Lista de obras -

A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres

artículo científico publicado en 2015

A catalogue of 136 microbial draft genomes from Red Sea metagenomes.

artículo científico publicado en 2016

A complete domain-to-species taxonomy for Bacteria and Archaea

scientific article published on 27 April 2020

A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes

artículo científico publicado en 2015

A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life

artículo científico publicado en 2018

A unified catalog of 204,938 reference genomes from the human gut microbiome

artículo científico publicado en 2020

An evolving view of methane metabolism in the Archaea

scientific article published on 21 January 2019

An expanded genomic representation of the phylum cyanobacteria

artículo científico publicado en 2014

AnnoTree: visualization and exploration of a functionally annotated microbial tree of life

scientific article published on 01 May 2019

Author Correction: A complete domain-to-species taxonomy for Bacteria and Archaea

artículo científico publicado en 2020

Author Correction: Roadmap for naming uncultivated Archaea and Bacteria

artículo científico publicado en 2020

Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus

artículo científico publicado en 2015

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

artículo científico publicado en 2015

Chemotaxis may assist marine heterotrophic bacterial diazotrophs to find microzones suitable for N2 fixation in the pelagic ocean

artículo científico publicado en 2022

Classifying short genomic fragments from novel lineages using composition and homology.

artículo científico publicado en 2011

Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.).

artículo científico publicado en 2017

Comparative Genomics of Candidate Phylum TM6 Suggests That Parasitism Is Widespread and Ancestral in This Lineage.

artículo científico publicado en 2015

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

artículo científico publicado en 2018

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

article

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

article

Erratum: Addendum: Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.).

artículo científico publicado en 2018

Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order Caudovirales

scientific article published on 20 May 2019

First genomic insights into members of a candidate bacterial phylum responsible for wastewater bulking.

artículo científico publicado en 2015

GenGIS 2: Geospatial Analysis of Traditional and Genetic Biodiversity, with New Gradient Algorithms and an Extensible Plugin Framework ⬇️

artículo científico publicado el 29 de julio de 2013

GenGIS: A geospatial information system for genomic data.

artículo científico publicado en 2009

Genome-Based Microbial Taxonomy Coming of Age.

artículo científico publicado en 2016

Genome-Centric Analysis of Microbial Populations Enriched by Hydraulic Fracture Fluid Additives in a Coal Bed Methane Production Well

artículo científico publicado en 2016

GroopM: an automated tool for the recovery of population genomes from related metagenomes.

artículo científico publicado en 2014

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

artículo científico publicado en 2009

Measuring Community Similarity with Phylogenetic Networks ⬇️

artículo científico publicado el 21 de agosto de 2012

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics.

artículo científico publicado en 2015

Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota

artículo científico publicado en 2016

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

artículo científico publicado en 2017

On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria.

artículo científico publicado en 2017

Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes

artículo científico publicado en 2023

Rapid identification of high-confidence taxonomic assignments for metagenomic data ⬇️

artículo científico publicado el 24 de abril de 2012

Roadmap for naming uncultivated Archaea and Bacteria

artículo científico publicado en 2020

STAMP: statistical analysis of taxonomic and functional profiles.

artículo científico publicado en 2014

SeqCode: a nomenclatural code for prokaryotes described from sequence data

artículo científico publicado en 2022

The importance of designating type material for uncultured taxa

article

Lista de obras de

A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres

A catalogue of 136 microbial draft genomes from Red Sea metagenomes.

A complete domain-to-species taxonomy for Bacteria and Archaea

A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes

A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life

A unified catalog of 204,938 reference genomes from the human gut microbiome

An evolving view of methane metabolism in the Archaea

An expanded genomic representation of the phylum cyanobacteria

AnnoTree: visualization and exploration of a functionally annotated microbial tree of life

Author Correction: A complete domain-to-species taxonomy for Bacteria and Archaea

Author Correction: Roadmap for naming uncultivated Archaea and Bacteria

Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Chemotaxis may assist marine heterotrophic bacterial diazotrophs to find microzones suitable for N2 fixation in the pelagic ocean

Classifying short genomic fragments from novel lineages using composition and homology.

Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.).

Comparative Genomics of Candidate Phylum TM6 Suggests That Parasitism Is Widespread and Ancestral in This Lineage.

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

Erratum: Addendum: Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.).

Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order Caudovirales

First genomic insights into members of a candidate bacterial phylum responsible for wastewater bulking.

GenGIS 2: Geospatial Analysis of Traditional and Genetic Biodiversity, with New Gradient Algorithms and an Extensible Plugin Framework ⬇️

GenGIS: A geospatial information system for genomic data.

Genome-Based Microbial Taxonomy Coming of Age.

Genome-Centric Analysis of Microbial Populations Enriched by Hydraulic Fracture Fluid Additives in a Coal Bed Methane Production Well

GroopM: an automated tool for the recovery of population genomes from related metagenomes.

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

Measuring Community Similarity with Phylogenetic Networks ⬇️

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics.

Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria.

Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes

Rapid identification of high-confidence taxonomic assignments for metagenomic data ⬇️

Roadmap for naming uncultivated Archaea and Bacteria

STAMP: statistical analysis of taxonomic and functional profiles.

SeqCode: a nomenclatural code for prokaryotes described from sequence data

The importance of designating type material for uncultured taxa