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Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes

scientific article published on 10 December 2019

Bacteria dialog with Santa Rosalia: Are aggregations of cosmopolitan bacteria mainly explained by habitat filtering or by ecological interactions?

artículo científico publicado en 2014

Bacterial lineages putatively associated with the dissemination of antibiotic resistance genes in a full-scale urban wastewater treatment plant

artículo científico publicado en 2018

COVER: a priori estimation of coverage for metagenomic sequencing

scientific article published on 17 April 2012

Complete Genome Sequence of Bacillus toyonensis BCT-7112T, the Active Ingredient of the Feed Additive Preparation Toyocerin.

artículo científico publicado en 2013

Complete Genome Sequence of a Cylindrospermopsin-Producing Cyanobacterium, Cylindrospermopsis raciborskii CS505, Containing a Circular Chromosome and a Single Extrachromosomal Element

artículo científico publicado en 2016

Cross-biome microbial networks reveal functional redundancy and suggest genome reduction through functional complementarity

artículo científico publicado en 2022

Diurnal Changes in Active Carbon and Nitrogen Pathways Along the Temperature Gradient in Porcelana Hot Spring Microbial Mat

article

Draft Genome Sequence of the Extremely Desiccation-Tolerant Cyanobacterium Gloeocapsopsis sp. Strain AAB1.

artículo científico publicado en 2018

Draft Genome Sequences of Two Ralstonia pickettii Strains with Different Aminoglycoside Resistance Phenotypes.

artículo científico publicado en 2016

Draft genome sequences of strains CS-508 and MVCC14, isolated from freshwater bloom events in Australia and Uruguay

article

EnvDB, a database for describing the environmental distribution of prokaryotic taxa.

artículo científico publicado en 2009

EnvMine: a text-mining system for the automatic extraction of contextual information

artículo científico publicado en 2010

In vivo attenuation and genetic evolution of a ST247-SCCmecI MRSA clone after 13 years of pathogenic bronchopulmonary colonization in a patient with cystic fibrosis: implications of the innate immune response.

artículo científico publicado en 2014

Intra-species diversity ensures the maintenance of functional microbial communities under changing environmental conditions

artículo científico publicado en 2019

Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation.

artículo científico publicado en 2012

Microbial nitrogen guilds in the oceans: from the bathypelagic to the ocean surface

artículo científico publicado en 2024

Microbiota characterization of sheep milk and its association with somatic cell count using 16s rRNA gene sequencing

artículo científico publicado en 2019

Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions

scientific article published on 16 August 2019

Mycobiome Profiles in Breast Milk from Healthy Women Depend on Mode of Delivery, Geographic Location, and Interaction with Bacteria

scientific article published on 18 April 2019

New insights into the archaeal diversity of a hypersaline microbial mat obtained by a metagenomic approach.

artículo científico publicado en 2013

Nitrogen cycling during an Arctic bloom: from chemolithotrophy to nitrogen assimilation

artículo científico publicado en 2024

On the fitness of microbial taxonomy.

artículo científico publicado en 2012

Quantifying Microbial Guilds

artículo científico publicado en 2023

Quantifying the Relative Importance of Phylogeny and Environmental Preferences As Drivers of Gene Content in Prokaryotic Microorganisms.

artículo científico publicado en 2016

Relating genomic characteristics to environmental preferences and ubiquity in different microbial taxa

artículo científico publicado en 2017

Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function

artículo científico publicado el 1 de agosto de 1997

SqueezeMeta, A Highly Portable, Fully Automatic Metagenomic Analysis Pipeline

artículo científico publicado en 2018

The Logic of Decision Making in Environmental Bacteria

The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene

artículo científico publicado en 2011

The logicome of environmental bacteria: merging catabolic and regulatory events with Boolean formalisms

artículo científico publicado en 2011