Lista de obras -

AMT tag approach to proteomic characterization of Deinococcus radiodurans and Shewanella oneidensis.

artículo científico publicado en 2006

Biodegradation of polycyclic aromatic hydrocarbons by Sphingomonas strains isolated from the terrestrial subsurface

artículo científico publicado en 2001

Biofilm shows spatially stratified metabolic responses to contaminant exposure

artículo científico publicado en 2012

Characterization of an electron conduit between bacteria and the extracellular environment

artículo científico publicado en 2009

Comparative systems biology across an evolutionary gradient within the Shewanella genus.

artículo científico publicado en 2009

Conserved synteny at the protein family level reveals genes underlying Shewanella species' cold tolerance and predicts their novel phenotypes

artículo científico publicado en 2009

Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation

artículo científico publicado en 2010

Coupling Spatiotemporal Community Assembly Processes to Changes in Microbial Metabolism.

artículo científico publicado en 2016

Coupling among Microbial Communities, Biogeochemistry, and Mineralogy across Biogeochemical Facies

artículo científico publicado en 2016

Deterministic influences exceed dispersal effects on hydrologically-connected microbiomes.

artículo científico publicado en 2017

Distribution of microbial biomass and potential for anaerobic respiration in Hanford Site 300 Area subsurface sediment

artículo científico publicado en 2011

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth

artículo científico publicado en 2012

Dynamics in microbial communities: unraveling mechanisms to identify principles

artículo científico publicado en 2014

Ecology, physiology, and phylogeny of deep subsurface Sphingomonas sp.

artículo científico publicado en 1999

Editorial: Systems Biology and Ecology of Microbial Mat Communities

artículo científico publicado en 2016

Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms

artículo científico publicado en 2006

Engineering microbial consortia for controllable outputs

artículo científico publicado en 2016

Estimating and mapping ecological processes influencing microbial community assembly

artículo científico publicado en 2015

Exploring the biochemistry at the extracellular redox frontier of bacterial mineral Fe(III) respiration.

artículo científico

Fe(III) reduction and U(VI) immobilization by Paenibacillus sp. strain 300A, isolated from Hanford 300A subsurface sediments.

artículo científico publicado en 2012

Genome Sequence of the Thermophilic Cyanobacterium Thermosynechococcus sp. Strain NK55a

artículo científico publicado en 2014

Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142

artículo científico publicado en 2012

Genomic encyclopedia of sugar utilization pathways in the Shewanella genus

artículo científico publicado en 2010

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization

scholarly article

Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags

artículo científico publicado en 2002

Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations

artículo científico publicado en 2005

Groundwater-surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover

artículo científico publicado en 2016

In Situ Molecular Imaging of the Biofilm and Its Matrix.

artículo científico publicado en 2016

In situ effective diffusion coefficient profiles in live biofilms using pulsed-field gradient nuclear magnetic resonance

artículo científico publicado en 2010

Indirect Interspecies Regulation: Transcriptional and Physiological Responses of a Cyanobacterium to Heterotrophic Partnership

artículo científico publicado en 2017

Induction of aromatic catabolic activity in Sphingomonas aromaticivorans strain F199.

artículo científico publicado en 1999

Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing

artículo científico publicado en 2014

Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology.

artículo científico publicado en 2018

Integrating Ecological and Engineering Concepts of Resilience in Microbial Communities

artículo científico publicado en 2015

MetFish: a Metabolomics Pipeline for Studying Microbial Communities in Chemically Extreme Environments

artículo científico publicado en 2021

Modeling biofilms with dual extracellular electron transfer mechanisms

artículo científico publicado en 2013

Persistence of uranium groundwater plumes: contrasting mechanisms at two DOE sites in the groundwater-river interaction zone

artículo científico publicado en 2013

Phototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions

artículo científico publicado en 2014

Preparation and evaluation of spore-specific affinity-augmented bio-imprinted beads

artículo científico publicado en 2006

Publisher Correction: Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology

artículo científico publicado en 2018

Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions

artículo científico publicado en 2011

Quantifying community assembly processes and identifying features that impose them

artículo científico publicado en 2013

Redox Linked Flavin Sites in Extracellular Decaheme Proteins Involved in Microbe-Mineral Electron Transfer

artículo científico publicado en 2015

Redox reactions of reduced flavin mononucleotide (FMN), riboflavin (RBF), and anthraquinone-2,6-disulfonate (AQDS) with ferrihydrite and lepidocrocite

artículo científico publicado en 2012

Reduction kinetics of Fe(III), Co(III), U(VI), Cr(VI), and Tc(VII) in cultures of dissimilatory metal-reducing bacteria

artículo científico publicado en 2002

Regulation-Structured Dynamic Metabolic Model Provides a Potential Mechanism for Delayed Enzyme Response in Denitrification Process

artículo científico publicado en 2017

Related assemblages of sulphate-reducing bacteria associated with ultradeep gold mines of South Africa and deep basalt aquifers of Washington State

artículo científico publicado en 2003

Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c-type cytochromes

artículo científico publicado en 2007

Shewanella loihica sp. nov., isolated from iron-rich microbial mats in the Pacific Ocean

artículo científico publicado en 2006

Shifts in archaeal communities associated with lithological and geochemical variations in subsurface Cretaceous rock

artículo científico publicado en 2003

Single-Cell Imaging and Spectroscopic Analyses of Cr(VI) Reduction on the Surface of Bacterial Cells ⬇️

artículo científico publicado el 9 de enero de 2013

Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer

artículo científico publicado en 2014

Spatial and temporal dynamics of the microbial community in the Hanford unconfined aquifer

artículo científico publicado en 2012

Stochastic and deterministic assembly processes in subsurface microbial communities

artículo científico publicado en 2012

Sustained H 2 Production Driven by Photosynthetic Water Splitting in a Unicellular Cyanobacterium ⬇️

artículo científico publicado el 7 de agosto de 2012

The 'porin-cytochrome' model for microbe-to-mineral electron transfer.

artículo científico

The X-ray crystal structure of Shewanella oneidensis OmcA reveals new insight at the microbe-mineral interface

artículo científico publicado en 2014

The role of multihaem cytochromes in the respiration of nitrite in Escherichia coli and Fe(III) in Shewanella oneidensis

artículo científico publicado en 2008

Trends and future challenges in sampling the deep terrestrial biosphere

artículo científico publicado en 2014

Unlocking the Constraints of Cyanobacterial Productivity: Acclimations Enabling Ultrafast Growth

artículo científico publicado en 2016

Utilization of DNA as a sole source of phosphorus, carbon, and energy by Shewanella spp.: ecological and physiological implications for dissimilatory metal reduction

artículo científico publicado en 2007

Validation of Shewanella oneidensis MR-1 small proteins by AMT tag-based proteome analysis

artículo científico publicado en 2004

Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site

artículo científico publicado en 2011

Lista de obras de

AMT tag approach to proteomic characterization of Deinococcus radiodurans and Shewanella oneidensis.

Biodegradation of polycyclic aromatic hydrocarbons by Sphingomonas strains isolated from the terrestrial subsurface

Biofilm shows spatially stratified metabolic responses to contaminant exposure

Characterization of an electron conduit between bacteria and the extracellular environment

Comparative systems biology across an evolutionary gradient within the Shewanella genus.

Conserved synteny at the protein family level reveals genes underlying Shewanella species' cold tolerance and predicts their novel phenotypes

Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation

Coupling Spatiotemporal Community Assembly Processes to Changes in Microbial Metabolism.

Coupling among Microbial Communities, Biogeochemistry, and Mineralogy across Biogeochemical Facies

Deterministic influences exceed dispersal effects on hydrologically-connected microbiomes.

Distribution of microbial biomass and potential for anaerobic respiration in Hanford Site 300 Area subsurface sediment

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth

Dynamics in microbial communities: unraveling mechanisms to identify principles

Ecology, physiology, and phylogeny of deep subsurface Sphingomonas sp.

Editorial: Systems Biology and Ecology of Microbial Mat Communities

Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms

Engineering microbial consortia for controllable outputs

Estimating and mapping ecological processes influencing microbial community assembly

Exploring the biochemistry at the extracellular redox frontier of bacterial mineral Fe(III) respiration.

Fe(III) reduction and U(VI) immobilization by Paenibacillus sp. strain 300A, isolated from Hanford 300A subsurface sediments.

Genome Sequence of the Thermophilic Cyanobacterium Thermosynechococcus sp. Strain NK55a

Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142

Genomic encyclopedia of sugar utilization pathways in the Shewanella genus

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization

Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags

Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations

Groundwater-surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover

In Situ Molecular Imaging of the Biofilm and Its Matrix.

In situ effective diffusion coefficient profiles in live biofilms using pulsed-field gradient nuclear magnetic resonance

Indirect Interspecies Regulation: Transcriptional and Physiological Responses of a Cyanobacterium to Heterotrophic Partnership

Induction of aromatic catabolic activity in Sphingomonas aromaticivorans strain F199.

Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing

Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology.

Integrating Ecological and Engineering Concepts of Resilience in Microbial Communities

MetFish: a Metabolomics Pipeline for Studying Microbial Communities in Chemically Extreme Environments

Modeling biofilms with dual extracellular electron transfer mechanisms

Persistence of uranium groundwater plumes: contrasting mechanisms at two DOE sites in the groundwater-river interaction zone

Phototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions

Preparation and evaluation of spore-specific affinity-augmented bio-imprinted beads

Publisher Correction: Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology

Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions

Quantifying community assembly processes and identifying features that impose them

Redox Linked Flavin Sites in Extracellular Decaheme Proteins Involved in Microbe-Mineral Electron Transfer

Redox reactions of reduced flavin mononucleotide (FMN), riboflavin (RBF), and anthraquinone-2,6-disulfonate (AQDS) with ferrihydrite and lepidocrocite

Reduction kinetics of Fe(III), Co(III), U(VI), Cr(VI), and Tc(VII) in cultures of dissimilatory metal-reducing bacteria

Regulation-Structured Dynamic Metabolic Model Provides a Potential Mechanism for Delayed Enzyme Response in Denitrification Process

Related assemblages of sulphate-reducing bacteria associated with ultradeep gold mines of South Africa and deep basalt aquifers of Washington State

Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c-type cytochromes

Shewanella loihica sp. nov., isolated from iron-rich microbial mats in the Pacific Ocean

Shifts in archaeal communities associated with lithological and geochemical variations in subsurface Cretaceous rock

Single-Cell Imaging and Spectroscopic Analyses of Cr(VI) Reduction on the Surface of Bacterial Cells ⬇️

Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer

Spatial and temporal dynamics of the microbial community in the Hanford unconfined aquifer

Stochastic and deterministic assembly processes in subsurface microbial communities

Sustained H 2 Production Driven by Photosynthetic Water Splitting in a Unicellular Cyanobacterium ⬇️

The 'porin-cytochrome' model for microbe-to-mineral electron transfer.

The X-ray crystal structure of Shewanella oneidensis OmcA reveals new insight at the microbe-mineral interface

The role of multihaem cytochromes in the respiration of nitrite in Escherichia coli and Fe(III) in Shewanella oneidensis

Trends and future challenges in sampling the deep terrestrial biosphere

Unlocking the Constraints of Cyanobacterial Productivity: Acclimations Enabling Ultrafast Growth

Utilization of DNA as a sole source of phosphorus, carbon, and energy by Shewanella spp.: ecological and physiological implications for dissimilatory metal reduction

Validation of Shewanella oneidensis MR-1 small proteins by AMT tag-based proteome analysis

Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site