Lista de obras -

A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens

artículo científico publicado en 2017

A Fungal World: Could the Gut Mycobiome Be Involved in Neurological Disease?

scientific article published in 2018

A MiSeq-HyDRA platform for enhanced HIV drug resistance genotyping and surveillance.

artículo científico publicado en 2019

A Primer on Infectious Disease Bacterial Genomics

artículo científico publicado en 2016

A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT) as a Phylogenetic Marker

artículo científico publicado en 2016

A comparative study of the gut microbiota in immune-mediated inflammatory diseases-does a common dysbiosis exist?

artículo científico publicado en 2018

A comparison of parallel pyrosequencing and sanger clone-based sequencing and its impact on the characterization of the genetic diversity of HIV-1.

artículo científico publicado en 2011

A monoclonal antibody targeting a highly conserved epitope in influenza B neuraminidase provides protection against drug resistant strains.

artículo científico publicado en 2013

A randomized trial to determine the impact of a digestion resistant starch composition on the gut microbiome in older and mid-age adults

artículo científico publicado en 2017

A simple slot blot for the detection of virtually all subtypes of the influenza A viral hemagglutinins using universal antibodies targeting the fusion peptide

artículo científico publicado en 2010

A universal monoclonal antibody protects against all influenza A and B viruses by targeting a highly conserved epitope in the viral neuraminidase

Application of whole genome sequence analysis to the study of Mycobacterium tuberculosis in Nunavut, Canada

artículo científico publicado en 2017

Aurintricarboxylic acid is a potent inhibitor of influenza A and B virus neuraminidases

artículo científico publicado en 2009

BacMap: an interactive picture atlas of annotated bacterial genomes

artículo científico publicado en 2005

BacMap: an up-to-date electronic atlas of annotated bacterial genomes

artículo científico publicado en 2012

Comparative Genomics Reveal That Host-Innate Immune Responses Influence the Clinical Prevalence of Legionella pneumophila Serogroups.

artículo científico publicado en 2013

Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa ⬇️

artículo científico publicado el 1 de noviembre de 2011

Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis

artículo científico publicado en 2016

Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance

artículo científico

Correction: Aurintricarboxylic Acid Is a Potent Inhibitor of Influenza A and B Virus Neuraminidases.

artículo científico publicado en 2013

Development and applications of universal H7 subtype-specific antibodies for the analysis of influenza H7N9 vaccines

artículo científico publicado en 2015

Draft Genome Sequences of Burkholderia contaminans FFI-28, a Strain Isolated from a Contaminated Pharmaceutical Solution.

artículo científico publicado en 2016

Ebola sGP--the first viral glycoprotein shown to be C-mannosylated

artículo científico publicado en 2007

Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti

artículo científico publicado en 2013

First Complete Genome Sequence of Haemophilus influenzae Serotype a.

artículo científico publicado en 2017

Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access

artículo científico publicado en 2017

GOmotif: A web server for investigating the biological role of protein sequence motifs

artículo científico publicado en 2011

Genomic Epidemiology and Molecular Resistance Mechanisms of Azithromycin-Resistant Neisseria gonorrhoeae in Canada from 1997 to 2014

artículo científico publicado en 2016

High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak

artículo científico publicado en 2010

Identification of HLA-G*01:17, a new allele possibly generated by an interloci gene conversion event involving exon 3 of HLA-B ⬇️

artículo científico publicado el 13 de diciembre de 2010

Identification of immunodominant CD8 epitope in the stalk domain of influenza B viral hemagglutinin

artículo científico publicado en 2018

Impact of sequencing depth on the characterization of the microbiome and resistome. ⬇️

artículo científico publicado en 2018

Interactive microbial genome visualization with GView ⬇️

artículo científico publicado el 17 de octubre de 2010

Livestock-associated methicillin-resistant Staphylococcus aureus sequence type 398 in humans, Canada

artículo científico publicado en 2010

Low abundance drug resistance variants in transmitted HIV drug resistance surveillance specimens identified using tagged pooled pyrosequencing ⬇️

artículo científico publicado el 14 de noviembre de 2012

MS-H: A Novel Proteomic Approach to Isolate and Type the E. coli H Antigen Using Membrane Filtration and Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) ⬇️

artículo científico publicado el 21 de febrero de 2013

Microbiome Survey of the Inflamed and Noninflamed Gut at Different Compartments Within the Gastrointestinal Tract of Inflammatory Bowel Disease Patients

artículo científico publicado en 2016

Microbiome profiling of drinking water in relation to incidence of inflammatory bowel disease

artículo científico publicado en 2016

Molecular typing of a Legionella pneumophila outbreak in Ontario, Canada

artículo científico publicado en 2007

Nationwide molecular surveillance of pandemic H1N1 influenza A virus genomes: Canada, 2009.

artículo científico publicado en 2011

Next generation sequencing of the hepatitis C virus NS5B gene reveals potential novel S282 drug resistance mutations

artículo científico publicado en 2015

Phylogenetic analysis of emergent Streptococcus pneumoniae serotype 22F causing invasive pneumococcal disease using whole genome sequencing

artículo científico publicado en 2017

Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation

artículo científico publicado en 2013

Pyrosequencing dried blood spots reveals differences in HIV drug resistance between treatment naïve and experienced patients

artículo científico publicado en 2013

Quantitative Analyses of all Influenza Type A Viral Hemagglutinins and Neuraminidases using Universal Antibodies in Simple Slot Blot Assays ⬇️

artículo científico publicado el 4 de abril de 2011

Sequence database versioning for command line and Galaxy bioinformatics servers

artículo científico publicado en 2015

Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria

scholarly article by Aleisha Reimer et al published January 2019 in Microbial genomics

Sylvatic plague in a Canadian black-tailed prairie dog (Cynomys ludovicianus).

artículo científico publicado en 2014

Systematic analysis of host immunological pressure on the envelope gene of human immunodeficiency virus type 1 by an immunobioinformatics approach

artículo científico publicado en 2008

Tatumella saanichensis sp. nov., isolated from a cystic fibrosis patient

artículo científico publicado en 2015

The Gut Microbiota in Immune-Mediated Inflammatory Diseases

artículo científico publicado en 2016

The Integrated Rapid Infectious Disease Analysis (IRIDA) Platform

scholarly article published 31 July 2018

The SR-rich motif in SARS-CoV nucleocapsid protein is important for virus replication.

artículo científico publicado en 2009

The interaction between thymine DNA glycosylase and nuclear receptor coactivator 3 is required for the transcriptional activation of nuclear hormone receptors.

artículo científico publicado en 2009

The universal epitope of influenza A viral neuraminidase fundamentally contributes to enzyme activity and viral replication

artículo científico publicado en 2013

Universal anti-neuraminidase antibody inhibiting all influenza A subtypes

artículo científico publicado en 2013

Universal antibodies against the highly conserved influenza fusion peptide cross-neutralize several subtypes of influenza A virus

artículo científico publicado en 2010

Universal antibodies and their applications to the quantitative determination of virtually all subtypes of the influenza A viral hemagglutinins

artículo científico publicado en 2008

Universal type/subtype-specific antibodies for quantitative analyses of neuraminidase in trivalent influenza vaccines

artículo científico publicado en 2018

Unveiling Integrated Functional Pathways Leading to Enhanced Respiratory Disease Associated With Inactivated Respiratory Syncytial Viral Vaccine

Visualizing and comparing circular genomes using the CGView family of tools.

artículo científico publicado en 2017

Whole genome sequencing and phylogenetic analysis of strains of the agent of Lyme disease Borrelia burgdorferi from Canadian emergence zones

artículo científico publicado en 2018

Whole genome typing of the recently emerged Canadian serogroup W Neisseria meningitidis Sequence Type-11 clonal complex isolates associated with invasive meningococcal disease

artículo científico publicado en 2018

Whole-genome phylogenomic heterogeneity of Neisseria gonorrhoeae isolates with decreased cephalosporin susceptibility collected in Canada between 1989 and 2013.

artículo científico publicado en 2014

whole-genome sequence of livestock-associated st398 methicillin-resistant staphylococcus aureus Isolated from Humans in Canada

artículo científico publicado en 2012

Lista de obras de

A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens

A Fungal World: Could the Gut Mycobiome Be Involved in Neurological Disease?

A MiSeq-HyDRA platform for enhanced HIV drug resistance genotyping and surveillance.

A Primer on Infectious Disease Bacterial Genomics

A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT) as a Phylogenetic Marker

A comparative study of the gut microbiota in immune-mediated inflammatory diseases-does a common dysbiosis exist?

A comparison of parallel pyrosequencing and sanger clone-based sequencing and its impact on the characterization of the genetic diversity of HIV-1.

A monoclonal antibody targeting a highly conserved epitope in influenza B neuraminidase provides protection against drug resistant strains.

A randomized trial to determine the impact of a digestion resistant starch composition on the gut microbiome in older and mid-age adults

A simple slot blot for the detection of virtually all subtypes of the influenza A viral hemagglutinins using universal antibodies targeting the fusion peptide

A universal monoclonal antibody protects against all influenza A and B viruses by targeting a highly conserved epitope in the viral neuraminidase

Application of whole genome sequence analysis to the study of Mycobacterium tuberculosis in Nunavut, Canada

Aurintricarboxylic acid is a potent inhibitor of influenza A and B virus neuraminidases

BacMap: an interactive picture atlas of annotated bacterial genomes

BacMap: an up-to-date electronic atlas of annotated bacterial genomes

Comparative Genomics Reveal That Host-Innate Immune Responses Influence the Clinical Prevalence of Legionella pneumophila Serogroups.

Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa ⬇️

Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis

Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance

Correction: Aurintricarboxylic Acid Is a Potent Inhibitor of Influenza A and B Virus Neuraminidases.

Development and applications of universal H7 subtype-specific antibodies for the analysis of influenza H7N9 vaccines

Draft Genome Sequences of Burkholderia contaminans FFI-28, a Strain Isolated from a Contaminated Pharmaceutical Solution.

Ebola sGP--the first viral glycoprotein shown to be C-mannosylated

Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti

First Complete Genome Sequence of Haemophilus influenzae Serotype a.

Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access

GOmotif: A web server for investigating the biological role of protein sequence motifs

Genomic Epidemiology and Molecular Resistance Mechanisms of Azithromycin-Resistant Neisseria gonorrhoeae in Canada from 1997 to 2014

High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak

Identification of HLA-G*01:17, a new allele possibly generated by an interloci gene conversion event involving exon 3 of HLA-B ⬇️

Identification of immunodominant CD8 epitope in the stalk domain of influenza B viral hemagglutinin

Impact of sequencing depth on the characterization of the microbiome and resistome. ⬇️

Interactive microbial genome visualization with GView ⬇️

Livestock-associated methicillin-resistant Staphylococcus aureus sequence type 398 in humans, Canada

Low abundance drug resistance variants in transmitted HIV drug resistance surveillance specimens identified using tagged pooled pyrosequencing ⬇️

MS-H: A Novel Proteomic Approach to Isolate and Type the E. coli H Antigen Using Membrane Filtration and Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) ⬇️

Microbiome Survey of the Inflamed and Noninflamed Gut at Different Compartments Within the Gastrointestinal Tract of Inflammatory Bowel Disease Patients

Microbiome profiling of drinking water in relation to incidence of inflammatory bowel disease

Molecular typing of a Legionella pneumophila outbreak in Ontario, Canada

Nationwide molecular surveillance of pandemic H1N1 influenza A virus genomes: Canada, 2009.

Next generation sequencing of the hepatitis C virus NS5B gene reveals potential novel S282 drug resistance mutations

Phylogenetic analysis of emergent Streptococcus pneumoniae serotype 22F causing invasive pneumococcal disease using whole genome sequencing

Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation

Pyrosequencing dried blood spots reveals differences in HIV drug resistance between treatment naïve and experienced patients

Quantitative Analyses of all Influenza Type A Viral Hemagglutinins and Neuraminidases using Universal Antibodies in Simple Slot Blot Assays ⬇️

Sequence database versioning for command line and Galaxy bioinformatics servers

Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria

Sylvatic plague in a Canadian black-tailed prairie dog (Cynomys ludovicianus).

Systematic analysis of host immunological pressure on the envelope gene of human immunodeficiency virus type 1 by an immunobioinformatics approach

Tatumella saanichensis sp. nov., isolated from a cystic fibrosis patient

The Gut Microbiota in Immune-Mediated Inflammatory Diseases

The Integrated Rapid Infectious Disease Analysis (IRIDA) Platform

The SR-rich motif in SARS-CoV nucleocapsid protein is important for virus replication.

The interaction between thymine DNA glycosylase and nuclear receptor coactivator 3 is required for the transcriptional activation of nuclear hormone receptors.

The universal epitope of influenza A viral neuraminidase fundamentally contributes to enzyme activity and viral replication

Universal anti-neuraminidase antibody inhibiting all influenza A subtypes

Universal antibodies against the highly conserved influenza fusion peptide cross-neutralize several subtypes of influenza A virus

Universal antibodies and their applications to the quantitative determination of virtually all subtypes of the influenza A viral hemagglutinins

Universal type/subtype-specific antibodies for quantitative analyses of neuraminidase in trivalent influenza vaccines

Unveiling Integrated Functional Pathways Leading to Enhanced Respiratory Disease Associated With Inactivated Respiratory Syncytial Viral Vaccine

Visualizing and comparing circular genomes using the CGView family of tools.

Whole genome sequencing and phylogenetic analysis of strains of the agent of Lyme disease Borrelia burgdorferi from Canadian emergence zones

Whole genome typing of the recently emerged Canadian serogroup W Neisseria meningitidis Sequence Type-11 clonal complex isolates associated with invasive meningococcal disease

Whole-genome phylogenomic heterogeneity of Neisseria gonorrhoeae isolates with decreased cephalosporin susceptibility collected in Canada between 1989 and 2013.

whole-genome sequence of livestock-associated st398 methicillin-resistant staphylococcus aureus Isolated from Humans in Canada