Lista de obras -

A Flexible Approach for Highly Multiplexed Candidate Gene Targeted Resequencing ⬇️

artículo científico publicado el 30 de junio de 2011

A microRNA expression and regulatory element activity atlas of the mouse immune system

artículo científico publicado en 2021

ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing

artículo científico publicado en 2016

ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide ⬇️

artículo científico publicado en 2015

Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields

artículo científico publicado en 2020

Arctic mustard flower color polymorphism controlled by petal-specific downregulation at the threshold of the anthocyanin biosynthetic pathway

artículo científico publicado en 2011

Assessment of computational methods for the analysis of single-cell ATAC-seq data

artículo científico publicado en 2019

Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin

artículo científico publicado en 2020

Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans.

artículo científico publicado en 2017

Chromatin accessibility dynamics reveal novel functional enhancers inC. elegans

Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome

artículo científico publicado en 2017

Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms

artículo científico publicado en 2016

Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms

Corticosterone inhibits GAS6 to govern hair follicle stem-cell quiescence

artículo científico publicado en 2021

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram

artículo científico publicado en 2021

Deep learning and alignment of spatially-resolved whole transcriptomes of single cells in the mouse brain with Tangram ⬇️

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Deterministic Somatic Cell Reprogramming Involves Continuous Transcriptional Changes Governed by Myc and Epigenetic-Driven Modules

scientific article published on 13 December 2018

Direct, High-Throughput Measurement of Quantitative RNA Affinity Landscapes

Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility

artículo científico publicado en 2019

Efficient targeted resequencing of human germline and cancer genomes by oligonucleotide-selective sequencing

artículo científico publicado en 2011

Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung Adenocarcinoma

artículo científico publicado en 2020

Epigenomics of human CD8 T cell differentiation and aging

artículo científico publicado en 2017

Exome sequencing identifies a DNAJB6 mutation in a family with dominantly-inherited limb-girdle muscular dystrophy

artículo científico publicado en 2014

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

article

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types.

artículo científico publicado en 2018

Hyperactivation of sympathetic nerves drives depletion of melanocyte stem cells

scientific article published on 22 January 2020

In situ genome sequencing resolves DNA sequence and structure in intact biological samples

artículo científico publicado en 2020

Induction and transcriptional regulation of the co-inhibitory gene module in T cells

artículo científico publicado en 2018

Inference and effects of barcode multiplets in droplet-based single-cell assays

artículo científico publicado en 2020

Integrated Single-Cell Analysis Maps the Continuous Regulatory Landscape of Human Hematopoietic Differentiation.

artículo científico publicado en 2018

Interrogation of human hematopoiesis at single-cell and single-variant resolution

scholarly article published 28 January 2018

Interrogation of human hematopoiesis at single-cell and single-variant resolution

artículo científico publicado en 2019

Leukemia-Associated Cohesin Mutants Dominantly Enforce Stem Cell Programs and Impair Human Hematopoietic Progenitor Differentiation

artículo científico publicado en 2015

Lineage Tracing in Humans Enabled by Mitochondrial Mutations and Single-Cell Genomics

artículo científico publicado en 2019

Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution

artículo científico publicado en 2016

Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling

scientific article published on 12 August 2020

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naïve Pluripotency

Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

artículo científico publicado en 2018

PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes

artículo científico publicado en 2017

Proper acquisition of cell class identity in organoids allows definition of fate specification programs of the human cerebral cortex

artículo científico publicado en 2022

Protocol for single-cell ATAC sequencing using combinatorial indexing in mouse lung adenocarcinoma

artículo científico publicado en 2021

Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries

artículo científico publicado en 2013

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes

artículo científico publicado en 2014

Rapid chromatin repression by Aire provides precise control of immune tolerance

artículo científico publicado en 2018

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data

Single-cell and single-molecule epigenomics to uncover genome regulation at unprecedented resolution

scientific article published on 17 December 2018

Single-cell chromatin accessibility reveals principles of regulatory variation

artículo científico publicado en 2015

Single-cell epigenomic variability reveals functional cancer heterogeneity

artículo científico publicado en 2017

Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM

artículo científico publicado en 2019

Spatial genomics enables multi-modal study of clonal heterogeneity in tissues

artículo científico publicado en 2021

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

artículo científico publicado en 2015

Sustained Activation of AMPK Enhances Differentiation of Human iPSC-Derived Cardiomyocytes via Sirtuin Activation

artículo científico publicado en 2020

Systematic benchmarking of single-cell ATAC-sequencing protocols

artículo científico publicado en 2023

TOP2 synergizes with BAF chromatin remodeling for both resolution and formation of facultative heterochromatin

artículo científico publicado en 2017

The Molecular and Functional Foundations of Conducive Somatic Cell Reprogramming to Ground State Pluripotency

The cis-Regulatory Atlas of the Mouse Immune System

artículo científico publicado en 2019

Transcript-indexed ATAC-seq for precision immune profiling.

artículo científico publicado en 2018

Transcriptional States and Chromatin Accessibility Underlying Human Erythropoiesis

artículo científico publicado en 2019

Transient acquisition of pluripotency during somatic cell transdifferentiation with iPSC reprogramming factors

artículo científico publicado en 2015

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

artículo científico publicado en 2013

Ultrasensitive detection of rare mutations using next-generation targeted resequencing

artículo científico publicado en 2011

chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data

artículo científico publicado en 2017

Lista de obras de

A Flexible Approach for Highly Multiplexed Candidate Gene Targeted Resequencing ⬇️

A microRNA expression and regulatory element activity atlas of the mouse immune system

ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing

ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide ⬇️

Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields

Arctic mustard flower color polymorphism controlled by petal-specific downregulation at the threshold of the anthocyanin biosynthetic pathway

Assessment of computational methods for the analysis of single-cell ATAC-seq data

Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin

Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans.

Chromatin accessibility dynamics reveal novel functional enhancers inC. elegans

Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome

Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms

Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms

Corticosterone inhibits GAS6 to govern hair follicle stem-cell quiescence

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram

Deep learning and alignment of spatially-resolved whole transcriptomes of single cells in the mouse brain with Tangram ⬇️

Deterministic Somatic Cell Reprogramming Involves Continuous Transcriptional Changes Governed by Myc and Epigenetic-Driven Modules

Direct, High-Throughput Measurement of Quantitative RNA Affinity Landscapes

Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility

Efficient targeted resequencing of human germline and cancer genomes by oligonucleotide-selective sequencing

Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung Adenocarcinoma

Epigenomics of human CD8 T cell differentiation and aging

Exome sequencing identifies a DNAJB6 mutation in a family with dominantly-inherited limb-girdle muscular dystrophy

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types.

Hyperactivation of sympathetic nerves drives depletion of melanocyte stem cells

In situ genome sequencing resolves DNA sequence and structure in intact biological samples

Induction and transcriptional regulation of the co-inhibitory gene module in T cells

Inference and effects of barcode multiplets in droplet-based single-cell assays

Integrated Single-Cell Analysis Maps the Continuous Regulatory Landscape of Human Hematopoietic Differentiation.

Interrogation of human hematopoiesis at single-cell and single-variant resolution

Interrogation of human hematopoiesis at single-cell and single-variant resolution

Leukemia-Associated Cohesin Mutants Dominantly Enforce Stem Cell Programs and Impair Human Hematopoietic Progenitor Differentiation

Lineage Tracing in Humans Enabled by Mitochondrial Mutations and Single-Cell Genomics

Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution

Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naïve Pluripotency

Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes

Proper acquisition of cell class identity in organoids allows definition of fate specification programs of the human cerebral cortex

Protocol for single-cell ATAC sequencing using combinatorial indexing in mouse lung adenocarcinoma

Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes

Rapid chromatin repression by Aire provides precise control of immune tolerance

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data

Single-cell and single-molecule epigenomics to uncover genome regulation at unprecedented resolution

Single-cell chromatin accessibility reveals principles of regulatory variation

Single-cell epigenomic variability reveals functional cancer heterogeneity

Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM

Spatial genomics enables multi-modal study of clonal heterogeneity in tissues

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

Sustained Activation of AMPK Enhances Differentiation of Human iPSC-Derived Cardiomyocytes via Sirtuin Activation

Systematic benchmarking of single-cell ATAC-sequencing protocols

TOP2 synergizes with BAF chromatin remodeling for both resolution and formation of facultative heterochromatin

The Molecular and Functional Foundations of Conducive Somatic Cell Reprogramming to Ground State Pluripotency

The cis-Regulatory Atlas of the Mouse Immune System

Transcript-indexed ATAC-seq for precision immune profiling.

Transcriptional States and Chromatin Accessibility Underlying Human Erythropoiesis

Transient acquisition of pluripotency during somatic cell transdifferentiation with iPSC reprogramming factors

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Ultrasensitive detection of rare mutations using next-generation targeted resequencing

chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data