Lista de obras - Stephen Busby - Dominio Público Uruguay

A comparison of the DNA bending activities of the DNA binding proteins CRP and TFIID.

artículo científico publicado en 1992

A cryptic promoter in the LEE1 regulatory region of enterohaemorrhagic Escherichia coli: promoter specificity in AT-rich gene regulatory regions.

artículo científico publicado en 2011

A novel promoter architecture for microaerobic activation by the anaerobic transcription factor FNR

artículo científico publicado en 2001

A unified resource for transcriptional regulation in Escherichia coli K-12 incorporating high-throughput-generated binding data into RegulonDB version 10.0

artículo científico publicado en 2018

Activating transcription in bacteria.

artículo científico

Activation of sigma 28-dependent transcription in Escherichia coli by the cyclic AMP receptor protein requires an unusual promoter organization.

artículo científico publicado en 2009

Affinity isolation and I-DIRT mass spectrometric analysis of the Escherichia coli O157:H7 Sakai RNA polymerase complex.

artículo científico publicado en 2007

An FNR-type regulator controls the anaerobic expression of hyn hydrogenase in Thiocapsa roseopersicina.

artículo científico publicado en 2005

An HcpR homologue from Desulfovibrio desulfuricans and its possible role in nitrate reduction and nitrosative stress

artículo científico publicado en 2011

Analysis of interactions between Activating Region 1 of Escherichia coli FNR protein and the C-terminal domain of the RNA polymerase alpha subunit: use of alanine scanning and suppression genetics.

artículo científico publicado en 2000

Analysis of mechanisms of activation and repression at bacterial promoters.

artículo científico publicado en 2008

Architectural requirements for optimal activation by tandem CRP molecules at a class I CRP-dependent promoter

artículo científico publicado en 2002

Assays for transcription factor activity

artículo científico publicado en 2001

Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome.

artículo científico

Autoregulation of the Escherichia coli melR promoter: repression involves four molecules of MelR.

artículo científico publicado en 2008

Binding of the Escherichia coli MelR protein to the melAB promoter: orientation of MelR subunits and investigation of MelR-DNA contacts.

artículo científico publicado en 2003

Characterization of multiple promoters and transcript stability in the sacB-sacC gene cluster in Zymomonas mobilis.

artículo científico publicado en 2009

Chromosome position effects on gene expression in Escherichia coli K-12.

artículo científico publicado en 2014

Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: use of a new broad-host-range promoter-probe plasmid

artículo científico publicado en 1990

Competition between NarL-dependent activation and Fis-dependent repression controls expression from the Escherichia coli yeaR and ogt promoters.

artículo científico publicado en 2009

DNA barcodes for rapid, whole genome, single-molecule analyses

scientific article published on 01 July 2019

Definition of nitrite and nitrate response elements at the anaerobically inducible Escherichia coli nirB promoter: interactions between FNR and NarL.

artículo científico publicado en 1993

Direct methods for studying transcription regulatory proteins and RNA polymerase in bacteria.

artículo científico publicado en 2009

Double locking of an Escherichia coli promoter by two repressors prevents premature colicin expression and cell lysis.

artículo científico publicado en 2012

Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression ⬇️

artículo científico publicado el 13 de octubre de 2010

Effects of substitutions at position 180 in the Escherichia coli RNA polymerase σ 70 subunit.

artículo científico publicado en 2011

Escherichia coli "TatExpress" strains export several g/L human growth hormone to the periplasm by the Tat pathway

scientific article published on 02 September 2019

Escherichia coli "TatExpress" strains super-secrete human growth hormone into the bacterial periplasm by the Tat pathway.

artículo científico publicado en 2017

Exploitation of a chemical nuclease to investigate the location and orientation of the Escherichia coli RNA polymerase alpha subunit C-terminal domains at simple promoters that are activated by cyclic AMP receptor protein.

artículo científico publicado en 2003

Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays.

artículo científico publicado en 2004

Global regulators of transcription in Escherichia coli: mechanisms of action and methods for study.

artículo científico publicado en 2008

Host attachment and fluid shear are integrated into a mechanical signal regulating virulence in Escherichia coli O157:H7.

artículo científico publicado en 2015

Identification and analysis of 'extended -10' promoters in Escherichia coli.

artículo científico publicado en 2003

Independent regulation of the divergent Escherichia coli nrfA and acsP1 promoters by a nucleoprotein assembly at a shared regulatory region.

artículo científico publicado en 2002

Interactions between activating region 3 of the Escherichia coli cyclic AMP receptor protein and region 4 of the RNA polymerase sigma(70) subunit: application of suppression genetics.

artículo científico publicado en 2000

Interconversion between bound and free conformations of LexA orchestrates the bacterial SOS response.

artículo científico publicado en 2011

Investigations of the modular structure of bacterial promoters

artículo científico publicado en 2006

Local and global regulation of transcription initiation in bacteria

artículo científico publicado en 2016

Location and dynamics of an active promoter in Escherichia coli K-12 ⬇️

artículo científico publicado el 1 de enero de 2012

Location and orientation of an activating region in the Escherichia coli transcription factor, FNR.

artículo científico

Location and sequence of the promoter of the gene for the NADH-dependent nitrite reductase of Escherichia coli and its regulation by oxygen, the Fnr protein and nitrite.

artículo científico publicado en 1987

Location of the Escherichia coli RNA polymerase alpha subunit C-terminal domain at an FNR-dependent promoter: analysis using an artificial nuclease.

artículo científico publicado en 2004

Mass spectrometry of Escherichia coli RNA polymerase: interactions of the core enzyme with sigma70 and Rsd protein.

artículo científico publicado en 2004

Microarray analysis of the Ler regulon in enteropathogenic and enterohaemorrhagic Escherichia coli strains

artículo científico publicado en 2014

Modulation of CRP-dependent transcription at the Escherichia coli acsP2 promoter by nucleoprotein complexes: anti-activation by the nucleoid proteins FIS and IHF.

artículo científico publicado en 2004

Mutational analysis of the Escherichia coli melR gene suggests a two-state concerted model to explain transcriptional activation and repression in the melibiose operon

artículo científico

Mutational analysis of the nucleotide sequence at the FNR-dependent nirB promoter in Escherichia coli.

artículo científico publicado en 1989

Mutations that alter the ability of the Escherichia coli cyclic AMP receptor protein to activate transcription.

artículo científico publicado en 1990

Mutations that increase the activity of the promoter of the Escherichia coli melibiose operon improve the binding of MelR, a transcription activator triggered by melibiose.

artículo científico

New targets for the cyclic AMP receptor protein in the Escherichia coli K-12 genome.

artículo científico publicado en 2007

Organization and architecture of AggR-dependent promoters from enteroaggregative Escherichia coli

artículo científico publicado en 2019

Oxygen and contact with human intestinal epithelium independently stimulate virulence gene expression in enteroaggregative Escherichia coli

article

Point mutations in the DNA- and cNMP-binding domains of the homologue of the cAMP receptor protein (CRP) in Mycobacterium bovis BCG: implications for the inactivation of a global regulator and strain attenuation.

artículo científico publicado en 2005

Positioning of region 4 of the Escherichia coli RNA polymerase sigma(70) subunit by a transcription activator.

artículo científico publicado en 2000

RNA polymerase supply and flux through the lac operon in Escherichia coli.

artículo científico publicado en 2016

Recruitment of RNA polymerase to Class II CRP-dependent promoters is improved by a second upstream-bound CRP molecule

artículo científico publicado en 2006

Redefining fundamental concepts of transcription initiation in bacteria

artículo científico publicado en 2020

Regulation of RamA by RamR in Salmonella enterica serovar Typhimurium: isolation of a RamR superrepressor

artículo científico publicado en 2012

Regulation of acetyl coenzyme A synthetase in Escherichia coli.

artículo científico publicado en 2000

Regulation of nrf operon expression in pathogenic enteric bacteria: sequence divergence reveals new regulatory complexity

artículo científico publicado en 2017

Regulation, sensory domains and roles of two Desulfovibrio desulfuricans ATCC27774 Crp family transcription factors, HcpR1 and HcpR2, in response to nitrosative stress.

artículo científico publicado en 2016

Repression of the Escherichia coli melR promoter by MelR: evidence that efficient repression requires the formation of a repression loop.

artículo científico

Requirement for two copies of RNA polymerase alpha subunit C-terminal domain for synergistic transcription activation at complex bacterial promoters

artículo científico publicado en 2002

Role of activating region 1 of Escherichia coli FNR protein in transcription activation at class II promoters.

artículo científico publicado en 2000

Role of the RNA polymerase alpha subunits in CII-dependent activation of the bacteriophage lambda pE promoter: identification of important residues and positioning of the alpha C-terminal domains.

artículo científico publicado en 2004

Roles of effectors in XylS-dependent transcription activation: intramolecular domain derepression and DNA binding

artículo científico publicado en 2008

Selective repression by Fis and H-NS at the Escherichia coli dps promoter.

artículo científico publicado en 2008

SepL resembles an aberrant effector in binding to a class 1 type III secretion chaperone and carrying an N-terminal secretion signal

artículo científico publicado en 2010

Serine substitution for cysteine residues in levansucrase selectively abolishes levan forming activity

artículo científico publicado el 1 de octubre de 2003

Silencing of DNase Colicin E8 Gene Expression by a Complex Nucleoprotein Assembly Ensures Timely Colicin Induction.

artículo científico publicado en 2015

Spacing requirements for Class I transcription activation in bacteria are set by promoter elements

artículo científico publicado en 2014

Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome.

artículo científico publicado en 2005

Suppression of FNR-dependent transcription activation at the Escherichia coli nir promoter by Fis, IHF and H-NS: modulation of transcription initiation by a complex nucleo-protein assembly.

artículo científico publicado en 2000

Targets for the MalI repressor at the divergent Escherichia coli K-12 malX-malI promoters

artículo científico publicado en 2010

The Escherichia coli K-12 MntR miniregulon includes dps, which encodes the major stationary-phase DNA-binding protein

artículo científico publicado en 2011

The Escherichia coli K-12 NarL and NarP proteins insulate the nrf promoter from the effects of integration host factor.

artículo científico publicado en 2006

The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions.

artículo científico publicado en 2008

The PAR promoter expression system: Modified lac promoters for controlled recombinant protein production in Escherichia coli

artículo científico publicado en 2021

The bacterial LexA transcriptional repressor.

artículo científico publicado en 2009

The new bacteriology

artículo científico publicado en 2016

The nirB promoter of Escherichia coli: location of nucleotide sequences essential for regulation by oxygen, the FNR protein and nitrite.

artículo científico publicado en 1988

The role of two surface exposed loops in transcription activation by the Escherichia coli CRP and FNR proteins.

artículo científico publicado en 1991

Tracking Low-Copy Transcription Factors in Living Bacteria: The Case of the lac Repressor.

artículo científico publicado en 2017

Transcription activation at the Escherichia coli melAB promoter: interactions of MelR with its DNA target site and with domain 4 of the RNA polymerase sigma subunit.

artículo científico publicado en 2004

Transcription activation by FNR: evidence for a functional activating region 2.

artículo científico publicado en 2002

Transcription activation in bacteria: ancient and modern

artículo científico publicado en 2019

Transcription factor distribution in Escherichia coli: studies with FNR protein.

artículo científico publicado en 2006

Transcription initiation in the Escherichia coli K-12 malI-malX intergenic region and the role of the cyclic AMP receptor protein.

artículo científico publicado en 2008

Transcription of the plasmid-encoded toxin gene from enteroaggregative Escherichia coli is regulated by a novel co-activation mechanism involving CRP and Fis.

artículo científico publicado en 2011

Transcription regulation by tandem-bound FNR at Escherichia coli promoters.

artículo científico publicado en 2003

UP element-dependent transcription at the Escherichia coli rrnB P1 promoter: positional requirements and role of the RNA polymerase alpha subunit linker.

artículo científico publicado en 2001

Unusual organization, complexity and redundancy at the Escherichia coli hcp-hcr operon promoter

artículo científico publicado en 2010

Lista de obras de Stephen Busby

A comparison of the DNA bending activities of the DNA binding proteins CRP and TFIID.

A cryptic promoter in the LEE1 regulatory region of enterohaemorrhagic Escherichia coli: promoter specificity in AT-rich gene regulatory regions.

A novel promoter architecture for microaerobic activation by the anaerobic transcription factor FNR

A unified resource for transcriptional regulation in Escherichia coli K-12 incorporating high-throughput-generated binding data into RegulonDB version 10.0

Activating transcription in bacteria.

Activation of sigma 28-dependent transcription in Escherichia coli by the cyclic AMP receptor protein requires an unusual promoter organization.

Affinity isolation and I-DIRT mass spectrometric analysis of the Escherichia coli O157:H7 Sakai RNA polymerase complex.

An FNR-type regulator controls the anaerobic expression of hyn hydrogenase in Thiocapsa roseopersicina.

An HcpR homologue from Desulfovibrio desulfuricans and its possible role in nitrate reduction and nitrosative stress

Analysis of interactions between Activating Region 1 of Escherichia coli FNR protein and the C-terminal domain of the RNA polymerase alpha subunit: use of alanine scanning and suppression genetics.

Analysis of mechanisms of activation and repression at bacterial promoters.

Architectural requirements for optimal activation by tandem CRP molecules at a class I CRP-dependent promoter

Assays for transcription factor activity

Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome.

Autoregulation of the Escherichia coli melR promoter: repression involves four molecules of MelR.

Binding of the Escherichia coli MelR protein to the melAB promoter: orientation of MelR subunits and investigation of MelR-DNA contacts.

Characterization of multiple promoters and transcript stability in the sacB-sacC gene cluster in Zymomonas mobilis.

Chromosome position effects on gene expression in Escherichia coli K-12.

Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: use of a new broad-host-range promoter-probe plasmid

Competition between NarL-dependent activation and Fis-dependent repression controls expression from the Escherichia coli yeaR and ogt promoters.

DNA barcodes for rapid, whole genome, single-molecule analyses

Definition of nitrite and nitrate response elements at the anaerobically inducible Escherichia coli nirB promoter: interactions between FNR and NarL.

Direct methods for studying transcription regulatory proteins and RNA polymerase in bacteria.

Double locking of an Escherichia coli promoter by two repressors prevents premature colicin expression and cell lysis.

Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression ⬇️

Effects of substitutions at position 180 in the Escherichia coli RNA polymerase σ 70 subunit.

Escherichia coli "TatExpress" strains export several g/L human growth hormone to the periplasm by the Tat pathway

Escherichia coli "TatExpress" strains super-secrete human growth hormone into the bacterial periplasm by the Tat pathway.

Exploitation of a chemical nuclease to investigate the location and orientation of the Escherichia coli RNA polymerase alpha subunit C-terminal domains at simple promoters that are activated by cyclic AMP receptor protein.

Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays.

Global regulators of transcription in Escherichia coli: mechanisms of action and methods for study.

Host attachment and fluid shear are integrated into a mechanical signal regulating virulence in Escherichia coli O157:H7.

Identification and analysis of 'extended -10' promoters in Escherichia coli.

Independent regulation of the divergent Escherichia coli nrfA and acsP1 promoters by a nucleoprotein assembly at a shared regulatory region.

Interactions between activating region 3 of the Escherichia coli cyclic AMP receptor protein and region 4 of the RNA polymerase sigma(70) subunit: application of suppression genetics.

Interconversion between bound and free conformations of LexA orchestrates the bacterial SOS response.

Investigations of the modular structure of bacterial promoters

Local and global regulation of transcription initiation in bacteria

Location and dynamics of an active promoter in Escherichia coli K-12 ⬇️

Location and orientation of an activating region in the Escherichia coli transcription factor, FNR.

Location and sequence of the promoter of the gene for the NADH-dependent nitrite reductase of Escherichia coli and its regulation by oxygen, the Fnr protein and nitrite.

Location of the Escherichia coli RNA polymerase alpha subunit C-terminal domain at an FNR-dependent promoter: analysis using an artificial nuclease.

Mass spectrometry of Escherichia coli RNA polymerase: interactions of the core enzyme with sigma70 and Rsd protein.

Microarray analysis of the Ler regulon in enteropathogenic and enterohaemorrhagic Escherichia coli strains

Modulation of CRP-dependent transcription at the Escherichia coli acsP2 promoter by nucleoprotein complexes: anti-activation by the nucleoid proteins FIS and IHF.

Mutational analysis of the Escherichia coli melR gene suggests a two-state concerted model to explain transcriptional activation and repression in the melibiose operon

Mutational analysis of the nucleotide sequence at the FNR-dependent nirB promoter in Escherichia coli.

Mutations that alter the ability of the Escherichia coli cyclic AMP receptor protein to activate transcription.

Mutations that increase the activity of the promoter of the Escherichia coli melibiose operon improve the binding of MelR, a transcription activator triggered by melibiose.

New targets for the cyclic AMP receptor protein in the Escherichia coli K-12 genome.

Organization and architecture of AggR-dependent promoters from enteroaggregative Escherichia coli

Oxygen and contact with human intestinal epithelium independently stimulate virulence gene expression in enteroaggregative Escherichia coli

Point mutations in the DNA- and cNMP-binding domains of the homologue of the cAMP receptor protein (CRP) in Mycobacterium bovis BCG: implications for the inactivation of a global regulator and strain attenuation.

Positioning of region 4 of the Escherichia coli RNA polymerase sigma(70) subunit by a transcription activator.

RNA polymerase supply and flux through the lac operon in Escherichia coli.

Recruitment of RNA polymerase to Class II CRP-dependent promoters is improved by a second upstream-bound CRP molecule

Redefining fundamental concepts of transcription initiation in bacteria

Regulation of RamA by RamR in Salmonella enterica serovar Typhimurium: isolation of a RamR superrepressor

Regulation of acetyl coenzyme A synthetase in Escherichia coli.

Regulation of nrf operon expression in pathogenic enteric bacteria: sequence divergence reveals new regulatory complexity

Regulation, sensory domains and roles of two Desulfovibrio desulfuricans ATCC27774 Crp family transcription factors, HcpR1 and HcpR2, in response to nitrosative stress.

Repression of the Escherichia coli melR promoter by MelR: evidence that efficient repression requires the formation of a repression loop.

Requirement for two copies of RNA polymerase alpha subunit C-terminal domain for synergistic transcription activation at complex bacterial promoters

Role of activating region 1 of Escherichia coli FNR protein in transcription activation at class II promoters.

Role of the RNA polymerase alpha subunits in CII-dependent activation of the bacteriophage lambda pE promoter: identification of important residues and positioning of the alpha C-terminal domains.

Roles of effectors in XylS-dependent transcription activation: intramolecular domain derepression and DNA binding

Selective repression by Fis and H-NS at the Escherichia coli dps promoter.

SepL resembles an aberrant effector in binding to a class 1 type III secretion chaperone and carrying an N-terminal secretion signal

Serine substitution for cysteine residues in levansucrase selectively abolishes levan forming activity

Silencing of DNase Colicin E8 Gene Expression by a Complex Nucleoprotein Assembly Ensures Timely Colicin Induction.

Spacing requirements for Class I transcription activation in bacteria are set by promoter elements

Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome.

Suppression of FNR-dependent transcription activation at the Escherichia coli nir promoter by Fis, IHF and H-NS: modulation of transcription initiation by a complex nucleo-protein assembly.

Targets for the MalI repressor at the divergent Escherichia coli K-12 malX-malI promoters

The Escherichia coli K-12 MntR miniregulon includes dps, which encodes the major stationary-phase DNA-binding protein

The Escherichia coli K-12 NarL and NarP proteins insulate the nrf promoter from the effects of integration host factor.

The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions.

The PAR promoter expression system: Modified lac promoters for controlled recombinant protein production in Escherichia coli

The bacterial LexA transcriptional repressor.