartum

Mammary gene expression profiles during an intramammary challenge reveal potential mechanisms linking negative energy balance with impaired immune response

Maternal Plane of Nutrition during Late Gestation and Weaning Age Alter Angus × Simmental Offspring Longissimus Muscle Transcriptome and Intramuscular Fat.

Mechanisms of stable lipid loss in a social insect ⬇️

Meta-analysis of genome-wide expression patterns associated with behavioral maturation in honey bees

Microarray analysis of natural socially regulated plasticity in circadian rhythms of honey bees

Microglia Transcriptome Changes in a Model of Depressive Behavior after Immune Challenge

Modulatory communication signal performance is associated with a distinct neurogenomic state in honey bees

NeuroPred: a tool to predict cleavage sites in neuropeptide precursors and provide the masses of the resulting peptides

Neurogenomic signatures of spatiotemporal memories in time-trained forager honey bees

New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior

Old and new stories: revelations from functional analysis of the bovine mammary transcriptome during the lactation cycle

Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens

Semiparametric approach to characterize unique gene expression trajectories across time

Single nucleotide polymorphisms and haplotypes associated with feed efficiency in beef cattle

Space allowance for gestating sows in pens: Behavior and immunity1 ⬇️

Synergistic and antagonistic interplay between myostatin gene expression and physical activity levels on gene expression patterns in triceps Brachii muscles of C57/BL6 mice

Terpenoid Backbone Biosynthesis among Pig Hippocampal Pathways Impacted by Stressors

The Songbird Neurogenomics (SoNG) Initiative: community-based tools and strategies for study of brain gene function and evolution

The Transcription Factor Ultraspiracle Influences Honey Bee Social Behavior and Behavior-Related Gene Expression ⬇️

The genome sequence of taurine cattle: a window to ruminant biology and evolution

The zebra finch neuropeptidome: prediction, detection and expression

Trans-10,cis12-Conjugated Linoleic Acid-Induced Milk Fat Depression Is Associated with Inhibition of PPARγSignaling and Inflammation in Murine Mammary Tissue ⬇️

Transcription factor-microRNA-target gene networks associated with ovarian cancer survival and recurrence

Transcriptomic profiling of central nervous system regions in three species of honey bee during dance communication behavior

Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation

Transferase activity function and system development process are critical in cattle embryo development

Voluntary wheel running reverses age-induced changes in hippocampal gene expression