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A Blind and Independent Benchmark Study for Detecting Differentially Methylated Regions in Plants

artículo científico publicado en 2020

A Blind and Independent Benchmark Study for Detecting Differentially Methylated Regions in Plants

artículo científico publicado en 2020

A Single-Target Mitochondrial RNA Editing Factor of Funaria hygrometrica Can Fully Reconstitute RNA Editing at Two Sites in Physcomitrella patens.

artículo científico publicado en 2017

A sequence-anchored genetic linkage map for the moss, Physcomitrella patens

artículo científico publicado en 2008

ABA-Induced Vegetative Diaspore Formation in

artículo científico publicado en 2019

Aethionema arabicum: a novel model plant to study the light control of seed germination

artículo científico publicado en 2019

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs

artículo científico publicado en 2012

An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens

artículo científico publicado en 2007

Analysis of the Localization of Fluorescent PpROP1 and PpROP-GEF4 Fusion Proteins in Moss Protonemata Based on Genomic "Knock-In" and Estradiol-Titratable Expression

artículo científico publicado en 2019

Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts

artículo científico publicado en 2020

Are fungi-derived genomic regions related to antagonism toward fungi in mosses?

artículo científico publicado en 2020

Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica

artículo científico publicado en 2011

Characterization of Phytochrome Interacting Factors from the Moss Physcomitrella patens Illustrates Conservation of Phytochrome Signaling Modules in Land Plants.

artículo científico publicado en 2017

Characterization of evolutionarily conserved key players affecting eukaryotic flagellar motility and fertility using a moss model

scientific article published on 17 February 2020

Characterization of spa mutants in the moss Physcomitrella provides evidence for functional divergence of SPA genes during the evolution of land plants

scientific article published on 20 July 2019

Combination of the Endogenous lhcsr1 Promoter and Codon Usage Optimization Boosts Protein Expression in the Moss Physcomitrella patens

artículo científico publicado en 2017

Comprehensive Genome-Wide Classification Reveals That Many Plant-Specific Transcription Factors Evolved in Streptophyte Algae ⬇️

artículo científico publicado en 2017

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

artículo científico publicado en 2012

DEK1 displays a strong subcellular polarity during Physcomitrella patens 3D growth

scientific article published on 08 January 2020

Dating the early evolution of plants: detection and molecular clock analyses of orthologs.

artículo científico publicado en 2007

De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome

artículo científico publicado en 2014

Detection of somatic epigenetic variation in Norway spruce via targeted bisulfite sequencing

artículo científico publicado en 2018

Developmental Control and Plasticity of Fruit and Seed Dimorphism in Aethionema arabicum

artículo científico publicado en 2016

Diversification of ftsZ during early land plant evolution

artículo científico publicado en 2004

Dual targeting of plastid division protein FtsZ to chloroplasts and the cytoplasm

artículo científico publicado en 2004

EST Sequencing from Embryogenic Cyclamen persicum Cell Cultures Identifies a High Proportion of Transcripts Homologous to Plant Genes Involved in Somatic Embryogenesis

Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

artículo científico publicado en 2017

EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics

artículo científico publicado en 2021

Erratum to: An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens

artículo científico publicado en 2016

Evolution of the Symbiosis-Specific GRAS Regulatory Network in Bryophytes

article published in 2018

Exploring plant biodiversity: the Physcomitrella genome and beyond.

artículo científico publicado en 2008

Fern genomes elucidate land plant evolution and cyanobacterial symbioses

article

Functional analysis of COP1 and SPA orthologs from Physcomitrella and rice during photomorphogenesis of transgenic Arabidopsis reveals distinct evolutionary conservation.

artículo científico publicado en 2014

Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote

artículo científico publicado en 2013

Gene gains paved the path to land

scientific article published on 01 January 2020

Generation-biased gene expression in a bryophyte model system

artículo científico publicado en 2010

Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance. ⬇️

artículo científico publicado en 2016

Genome Improvement and Genetic Map Construction for Aethionema arabicum, the First Divergent Branch in the Brassicaceae Family

artículo científico publicado en 2019

Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

artículo científico publicado en 2013

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

artículo científico publicado en 2013

Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity

artículo científico publicado en 2010

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri

artículo científico publicado en 2010

Green targeting predictor and ambiguous targeting predictor 2: the pitfalls of plant protein targeting prediction and of transient protein expression in heterologous systems

artículo científico publicado en 2013

HAG1 and SWI3A/B control of male germ line development in P. patens suggests conservation of epigenetic reproductive control across land plants

artículo científico publicado en 2021

High frequency of phenotypic deviations in Physcomitrella patens plants transformed with a gene-disruption library

artículo científico publicado en 2002

Identification and characterization of NAGNAG alternative splicing in the moss Physcomitrella patens

artículo científico publicado en 2010

Identification of genic moss SSR markers and a comparative analysis of twenty-four algal and plant gene indices reveal species-specific rather than group-specific characteristics of microsatellites

artículo científico publicado en 2006

Insights into the Evolution of Multicellularity from the Sea Lettuce Genome

scientific article published on 13 September 2018

Iron-Sulfur Cluster Biosynthesis in Algae with Complex Plastids

article published in 2018

Large impact of the apoplast on somatic embryogenesis in Cyclamen persicum offers possibilities for improved developmental control in vitro

artículo científico publicado en 2010

Large-scale gene expression profiling data for the model moss Physcomitrella patens aid understanding of developmental progression, culture and stress conditions

2014 scientific article

Localization and Evolution of Putative Triose Phosphate Translocators in the Diatom Phaeodactylum tricornutum

artículo científico publicado en 2015

Massive Protein Import into the Early-Evolutionary-Stage Photosynthetic Organelle of the Amoeba Paulinella chromatophora.

artículo científico publicado en 2017

Means to optimize protein expression in transgenic plants

artículo científico publicado en 2014

Microarray analysis of the moss Physcomitrella patens reveals evolutionarily conserved transcriptional regulation of salt stress and abscisic acid signalling

artículo científico publicado en 2009

Molecular evidence for convergent evolution and allopolyploid speciation within the Physcomitrium-Physcomitrella species complex

artículo científico publicado en 2014

Moss transcriptome and beyond

artículo científico publicado en 2002

Multi-omics reveals mechanisms of total resistance to extreme illumination of a desert alga

artículo científico publicado en 2020

Network theory inspired analysis of time-resolved expression data reveals key players guiding P. patens stem cell development

artículo científico publicado en 2013

Ontologies as integrative tools for plant science

artículo científico publicado en 2012

PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens

artículo científico publicado en 2019

Phylogenomic analysis of gene co-expression networks reveals the evolution of functional modules.

artículo científico publicado en 2017

Physcomitrella patens Reute mCherry as a tool for efficient crossing within and between ecotypes

scientific article published on 30 May 2018

PlanTAPDB, a phylogeny-based resource of plant transcription-associated proteins

article

PlnTFDB: updated content and new features of the plant transcription factor database

artículo científico publicado en 2009

Prediction and Validation of Promoters Involved in the Abscisic Acid Response in Physcomitrella patens ⬇️

artículo científico publicado el 11 de marzo de 2011

Prediction of dual protein targeting to plant organelles.

artículo científico publicado en 2009

Protein encoding genes in an ancient plant: analysis of codon usage, retained genes and splice sites in a moss, Physcomitrella patens

artículo científico publicado en 2005

RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal

artículo científico publicado en 2009

Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

artículo científico publicado en 2013

Reconstructing trait evolution in plant evo-devo studies

artículo científico publicado en 2019

Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution

artículo científico publicado en 2009

Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds

artículo científico publicado en 2020

Selfing in haploid plants and efficacy of selection: codon usage bias in the model moss Physcomitrella patens

artículo científico publicado en 2017

Sexual reproduction, sporophyte development and molecular variation in the model moss Physcomitrella patens: introducing the ecotype Reute.

artículo científico publicado en 2017

Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing

scientific article published on 07 July 2020

The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization

article

The DEK1 Calpain Linker Functions in Three-Dimensional Body Patterning in Physcomitrella patens.

artículo científico publicado en 2016

The Ectocarpus Genome and Brown Algal Genomics

article published in 2012

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

artículo científico publicado en 2010

The P. patens chromosome-scale assembly reveals moss genome structure and evolution. ⬇️

artículo científico publicado en 2017

The Physcomitrella patens gene atlas project: large scale RNA-seq based expression data.

artículo científico publicado en 2018

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

artículo científico publicado en 2011

The biotrophic development of Ustilago maydis studied by RNAseq analysis

artículo científico publicado en 2018

The chromatin landscape of the moss Physcomitrella patens and its dynamics during development and drought stress.

artículo científico publicado en 2014

The evolution of eukaryotic cells from the perspective of peroxisomes: phylogenetic analyses of peroxisomal beta-oxidation enzymes support mitochondria-first models of eukaryotic cell evolution

artículo científico publicado en 2014

The evolution of nuclear auxin signalling

artículo científico publicado en 2009

The mechanism of gene targeting in Physcomitrella patens: homologous recombination, concatenation and multiple integration

artículo científico publicado en 2006

The molecular and physiological responses of Physcomitrella patens to ultraviolet-B radiation

artículo científico publicado en 2010

The plant ontology as a tool for comparative plant anatomy and genomic analyses

artículo científico publicado en 2012

The speciation history of the Physcomitrium--Physcomitrella species complex.

artículo científico publicado en 2009

Usability of reference-free transcriptome assemblies for detection of differential expression: a case study on Aethionema arabicum dimorphic seeds

artículo científico publicado en 2019

WOX13-like genes are required for reprogramming of leaf and protoplast cells into stem cells in the moss Physcomitrella patens.

artículo científico publicado en 2014

ppdb: plant promoter database version 3.0.

artículo científico publicado en 2013

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