Lista de obras -

A Map of Human Type 1 Diabetes Progression by Imaging Mass Cytometry

scientific article published on 31 January 2019

A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer

artículo científico publicado en 2019

A luminal flavoprotein in endoplasmic reticulum-associated degradation

artículo científico publicado en 2009

A platinum-based covalent viability reagent for single-cell mass cytometry.

artículo científico publicado en 2012

A practical guide to multiplexed mass cytometry

scientific article published on 01 January 2014

A quantitative analysis of the interplay of environment, neighborhood, and cell state in 3D spheroids

artículo científico publicado en 2020

AirLab: a cloud-based platform to manage and share antibody-based single-cell research

artículo científico publicado en 2016

An Immune Atlas of Clear Cell Renal Cell Carcinoma

artículo científico publicado en 2017

An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells

artículo científico publicado en 2007

An integrated, directed mass spectrometric approach for in-depth characterization of complex peptide mixtures

artículo científico publicado en 2008

Analysis of the Human Kinome and Phosphatome by Mass Cytometry Reveals Overexpression-Induced Effects on Cancer-Related Signaling.

artículo científico publicado en 2019

Analysis of the human kinome and phosphatome reveals diseased signaling networks induced by overexpression

Automated identification of stratifying signatures in cellular subpopulations

artículo científico publicado en 2014

Automatic single cell segmentation on highly multiplexed tissue images.

artículo científico publicado en 2015

CellCycleTRACER accounts for cell cycle and volume in mass cytometry data

artículo científico publicado en 2018

Channel crosstalk correction in suspension and imaging mass cytometry

Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis

artículo científico publicado en 2009

Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases

artículo científico publicado en 2009

Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification

scientific article published on February 2009

Compensation of Signal Spillover in Suspension and Imaging Mass Cytometry.

artículo científico publicado en 2018

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics

artículo científico publicado en 2008

Correction to: Limited utility of tissue micro-arrays in detecting intra-tumoral heterogeneity in stem cell characteristics and tumor progression markers in breast cancer.

artículo científico publicado en 2018

Cytomapper: an R/bioconductor package for visualisation of highly multiplexed imaging data

artículo científico publicado en 2020

Dual specificity kinase DYRK3 couples stress granule condensation/dissolution to mTORC1 signaling

scientific journal article

Electron transfer dissociation in conjunction with collision activation to investigate the Drosophila melanogaster phosphoproteome

artículo científico publicado en 2009

Enhanced multiplexing in mass cytometry using osmium and ruthenium tetroxide species.

artículo científico publicado en 2016

Fast chemical imaging at high spatial resolution by laser ablation inductively coupled plasma mass spectrometry.

artículo científico publicado en 2013

Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

artículo científico publicado en 2009

Hair eruption initiates and commensal skin microbiota aggravate adverse events of anti-EGFR therapy

artículo científico publicado en 2019

High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia

artículo científico publicado en 2018

High-Dimensional T Helper Cell Profiling Reveals a Broad Diversity of Stably Committed Effector States and Uncovers Interlineage Relationships

scientific article published on 21 July 2020

Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry

artículo científico publicado en 2014

IL-8 and CXCR1 expression is associated with cancer stem cell-like properties of clear cell renal cancer

scientific article published on 11 April 2019

In-Depth Characterization of Monocyte-Derived Macrophages using a Mass Cytometry-Based Phagocytosis Assay

scientific article published in Scientific Reports

Influence of node abundance on signaling network state and dynamics analyzed by mass cytometry

artículo científico publicado en 2017

Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence

artículo científico publicado en 2007

Kinome-wide decoding of network-attacking mutations rewiring cancer signaling

artículo científico publicado en 2015

Learning time-varying information flow from single-cell epithelial to mesenchymal transition data

artículo científico publicado en 2018

Limited utility of tissue micro-arrays in detecting intra-tumoral heterogeneity in stem cell characteristics and tumor progression markers in breast cancer.

artículo científico publicado en 2018

Mapping of phosphorylation sites by LC-MS/MS

scientific article published on 01 January 2010

Mechanistic Model of Signaling Dynamics Across an Epithelial Mesenchymal Transition

artículo científico publicado en 2020

Modeling Cell-Cell Interactions from Spatial Molecular Data with Spatial Variance Component Analysis

scientific article published on 01 October 2019

Modelling cell-cell interactions from spatial molecular data with spatial variance component analysis

Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare Applications

artículo científico publicado en 2016

Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators

artículo científico publicado en 2012

Orm family proteins mediate sphingolipid homeostasis

artículo científico publicado en 2010

Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm

artículo científico publicado en 2015

PhosphoPep--a database of protein phosphorylation sites in model organisms

artículo científico publicado en 2008

PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells

artículo científico publicado en 2007

Phosphoproteome resource for systems biology research

artículo científico publicado en 2011

Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast

artículo científico publicado en 2010

Phosphorylation of Nup98 by multiple kinases is crucial for NPC disassembly during mitotic entry

artículo científico publicado en 2011

Phosphorylation of residues inside the SNARE complex suppresses secretory vesicle fusion

artículo científico publicado en 2016

Profiling cell signaling networks at single-cell resolution

artículo científico publicado en 2020

Proteomics meets the scientific method.

artículo científico publicado en 2013

Proteomics studies confirm the presence of alternative protein isoforms on a large scale

artículo científico publicado en 2008

Quantitative analysis of protein phosphorylation on a system-wide scale by mass spectrometry-based proteomics

scientific article published on 01 March 2010

Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry

artículo científico publicado en 2005

Regulation of PKD by the MAPK p38delta in insulin secretion and glucose homeostasis

artículo científico publicado en 2009

Reproducible isolation of distinct, overlapping segments of the phosphoproteome

Rewiring of genetic networks in response to DNA damage.

artículo científico publicado en 2010

Ruthenium Counterstaining for Imaging Mass Cytometry

artículo científico publicado en 2018

Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass Cytometry.

artículo científico publicado en 2017

Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass Cytometry.

artículo científico publicado en 2018

Stabilized Reconstruction of Signaling Networks from Single-Cell Cue-Response Data

scientific article published on 27 January 2020

SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling

artículo científico publicado en 2007

Target of Rapamycin Complex 2 Regulates Actin Polarization and Endocytosis via Multiple Pathways

artículo científico publicado en 2015

The Human Cell Atlas

artículo científico publicado en 2017

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

artículo científico publicado en 2018

The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity

artículo científico publicado en 2014

The single-cell pathology landscape of breast cancer

scientific article published on 20 January 2020

T‐cell recovery and evidence of persistent immune activation 12 months after severe <scp>COVID</scp>‐19

artículo científico publicado en 2022

Uncovering axes of variation among single-cell cancer specimens

scientific article published on 13 January 2020

Unraveling cell populations in tumors by single-cell mass cytometry

artículo científico publicado en 2014

Yeast endosulfines control entry into quiescence and chronological life span by inhibiting protein phosphatase 2A

scientific journal article

histoCAT: analysis of cell phenotypes and interactions in multiplex image cytometry data.

artículo científico

Lista de obras de

A Map of Human Type 1 Diabetes Progression by Imaging Mass Cytometry

A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer

A luminal flavoprotein in endoplasmic reticulum-associated degradation

A platinum-based covalent viability reagent for single-cell mass cytometry.

A practical guide to multiplexed mass cytometry

A quantitative analysis of the interplay of environment, neighborhood, and cell state in 3D spheroids

AirLab: a cloud-based platform to manage and share antibody-based single-cell research

An Immune Atlas of Clear Cell Renal Cell Carcinoma

An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells

An integrated, directed mass spectrometric approach for in-depth characterization of complex peptide mixtures

Analysis of the Human Kinome and Phosphatome by Mass Cytometry Reveals Overexpression-Induced Effects on Cancer-Related Signaling.

Analysis of the human kinome and phosphatome reveals diseased signaling networks induced by overexpression

Automated identification of stratifying signatures in cellular subpopulations

Automatic single cell segmentation on highly multiplexed tissue images.

CellCycleTRACER accounts for cell cycle and volume in mass cytometry data

Channel crosstalk correction in suspension and imaging mass cytometry

Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis

Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases

Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification

Compensation of Signal Spillover in Suspension and Imaging Mass Cytometry.

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics

Correction to: Limited utility of tissue micro-arrays in detecting intra-tumoral heterogeneity in stem cell characteristics and tumor progression markers in breast cancer.

Cytomapper: an R/bioconductor package for visualisation of highly multiplexed imaging data

Dual specificity kinase DYRK3 couples stress granule condensation/dissolution to mTORC1 signaling

Electron transfer dissociation in conjunction with collision activation to investigate the Drosophila melanogaster phosphoproteome

Enhanced multiplexing in mass cytometry using osmium and ruthenium tetroxide species.

Fast chemical imaging at high spatial resolution by laser ablation inductively coupled plasma mass spectrometry.

Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

Hair eruption initiates and commensal skin microbiota aggravate adverse events of anti-EGFR therapy

High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia

High-Dimensional T Helper Cell Profiling Reveals a Broad Diversity of Stably Committed Effector States and Uncovers Interlineage Relationships

Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry

IL-8 and CXCR1 expression is associated with cancer stem cell-like properties of clear cell renal cancer

In-Depth Characterization of Monocyte-Derived Macrophages using a Mass Cytometry-Based Phagocytosis Assay

Influence of node abundance on signaling network state and dynamics analyzed by mass cytometry

Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence

Kinome-wide decoding of network-attacking mutations rewiring cancer signaling

Learning time-varying information flow from single-cell epithelial to mesenchymal transition data

Limited utility of tissue micro-arrays in detecting intra-tumoral heterogeneity in stem cell characteristics and tumor progression markers in breast cancer.

Mapping of phosphorylation sites by LC-MS/MS

Mechanistic Model of Signaling Dynamics Across an Epithelial Mesenchymal Transition

Modeling Cell-Cell Interactions from Spatial Molecular Data with Spatial Variance Component Analysis

Modelling cell-cell interactions from spatial molecular data with spatial variance component analysis

Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare Applications

Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators

Orm family proteins mediate sphingolipid homeostasis

Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm

PhosphoPep--a database of protein phosphorylation sites in model organisms

PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells

Phosphoproteome resource for systems biology research

Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast

Phosphorylation of Nup98 by multiple kinases is crucial for NPC disassembly during mitotic entry

Phosphorylation of residues inside the SNARE complex suppresses secretory vesicle fusion

Profiling cell signaling networks at single-cell resolution

Proteomics meets the scientific method.

Proteomics studies confirm the presence of alternative protein isoforms on a large scale

Quantitative analysis of protein phosphorylation on a system-wide scale by mass spectrometry-based proteomics

Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry

Regulation of PKD by the MAPK p38delta in insulin secretion and glucose homeostasis

Reproducible isolation of distinct, overlapping segments of the phosphoproteome

Rewiring of genetic networks in response to DNA damage.

Ruthenium Counterstaining for Imaging Mass Cytometry

Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass Cytometry.

Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass Cytometry.

Stabilized Reconstruction of Signaling Networks from Single-Cell Cue-Response Data

SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling

Target of Rapamycin Complex 2 Regulates Actin Polarization and Endocytosis via Multiple Pathways

The Human Cell Atlas

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity

The single-cell pathology landscape of breast cancer

T‐cell recovery and evidence of persistent immune activation 12 months after severe <scp>COVID</scp>‐19

Uncovering axes of variation among single-cell cancer specimens

Unraveling cell populations in tumors by single-cell mass cytometry

Yeast endosulfines control entry into quiescence and chronological life span by inhibiting protein phosphatase 2A

histoCAT: analysis of cell phenotypes and interactions in multiplex image cytometry data.