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A Unique Transformation from Ordinary Differential Equations to Reaction Networks

artículo científico publicado el 22 de diciembre de 2010

A constraint solving approach to model reduction by tropical equilibration

artículo científico publicado en 2014

A general computational method for robustness analysis with applications to synthetic gene networks.

artículo científico publicado en 2009

A graphical method for reducing and relating models in systems biology

artículo científico publicado en 2010

A large-scale Boolean model of the rheumatoid arthritis fibroblast-like synoviocytes predicts drug synergies in the arthritic joint

artículo científico publicado en 2023

A stronger necessary condition for the multistationarity of chemical reaction networks

artículo científico publicado en 2013

Addressing <i>barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology</i>

Automated inference of Boolean models from molecular interaction maps using CaSQ

scientific article published on 13 May 2020

BIOCHAM: an environment for modeling biological systems and formalizing experimental knowledge

artículo científico publicado en 2006

COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms

Dynamics of the interlocked positive feedback loops explaining the robust epigenetic switching in Candida albicans.

artículo científico publicado en 2009

Graphical requirements for multistationarity in reaction networks and their verification in BioModels

artículo científico publicado en 2018

Guest editors' Introduction to the special section on computational methods in systems biology.

artículo científico publicado en 2013

Guest editors' introduction to the special section on computational methods in systems biology.

artículo científico publicado en 2012

Influence Networks Compared with Reaction Networks: Semantics, Expressivity and Attractors

scientific article published on 13 February 2018

Invariants and Other Structural Properties of Biochemical Models as a Constraint Satisfaction Problem

artículo científico publicado el 29 de mayo de 2012

Model-based investigation of the circadian clock and cell cycle coupling in mouse embryonic fibroblasts: Prediction of RevErb-α up-regulation during mitosis.

artículo científico publicado en 2016

Setting the basis of best practices and standards for curation and annotation of logical models in biology-highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop

scientific article published on 21 April 2020