Lista de obras -

An SF1 affinity model to identify branch point sequences in human introns

artículo científico publicado en 2010

Application of phenotypic microarrays to environmental microbiology

artículo científico

Cell-wide responses to low-oxygen exposure in Desulfovibrio vulgaris Hildenborough

artículo científico publicado en 2007

Characterization of NaCl tolerance in Desulfovibrio vulgaris Hildenborough through experimental evolution

artículo científico publicado en 2013

Co-evolution of proteins with their interaction partners

artículo científico publicado en 2000

Conservation of Modules but not Phenotype in Bacterial Response to Environmental Stress

Deletion of the Desulfovibrio vulgaris carbon monoxide sensor invokes global changes in transcription

artículo científico publicado en 2012

Evolutionary, mechanistic, and predictive analyses of the hydroxymethyldihydropterin pyrophosphokinase family of proteins

artículo científico publicado en 1999

Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation

artículo científico publicado en 2009

Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray

artículo científico publicado en 2003

Functional characterization of Crp/Fnr-type global transcriptional regulators in Desulfovibrio vulgaris Hildenborough

artículo científico publicado en 2011

Functional responses of methanogenic archaea to syntrophic growth

artículo científico publicado en 2012

Genetic Adaptation to Salt Stress in Experimental Evolution of Desulfovibrio vulgaris Hildenborough

Global transcriptional, physiological, and metabolite analyses of the responses of Desulfovibrio vulgaris hildenborough to salt adaptation

artículo científico publicado en 2009

How many rare diseases are there?

artículo científico publicado en 2020

Hydrogen peroxide-induced oxidative stress responses in Desulfovibrio vulgaris Hildenborough

artículo científico publicado en 2010

Identification of Small RNAs in Desulfovibrio vulgaris Hildenborough

Impact of elevated nitrate on sulfate-reducing bacteria: a comparative study of Desulfovibrio vulgaris

artículo científico publicado en 2010

JColorGrid: software for the visualization of biological measurements

artículo científico publicado en 2006

JEvTrace: refinement and variations of the evolutionary trace in JAVA

artículo científico publicado en 2002

KBase: The United States Department of Energy Systems Biology Knowledgebase

article

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

artículo científico publicado en 2020

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

artículo científico publicado en 2020

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

preprint published in 2023

MicrobesOnline: an integrated portal for comparative and functional genomics

artículo científico publicado en 2009

Microbial community changes during sustained Cr(VI) reduction at the 100H site in Hanford, WA

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and Follow-On Activities

artículo científico publicado en 2021

Mutual information analysis reveals coevolving residues in Tat that compensate for two distinct functions in HIV-1 gene expression

artículo científico publicado en 2012

Response of Desulfovibrio vulgaris to alkaline stress

artículo científico publicado en 2007

Revisiting Modes of energy generation in sulfate reducing bacteria

Semantic Integration of Clinical Laboratory Tests from Electronic Health Records for Deep Phenotyping and Biomarker Discovery: Supplementary materials

article

Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery

article

Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth

artículo científico publicado en 2011

Snapshot of iron response in Shewanella oneidensis by gene network reconstruction

artículo científico publicado en 2009

Structure prediction in a post-genomic environment: a secondary and tertiary structural model for the initiation factor 5A family

artículo científico publicado en 1998

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

artículo científico publicado en 2024

Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancer

scientific article published on 08 December 2021

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species

artículo científico publicado en 2020

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

artículo científico publicado en 2007

The impact of whole genome sequence data on drug discovery--a malaria case study

artículo científico publicado en 2001

Towards a rigorous network of protein-protein interactions of the model sulfate reducer Desulfovibrio vulgaris Hildenborough

artículo científico publicado en 2011

Transcriptomic and proteomic analyses of Desulfovibrio vulgaris biofilms: carbon and energy flow contribute to the distinct biofilm growth state

artículo científico publicado en 2012

Wheat cytosolic acetyl-CoA carboxylase complements an ACC1 null mutation in yeast.

artículo científico publicado en 1997

Why was this cited? Explainable machine learning applied to COVID-19 research literature

artículo científico publicado en 2022

Zinc against COVID-19? Symptom surveillance and deficiency risk groups

artículo científico publicado en 2021

Lista de obras de

An SF1 affinity model to identify branch point sequences in human introns

Application of phenotypic microarrays to environmental microbiology

Cell-wide responses to low-oxygen exposure in Desulfovibrio vulgaris Hildenborough

Characterization of NaCl tolerance in Desulfovibrio vulgaris Hildenborough through experimental evolution

Co-evolution of proteins with their interaction partners

Conservation of Modules but not Phenotype in Bacterial Response to Environmental Stress

Deletion of the Desulfovibrio vulgaris carbon monoxide sensor invokes global changes in transcription

Evolutionary, mechanistic, and predictive analyses of the hydroxymethyldihydropterin pyrophosphokinase family of proteins

Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation

Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray

Functional characterization of Crp/Fnr-type global transcriptional regulators in Desulfovibrio vulgaris Hildenborough

Functional responses of methanogenic archaea to syntrophic growth

Genetic Adaptation to Salt Stress in Experimental Evolution of Desulfovibrio vulgaris Hildenborough

Global transcriptional, physiological, and metabolite analyses of the responses of Desulfovibrio vulgaris hildenborough to salt adaptation

How many rare diseases are there?

Hydrogen peroxide-induced oxidative stress responses in Desulfovibrio vulgaris Hildenborough

Identification of Small RNAs in Desulfovibrio vulgaris Hildenborough

Impact of elevated nitrate on sulfate-reducing bacteria: a comparative study of Desulfovibrio vulgaris

JColorGrid: software for the visualization of biological measurements

JEvTrace: refinement and variations of the evolutionary trace in JAVA

KBase: The United States Department of Energy Systems Biology Knowledgebase

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

MicrobesOnline: an integrated portal for comparative and functional genomics

Microbial community changes during sustained Cr(VI) reduction at the 100H site in Hanford, WA

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and Follow-On Activities

Mutual information analysis reveals coevolving residues in Tat that compensate for two distinct functions in HIV-1 gene expression

Response of Desulfovibrio vulgaris to alkaline stress

Revisiting Modes of energy generation in sulfate reducing bacteria

Semantic Integration of Clinical Laboratory Tests from Electronic Health Records for Deep Phenotyping and Biomarker Discovery: Supplementary materials

Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery

Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth

Snapshot of iron response in Shewanella oneidensis by gene network reconstruction

Structure prediction in a post-genomic environment: a secondary and tertiary structural model for the initiation factor 5A family

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancer

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

The impact of whole genome sequence data on drug discovery--a malaria case study

Towards a rigorous network of protein-protein interactions of the model sulfate reducer Desulfovibrio vulgaris Hildenborough

Transcriptomic and proteomic analyses of Desulfovibrio vulgaris biofilms: carbon and energy flow contribute to the distinct biofilm growth state

Wheat cytosolic acetyl-CoA carboxylase complements an ACC1 null mutation in yeast.

Why was this cited? Explainable machine learning applied to COVID-19 research literature

Zinc against COVID-19? Symptom surveillance and deficiency risk groups