Lista de obras -

A cross-species transcriptomics approach to identify genes involved in leaf development

artículo científico publicado en 2008

A geographically matched control population efficiently limits the number of candidate disease-causing variants in an unbiased whole-genome analysis

scientific article published on 27 March 2019

A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees.

artículo científico publicado en 2018

A statistical resampling method to calculate biomagnification factors exemplified with organochlorine data from herring (Clupea harengus) muscle and guillemot (Uria aalge) egg from the Baltic sea.

artículo científico publicado en 2005

A whole-genome sequenced control population in northern Sweden reveals subregional genetic differences

scientific article published on 11 September 2020

ADC texture--an imaging biomarker for high-grade glioma?

artículo científico publicado en 2014

Altered metabolic signature in pre-diabetic NOD mice.

artículo científico publicado en 2012

Building Multivariate Systems Biology Models ⬇️

artículo científico publicado el 2 de agosto de 2012

CV-ANOVA for significance testing of PLS and OPLS® models

artículo científico publicado en 2008

Cell-specific chemotyping and multivariate imaging by combined FT-IR microspectroscopy and orthogonal projections to latent structures (OPLS) analysis reveals the chemical landscape of secondary xylem

artículo científico publicado en 2011

Changes in diurnal patterns within the Populus transcriptome and metabolome in response to photoperiod variation

artículo científico publicado en 2010

Chemometrics in metabolomics--a review in human disease diagnosis

artículo científico publicado en 2009

Chemometrics in metabonomics.

artículo científico publicado en 2007

Complete Genome Sequence of Francisella guangzhouensis Strain 08HL01032T, Isolated from Air-Conditioning Systems in China

artículo científico publicado en 2015

Cytokine Profiles in Autoantibody Defined Subgroups of Systemic Lupus Erythematosus

scientific article published on 18 February 2019

Data integration in plant biology: the O2PLS method for combined modeling of transcript and metabolite data

artículo científico publicado en 2007

Data mining and visualisation: general discussion

artículo científico publicado en 2019

Design of experiments on 135 cloned poplar trees to map environmental influence in greenhouse ⬇️

artículo científico publicado el 19 de noviembre de 2010

Diagnostic properties of metabolic perturbations in rheumatoid arthritis

artículo científico publicado en 2011

Dynamic ultrasound imaging—A multivariate approach for the analysis and comparison of time-dependent musculoskeletal movements ⬇️

artículo científico publicado el 27 de septiembre de 2012

EGFR gene variants are associated with specific somatic aberrations in glioma

artículo científico publicado en 2012

Environmental and hormonal regulation of the activity-dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks

artículo científico publicado en 2007

Evaluation of a protocol for metabolic profiling studies on human blood plasma by combined ultra-performance liquid chromatography/mass spectrometry: From extraction to data analysis

artículo científico publicado en 2007

Evaluation of the orthogonal projection on latent structure model limitations caused by chemical shift variability and improved visualization of biomarker changes in 1H NMR spectroscopic metabonomic studies.

artículo científico publicado en 2005

Extraction and GC/MS analysis of the human blood plasma metabolome

artículo científico publicado en 2005

Extraction, interpretation and validation of information for comparing samples in metabolic LC/MS data sets

artículo científico publicado en 2005

From Data Processing to Multivariate Validation - Essential Steps in Extracting Interpretable Information from Metabolomics Data ⬇️

artículo científico publicado el 1 de julio de 2011

Generalized Subset Designs in Analytical Chemistry.

artículo científico publicado en 2017

Global expression profiling in leaves of free-growing aspen

artículo científico publicado en 2008

Global, local and unique decompositions in OnPLS for multiblock data analysis

artículo científico publicado en 2013

Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance

artículo científico publicado en 2016

High-throughput data analysis for detecting and identifying differences between samples in GC/MS-based metabolomic analyses

artículo científico publicado en 2005

Integrated analysis of transcript, protein and metabolite data to study lignin biosynthesis in hybrid aspen

artículo científico publicado en 2009

Joint and Unique Multiblock Analysis for Integration and Calibration Transfer of NIR Instruments

scientific article published on 21 February 2019

Joint and unique multiblock analysis of biological data - multiomics malaria study

artículo científico publicado en 2019

K-OPLS package: kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space

artículo científico publicado en 2008

Kernel-based orthogonal projections to latent structures (K-OPLS)

scholarly article by Mattias Rantalainen et al published 2007 in Journal of Chemometrics

LAMINA: a tool for rapid quantification of leaf size and shape parameters

artículo científico publicado en 2008

LIVECell-A large-scale dataset for label-free live cell segmentation

artículo científico publicado en 2021

MASQOT-GUI: spot quality assessment for the two-channel microarray platform

artículo científico publicado en 2006

MASQOT: a method for cDNA microarray spot quality control

artículo científico publicado en 2005

Metabolic Profiling of Multiorgan Samples: Evaluation of MODY5/RCAD Mutant Mice

artículo científico publicado en 2018

Metabolic Profiling of Systemic Lupus Erythematosus and Comparison with Primary Sjögren's Syndrome and Systemic Sclerosis

artículo científico publicado en 2016

Metabolic profiling of zebrafish embryo development from blastula period to early larval stages.

artículo científico publicado en 2019

Metabolic responses to change in disease activity during tumor necrosis factor inhibition in patients with rheumatoid arthritis

artículo científico publicado en 2012

Metabolite Signature during Short-Day Induced Growth Cessation in Populus

artículo científico publicado en 2011

Metabolite and Lipid Profiling of Biobank Plasma Samples Collected Prior to Onset of Rheumatoid Arthritis

artículo científico publicado en 2016

Metabolomics study of fatigue in patients with rheumatoid arthritis naïve to biological treatment

artículo científico publicado en 2016

Modelling human musculoskeletal functional movements using ultrasound imaging

artículo científico publicado en 2010

Multi-Organ Contribution to the Metabolic Plasma Profile Using Hierarchical Modelling

artículo científico publicado en 2015

O2-PLS, a two-block (X-Y) latent variable regression (LVR) method with an integral OSC filter

artículo científico publicado en 2003

OPLS discriminant analysis: combining the strengths of PLS-DA and SIMCA classification

article

OPLS in batch monitoring - Opens up new opportunities

artículo científico publicado en 2014

OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants

artículo científico publicado en 2013

OnPLS-Based Multi-Block Data Integration: A Multivariate Approach to Interrogating Biological Interactions in Asthma

artículo científico publicado en 2018

Orthogonal PLS (OPLS) Modeling for Improved Analysis and Interpretation in Drug Design

artículo científico publicado en 2012

Orthogonal projections to latent structures (O-PLS)

scholarly article by Johan Trygg & Svante Wold published 2002 in Journal of Chemometrics

Orthogonal projections to latent structures as a strategy for microarray data normalization

artículo científico publicado en 2007

Orthogonal projections to latent structures discriminant analysis modeling on in situ FT-IR spectral imaging of liver tissue for identifying sources of variability

artículo científico publicado en 2008

Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees

artículo científico publicado en 2021

Piecewise multivariate modelling of sequential metabolic profiling data

artículo científico publicado en 2008

Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data--a potential tool for multi-parametric diagnosis

artículo científico publicado en 2006

Proposed minimum reporting standards for data analysis in metabolomics

article

Protein expression in tension wood formation monitored at high tissue resolution in Populus.

artículo científico publicado en 2017

Quantification of run order effect on chromatography - mass spectrometry profiling data

artículo científico publicado en 2018

Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development

artículo científico publicado en 2016

Statistical total correlation spectroscopy: an exploratory approach for latent biomarker identification from metabolic 1H NMR data sets

artículo científico publicado en 2005

Statistically integrated metabonomic-proteomic studies on a human prostate cancer xenograft model in mice

artículo científico publicado en 2006

Strategy for Minimizing Between-Study Variation of Large-Scale Phenotypic Experiments Using Multivariate Analysis ⬇️

artículo científico publicado el 16 de octubre de 2012

Strategy for optimizing LC-MS data processing in metabolomics: a design of experiments approach.

artículo científico publicado en 2012

The effects of thawing on the plasma metabolome: evaluating differences between thawed plasma and multi-organ samples.

artículo científico publicado en 2017

Unlocking interpretation in near infrared multivariate calibrations by orthogonal partial least squares

artículo científico publicado en 2009

Using chemometrics for navigating in the large data sets of genomics, proteomics, and metabonomics (gpm).

artículo científico publicado en 2004

Visualization of GC/TOF-MS-based metabolomics data for identification of biochemically interesting compounds using OPLS class models

artículo científico publicado en 2007

Visualization of descriptive multiblock analysis

artículo científico publicado en 2018

doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows

artículo científico publicado en 2019

Lista de obras de

A cross-species transcriptomics approach to identify genes involved in leaf development

A geographically matched control population efficiently limits the number of candidate disease-causing variants in an unbiased whole-genome analysis

A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees.

A statistical resampling method to calculate biomagnification factors exemplified with organochlorine data from herring (Clupea harengus) muscle and guillemot (Uria aalge) egg from the Baltic sea.

A whole-genome sequenced control population in northern Sweden reveals subregional genetic differences

ADC texture--an imaging biomarker for high-grade glioma?

Altered metabolic signature in pre-diabetic NOD mice.

Building Multivariate Systems Biology Models ⬇️

CV-ANOVA for significance testing of PLS and OPLS® models

Cell-specific chemotyping and multivariate imaging by combined FT-IR microspectroscopy and orthogonal projections to latent structures (OPLS) analysis reveals the chemical landscape of secondary xylem

Changes in diurnal patterns within the Populus transcriptome and metabolome in response to photoperiod variation

Chemometrics in metabolomics--a review in human disease diagnosis

Chemometrics in metabonomics.

Complete Genome Sequence of Francisella guangzhouensis Strain 08HL01032T, Isolated from Air-Conditioning Systems in China

Cytokine Profiles in Autoantibody Defined Subgroups of Systemic Lupus Erythematosus

Data integration in plant biology: the O2PLS method for combined modeling of transcript and metabolite data

Data mining and visualisation: general discussion

Design of experiments on 135 cloned poplar trees to map environmental influence in greenhouse ⬇️

Diagnostic properties of metabolic perturbations in rheumatoid arthritis

Dynamic ultrasound imaging—A multivariate approach for the analysis and comparison of time-dependent musculoskeletal movements ⬇️

EGFR gene variants are associated with specific somatic aberrations in glioma

Environmental and hormonal regulation of the activity-dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks

Evaluation of a protocol for metabolic profiling studies on human blood plasma by combined ultra-performance liquid chromatography/mass spectrometry: From extraction to data analysis

Evaluation of the orthogonal projection on latent structure model limitations caused by chemical shift variability and improved visualization of biomarker changes in 1H NMR spectroscopic metabonomic studies.

Extraction and GC/MS analysis of the human blood plasma metabolome

Extraction, interpretation and validation of information for comparing samples in metabolic LC/MS data sets

From Data Processing to Multivariate Validation - Essential Steps in Extracting Interpretable Information from Metabolomics Data ⬇️

Generalized Subset Designs in Analytical Chemistry.

Global expression profiling in leaves of free-growing aspen

Global, local and unique decompositions in OnPLS for multiblock data analysis

Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance

High-throughput data analysis for detecting and identifying differences between samples in GC/MS-based metabolomic analyses

Integrated analysis of transcript, protein and metabolite data to study lignin biosynthesis in hybrid aspen

Joint and Unique Multiblock Analysis for Integration and Calibration Transfer of NIR Instruments

Joint and unique multiblock analysis of biological data - multiomics malaria study

K-OPLS package: kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space

Kernel-based orthogonal projections to latent structures (K-OPLS)

LAMINA: a tool for rapid quantification of leaf size and shape parameters

LIVECell-A large-scale dataset for label-free live cell segmentation

MASQOT-GUI: spot quality assessment for the two-channel microarray platform

MASQOT: a method for cDNA microarray spot quality control

Metabolic Profiling of Multiorgan Samples: Evaluation of MODY5/RCAD Mutant Mice

Metabolic Profiling of Systemic Lupus Erythematosus and Comparison with Primary Sjögren's Syndrome and Systemic Sclerosis

Metabolic profiling of zebrafish embryo development from blastula period to early larval stages.

Metabolic responses to change in disease activity during tumor necrosis factor inhibition in patients with rheumatoid arthritis

Metabolite Signature during Short-Day Induced Growth Cessation in Populus

Metabolite and Lipid Profiling of Biobank Plasma Samples Collected Prior to Onset of Rheumatoid Arthritis

Metabolomics study of fatigue in patients with rheumatoid arthritis naïve to biological treatment

Modelling human musculoskeletal functional movements using ultrasound imaging

Multi-Organ Contribution to the Metabolic Plasma Profile Using Hierarchical Modelling

O2-PLS, a two-block (X-Y) latent variable regression (LVR) method with an integral OSC filter

OPLS discriminant analysis: combining the strengths of PLS-DA and SIMCA classification

OPLS in batch monitoring - Opens up new opportunities

OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants

OnPLS-Based Multi-Block Data Integration: A Multivariate Approach to Interrogating Biological Interactions in Asthma

Orthogonal PLS (OPLS) Modeling for Improved Analysis and Interpretation in Drug Design

Orthogonal projections to latent structures (O-PLS)

Orthogonal projections to latent structures as a strategy for microarray data normalization

Orthogonal projections to latent structures discriminant analysis modeling on in situ FT-IR spectral imaging of liver tissue for identifying sources of variability

Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees

Piecewise multivariate modelling of sequential metabolic profiling data

Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data--a potential tool for multi-parametric diagnosis

Proposed minimum reporting standards for data analysis in metabolomics

Protein expression in tension wood formation monitored at high tissue resolution in Populus.

Quantification of run order effect on chromatography - mass spectrometry profiling data

Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development

Statistical total correlation spectroscopy: an exploratory approach for latent biomarker identification from metabolic 1H NMR data sets

Statistically integrated metabonomic-proteomic studies on a human prostate cancer xenograft model in mice

Strategy for Minimizing Between-Study Variation of Large-Scale Phenotypic Experiments Using Multivariate Analysis ⬇️

Strategy for optimizing LC-MS data processing in metabolomics: a design of experiments approach.

The effects of thawing on the plasma metabolome: evaluating differences between thawed plasma and multi-organ samples.

Unlocking interpretation in near infrared multivariate calibrations by orthogonal partial least squares

Using chemometrics for navigating in the large data sets of genomics, proteomics, and metabonomics (gpm).

Visualization of GC/TOF-MS-based metabolomics data for identification of biochemically interesting compounds using OPLS class models

Visualization of descriptive multiblock analysis

doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows