Lista de obras - Timothy M. Lohman - Dominio Público Uruguay

5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase

artículo científico publicado en 2010

A Dimer of Escherichia coli UvrD is the active form of the helicase in vitro

artículo científico publicado en 2003

A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA

artículo científico publicado en 2007

A novel chlorophyll protein complex in the repair cycle of photosystem II

scientific article published on 08 October 2019

ATP-dependent translocation of proteins along single-stranded DNA: models and methods of analysis of pre-steady state kinetics

artículo científico publicado en 2004

Active displacement of RecA filaments by UvrD translocase activity.

artículo científico publicado en 2015

Are the intrinsically disordered linkers involved in SSB binding to accessory proteins?

scientific article published on 01 September 2019

Asymmetric regulation of bipolar single-stranded DNA translocation by the two motors within Escherichia coli RecBCD helicase

artículo científico publicado en 2012

Autoinhibition of Escherichia coli Rep monomer helicase activity by its 2B subdomain

artículo científico publicado en 2005

Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro.

artículo científico publicado en 2007

Binding of the Dimeric Deinococcus radiodurans Single-Stranded DNA Binding Protein to Single-Stranded DNA ⬇️

artículo científico publicado el 28 de septiembre de 2010

Binding specificity of Escherichia coli single-stranded DNA binding protein for the chi subunit of DNA pol III holoenzyme and PriA helicase

artículo científico publicado en 2010

Chemo-mechanical pushing of proteins along single-stranded DNA.

artículo científico publicado en 2016

DNA unwinding step-size of E. coli RecBCD helicase determined from single turnover chemical quenched-flow kinetic studies

artículo científico publicado en 2002

DNA-binding orientation and domain conformation of the E. coli rep helicase monomer bound to a partial duplex junction: single-molecule studies of fluorescently labeled enzymes.

artículo científico publicado en 2004

Defining Single Molecular Forces Required for Notch Activation Using Nano Yoyo.

artículo científico publicado en 2016

Development of a single-stranded DNA-binding protein fluorescent fusion toolbox

scientific article published on 06 May 2020

Diffusion of human replication protein A along single-stranded DNA.

artículo científico publicado en 2014

Direct imaging of single UvrD helicase dynamics on long single-stranded DNA ⬇️

artículo científico publicado en 2013

Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein.

artículo científico publicado en 2007

E. coli SSB tetramer binds the first and second molecules of (dT)(35) with heat capacities of opposite sign

artículo científico

Effects of monovalent anions on a temperature-dependent heat capacity change for Escherichia coli SSB tetramer binding to single-stranded DNA

artículo científico publicado en 2006

Effects of temperature and ATP on the kinetic mechanism and kinetic step-size for E.coli RecBCD helicase-catalyzed DNA unwinding

artículo científico publicado en 2004

Ensemble methods for monitoring enzyme translocation along single stranded nucleic acids

artículo científico publicado en 2010

Erratum: SSB protein diffusion on single-stranded DNA stimulates RecA filament formation

artículo científico publicado en 2009

Fluorescence methods to study DNA translocation and unwinding kinetics by nucleic acid motors

artículo científico publicado en 2012

General Methods for Analysis of Sequential “n-step” Kinetic Mechanisms: Application to Single Turnover Kinetics of Helicase-Catalyzed DNA Unwinding ⬇️

artículo científico publicado el 1 de octubre de 2003

Glutamate promotes SSB protein-protein Interactions via intrinsically disordered regions

artículo científico publicado en 2017

Influence of DNA end structure on the mechanism of initiation of DNA unwinding by the Escherichia coli RecBCD and RecBC helicases

artículo científico publicado en 2008

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

artículo científico publicado en 2002

Intrinsically disordered C-terminal tails of E. coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA.

artículo científico publicado en 2015

Is a fully wrapped SSB-DNA complex essential for Escherichia coli survival?

artículo científico publicado en 2016

Kinetic mechanism for formation of the active, dimeric UvrD helicase-DNA complex

artículo científico publicado en 2003

Kinetic mechanism of direct transfer of Escherichia coli SSB tetramers between single-stranded DNA molecules

artículo científico publicado en 2002

Kinetics of motor protein translocation on single-stranded DNA.

artículo científico publicado en 2010

Large domain movements upon UvrD dimerization and helicase activation

artículo científico publicado en 2017

Mechanism of ATP-dependent translocation of E.coli UvrD monomers along single-stranded DNA.

artículo científico publicado en 2004

Microsecond dynamics of protein-DNA interactions: direct observation of the wrapping/unwrapping kinetics of single-stranded DNA around the E. coli SSB tetramer

artículo científico publicado en 2006

Modulation of Escherichia coli UvrD Single-Stranded DNA Translocation by DNA Base Composition

artículo científico publicado en 2017

Multiple C-terminal tails within a single E. coli SSB homotetramer coordinate DNA replication and repair

artículo científico publicado en 2013

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

artículo científico publicado en 2010

Plasmodium falciparum SSB Tetramer Wraps Single-Stranded DNA with Similar Topology but Opposite Polarity to E. coli SSB

artículo científico publicado en 2012

Plasmodium falciparum SSB tetramer binds single-stranded DNA only in a fully wrapped mode

artículo científico publicado en 2012

Polar destabilization of DNA duplexes with single-stranded overhangs by the Deinococcus radiodurans SSB protein.

artículo científico publicado en 2006

Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy

artículo científico publicado en 2004

Processive DNA Unwinding by RecBCD Helicase in the Absence of Canonical Motor Translocation

artículo científico publicado en 2016

Protein Environment and DNA Orientation Affect Protein-Induced Cy3 Fluorescence Enhancement

scientific article published on 07 June 2019

Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme

artículo científico publicado en 2015

Regulation of Nearest-Neighbor Cooperative Binding of E. coli SSB Protein to DNA

scientific article published on 28 October 2019

Regulation of Rep helicase unwinding by an auto-inhibitory subdomain

artículo científico publicado en 2019

Regulation of UvrD Helicase Activity by MutL

article

Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein

artículo científico publicado en 2010

Repetitive shuttling of a motor protein on DNA.

artículo científico publicado en 2005

Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding

artículo científico publicado en 2011

SSB as an organizer/mobilizer of genome maintenance complexes

artículo científico publicado en 2008

SSB binding to ssDNA using isothermal titration calorimetry

artículo científico publicado en 2012

SSB functions as a sliding platform that migrates on DNA via reptation.

artículo científico publicado en 2011

SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

scientific article published on 11 October 2009

SSB-DNA binding monitored by fluorescence intensity and anisotropy

artículo científico

Self-assembly of Escherichia coli MutL and its complexes with DNA

artículo científico publicado en 2011

Self-association equilibria of Escherichia coli UvrD helicase studied by analytical ultracentrifugation

artículo científico publicado en 2003

Single-molecule nanopositioning: structural transitions of a helicase-DNA complex during ATP hydrolysis

artículo científico publicado en 2011

Single-molecule views of protein movement on single-stranded DNA.

artículo científico publicado en 2012

Single-stranded DNA translocation of E. coli UvrD monomer is tightly coupled to ATP hydrolysis

artículo científico publicado en 2012

Srs2 prevents Rad51 filament formation by repetitive motion on DNA.

scientific article published on January 2013

Stopped-flow studies of the kinetics of single-stranded DNA binding and wrapping around the Escherichia coli SSB tetramer

artículo científico publicado en 2002

Structural Mechanisms of Cooperative DNA Binding by Bacterial Single-Stranded DNA-Binding Proteins

artículo científico publicado en 2018

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways.

artículo científico publicado en 2015

The 2B domain of the Escherichia coli Rep protein is not required for DNA helicase activity

artículo científico publicado en 2002

The C-terminal domain of full-length E. coli SSB is disordered even when bound to DNA.

artículo científico publicado en 2004

The primary and secondary translocase activities within E. coli RecBC helicase are tightly coupled to ATP hydrolysis by the RecB motor

artículo científico publicado en 2012

Ultrafast redistribution of E. coli SSB along long single-stranded DNA via intersegment transfer

artículo científico publicado en 2014

UvrD helicase activation by MutL involves rotation of its 2B subdomain

artículo científico publicado en 2019

Lista de obras de Timothy M. Lohman

5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase

A Dimer of Escherichia coli UvrD is the active form of the helicase in vitro

A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA

A novel chlorophyll protein complex in the repair cycle of photosystem II

ATP-dependent translocation of proteins along single-stranded DNA: models and methods of analysis of pre-steady state kinetics

Active displacement of RecA filaments by UvrD translocase activity.

Are the intrinsically disordered linkers involved in SSB binding to accessory proteins?

Asymmetric regulation of bipolar single-stranded DNA translocation by the two motors within Escherichia coli RecBCD helicase

Autoinhibition of Escherichia coli Rep monomer helicase activity by its 2B subdomain

Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro.

Binding of the Dimeric Deinococcus radiodurans Single-Stranded DNA Binding Protein to Single-Stranded DNA ⬇️

Binding specificity of Escherichia coli single-stranded DNA binding protein for the chi subunit of DNA pol III holoenzyme and PriA helicase

Chemo-mechanical pushing of proteins along single-stranded DNA.

DNA unwinding step-size of E. coli RecBCD helicase determined from single turnover chemical quenched-flow kinetic studies

DNA-binding orientation and domain conformation of the E. coli rep helicase monomer bound to a partial duplex junction: single-molecule studies of fluorescently labeled enzymes.

Defining Single Molecular Forces Required for Notch Activation Using Nano Yoyo.

Development of a single-stranded DNA-binding protein fluorescent fusion toolbox

Diffusion of human replication protein A along single-stranded DNA.

Direct imaging of single UvrD helicase dynamics on long single-stranded DNA ⬇️

Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein.

E. coli SSB tetramer binds the first and second molecules of (dT)(35) with heat capacities of opposite sign

Effects of monovalent anions on a temperature-dependent heat capacity change for Escherichia coli SSB tetramer binding to single-stranded DNA

Effects of temperature and ATP on the kinetic mechanism and kinetic step-size for E.coli RecBCD helicase-catalyzed DNA unwinding

Ensemble methods for monitoring enzyme translocation along single stranded nucleic acids

Erratum: SSB protein diffusion on single-stranded DNA stimulates RecA filament formation

Fluorescence methods to study DNA translocation and unwinding kinetics by nucleic acid motors

General Methods for Analysis of Sequential “n-step” Kinetic Mechanisms: Application to Single Turnover Kinetics of Helicase-Catalyzed DNA Unwinding ⬇️

Glutamate promotes SSB protein-protein Interactions via intrinsically disordered regions

Influence of DNA end structure on the mechanism of initiation of DNA unwinding by the Escherichia coli RecBCD and RecBC helicases

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

Intrinsically disordered C-terminal tails of E. coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA.

Is a fully wrapped SSB-DNA complex essential for Escherichia coli survival?

Kinetic mechanism for formation of the active, dimeric UvrD helicase-DNA complex

Kinetic mechanism of direct transfer of Escherichia coli SSB tetramers between single-stranded DNA molecules

Kinetics of motor protein translocation on single-stranded DNA.

Large domain movements upon UvrD dimerization and helicase activation

Mechanism of ATP-dependent translocation of E.coli UvrD monomers along single-stranded DNA.

Microsecond dynamics of protein-DNA interactions: direct observation of the wrapping/unwrapping kinetics of single-stranded DNA around the E. coli SSB tetramer

Modulation of Escherichia coli UvrD Single-Stranded DNA Translocation by DNA Base Composition

Multiple C-terminal tails within a single E. coli SSB homotetramer coordinate DNA replication and repair

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

Plasmodium falciparum SSB Tetramer Wraps Single-Stranded DNA with Similar Topology but Opposite Polarity to E. coli SSB

Plasmodium falciparum SSB tetramer binds single-stranded DNA only in a fully wrapped mode

Polar destabilization of DNA duplexes with single-stranded overhangs by the Deinococcus radiodurans SSB protein.

Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy

Processive DNA Unwinding by RecBCD Helicase in the Absence of Canonical Motor Translocation

Protein Environment and DNA Orientation Affect Protein-Induced Cy3 Fluorescence Enhancement

Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme

Regulation of Nearest-Neighbor Cooperative Binding of E. coli SSB Protein to DNA

Regulation of Rep helicase unwinding by an auto-inhibitory subdomain

Regulation of UvrD Helicase Activity by MutL

Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein

Repetitive shuttling of a motor protein on DNA.

Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding

SSB as an organizer/mobilizer of genome maintenance complexes

SSB binding to ssDNA using isothermal titration calorimetry

SSB functions as a sliding platform that migrates on DNA via reptation.

SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

SSB-DNA binding monitored by fluorescence intensity and anisotropy

Self-assembly of Escherichia coli MutL and its complexes with DNA

Self-association equilibria of Escherichia coli UvrD helicase studied by analytical ultracentrifugation

Single-molecule nanopositioning: structural transitions of a helicase-DNA complex during ATP hydrolysis

Single-molecule views of protein movement on single-stranded DNA.

Single-stranded DNA translocation of E. coli UvrD monomer is tightly coupled to ATP hydrolysis

Srs2 prevents Rad51 filament formation by repetitive motion on DNA.

Stopped-flow studies of the kinetics of single-stranded DNA binding and wrapping around the Escherichia coli SSB tetramer

Structural Mechanisms of Cooperative DNA Binding by Bacterial Single-Stranded DNA-Binding Proteins

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways.

The 2B domain of the Escherichia coli Rep protein is not required for DNA helicase activity

The C-terminal domain of full-length E. coli SSB is disordered even when bound to DNA.

The primary and secondary translocase activities within E. coli RecBC helicase are tightly coupled to ATP hydrolysis by the RecB motor

Ultrafast redistribution of E. coli SSB along long single-stranded DNA via intersegment transfer

UvrD helicase activation by MutL involves rotation of its 2B subdomain