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Lista de obras de Sebastian Doniach

A comparative study of motor-protein motions by using a simple elastic-network model

artículo científico publicado en 2003

A computer model to dynamically simulate protein folding: studies with crambin.

artículo científico publicado en 1989

A lysozyme folding intermediate revealed by solution X-ray scattering

artículo científico publicado en 1996

A repulsive field: advances in the electrostatics of the ion atmosphere

artículo científico publicado en 2008

ATP-independent reversal of a membrane protein aggregate by a chloroplast SRP subunit

artículo científico publicado en 2010

Absolute Intramolecular Distance Measurements with Angstrom-Resolution Using Anomalous Small-Angle X-ray Scattering

artículo científico publicado en 2016

Adaptive time stepping in biomolecular dynamics

artículo científico publicado en 2005

Analysis of small-angle X-ray scattering data of protein–detergent complexes by singular value decomposition

Angular correlations of photons from solution diffraction at a free-electron laser encode molecular structure

artículo científico publicado en 2016

Anion-induced folding of Staphylococcal nuclease: characterization of multiple equilibrium partially folded intermediates ⬇️

artículo científico publicado el 15 de mayo de 1998

Anomalous x-ray scattering from terbium-labeled parvalbumin in solution

artículo científico publicado en 1983

Anomalously large gap anisotropy in the a-b plane of Bi2Sr2CaCu2O8+ delta

artículo científico publicado en 1993

Applications of X-ray photoabsorption spectroscopy to the determination of local structure in organometallic compounds

artículo científico publicado en 1976

AquaSAXS: a web server for computation and fitting of SAXS profiles with non-uniformally hydrated atomic models

artículo científico publicado en 2011

Association of partially-folded intermediates of staphylococcal nuclease induces structure and stability

artículo científico publicado en 1999

Association-induced folding of globular proteins ⬇️

artículo científico publicado el 12 de mayo de 1998

Biological Physics: Energy, Information, Life Biological Physics: Energy, Information, Life , Philip Nelson (with the assistance of Marko Radosavljević and Sarina Bromberg ) W. H. Freeman, New York, 2003. $92.00 (598 pp.). ISBN 0-7167-4372-8

Biophysical properties of the synucleins and their propensities to fibrillate: inhibition of alpha-synuclein assembly by beta- and gamma-synucleins

artículo científico publicado en 2002

Blue form of bacteriorhodopsin and its order-disorder transition during dehydration

artículo científico publicado en 1994

Calculation of angle-resolved photoemission and tunneling for a CuO2 layer in the normal and superconducting states

scientific article published on 01 May 1993

Caulobacter chromosome in vivo configuration matches model predictions for a supercoiled polymer in a cell-like confinement

artículo científico publicado en 2013

Chain collapse can occur concomitantly with the rate-limiting step in protein folding

artículo científico publicado en 1999

Changes in Biomolecular Conformation Seen by Small Angle X-ray Scattering ⬇️

artículo científico publicado el 1 de junio de 2001

Characterization of transient intermediates in lysozyme folding with time-resolved small-angle X-ray scattering

artículo científico publicado en 1999

Closing the folding chamber of the eukaryotic chaperonin requires the transition state of ATP hydrolysis

artículo científico publicado en 2003

Coexistence of antiferromagnetism and superconductivity in a mean-field theory of high-Tc superconductors

artículo científico publicado en 1988

Combining single-molecule optical trapping and small-angle x-ray scattering measurements to compute the persistence length of a protein ER/K alpha-helix.

artículo científico publicado en 2009

Computer simulation of antibody binding specificity

artículo científico publicado en 1993

Computers for Scientific Research

artículo científico publicado en 1967

Counterion distribution around DNA probed by solution X-ray scattering

scientific article published on 08 May 2003

Critical assessment of nucleic acid electrostatics via experimental and computational investigation of an unfolded state ensemble

artículo científico publicado en 2008

Dependence of micelle size and shape on detergent alkyl chain length and head group

artículo científico publicado en 2013

Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding

artículo científico publicado en 2010

Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques

artículo científico publicado en 2002

Do conformational biases of simple helical junctions influence RNA folding stability and specificity?

artículo científico publicado en 2009

Doping dependence of antiferromagnetic correlations in high-temperature superconductors

artículo científico publicado en 1988

Dynamic bond constraints in protein Langevin dynamics

artículo científico publicado en 2006

Dynamic charge interactions create surprising rigidity in the ER/K alpha-helical protein motif

artículo científico publicado en 2008

Dynamical Phase Transition in a Driven Disordered Vortex Lattice

artículo científico publicado en 1996

Early work with synchrotron radiation at stanford

artículo científico publicado en 1997

Effect of association state and conformational stability on the kinetics of immunoglobulin light chain amyloid fibril formation at physiological pH.

artículo científico publicado en 2002

Effect of self-organized criticality on magnetic-flux creep in type-II superconductors: A time-delayed approach

artículo científico publicado en 1994

Effects of columnar pins on flux line dynamics

scientific article published on 01 December 1993

Effects of nitration on the structure and aggregation of alpha-synuclein

artículo científico publicado en 2005

Electronic structure and optical properties of FeSi, a strongly correlated insulator

artículo científico publicado en 1994

Electrostatics of Nucleic Acid Folding under Conformational Constraint ⬇️

artículo científico publicado el 27 de febrero de 2012

Elucidation of the molecular mechanism during the early events in immunoglobulin light chain amyloid fibrillation. Evidence for an off-pathway oligomer at acidic pH.

artículo científico publicado en 2002

Enhanced electron pairing in a lattice of Berry-phase molecules

artículo científico publicado en 1995

Equilibrium collapse and the kinetic 'foldability' of proteins

artículo científico publicado en 2002

Erratum: Coexistence of antiferromagnetism and superconductivity in a mean-field theory of high-Tc superconductors

artículo científico publicado en 1989

Evaluation of ion binding to DNA duplexes using a size-modified Poisson-Boltzmann theory

artículo científico publicado en 2007

Evidence of an associative intermediate on the myoglobin refolding pathway

artículo científico publicado en 1993

Exploring the folding landscape of a structured RNA

artículo científico publicado en 2002

Expression, purification, and characterization of Thermotoga maritima membrane proteins for structure determination

artículo científico publicado en 2006

Fermi-liquid phase of the t-J model and the Hall coefficient in the high-temperature superconductors

scientific article published on 01 March 1992

Fermions and solitons in the O(3) nonlinear sigma model in 2+1 space-time dimensions

artículo científico publicado en 1990

Field-Driven Topological Glass Transition in a Model Flux Line Lattice

scientific article published on 01 September 1996

Fold recognition aided by constraints from small angle X-ray scattering data

artículo científico publicado en 2005

Fourth-generation X-ray sources: some possible applications to biology

artículo científico publicado en 2000

Gold nanocrystal labels provide a sequence-to-3D structure map in SAXS reconstructions.

artículo científico publicado en 2018

High Magnetic Fields

How large is an alpha-helix? Studies of the radii of gyration of helical peptides by small-angle X-ray scattering and molecular dynamics

artículo científico publicado en 2005

Kinetics of lysozyme refolding: structural characterization of a non-specifically collapsed state using time-resolved X-ray scattering ⬇️

artículo científico publicado el 13 de febrero de 1998

Location of terbium binding sites on acetylcholine receptor-enriched membranes

scientific article published on 01 June 1986

Long single alpha-helical tail domains bridge the gap between structure and function of myosin VI.

artículo científico publicado en 2008

Long-range Coulomb interactions and the onset of superconductivity in the high-Tc materials

artículo científico publicado en 1990

Low-Temperature Properties of Nearly Ferromagnetic Fermi Liquids

artículo científico publicado en 1966

Magnetic instability of a highly degenerate Kondo lattice

artículo científico publicado en 1987

MgATP-induced conformational changes in the iron protein from Azotobacter vinelandii, as studied by small-angle x-ray scattering.

artículo científico publicado en 1994

Microscopic metal clusters and Schottky barrier formation

scientific article published on 01 February 1987

MinActionPath: maximum likelihood trajectory for large-scale structural transitions in a coarse-grained locally harmonic energy landscape

artículo científico publicado en 2007

Mis-translation of a computationally designed protein yields an exceptionally stable homodimer: implications for protein engineering and evolution

artículo científico publicado en 2006

Mixing and Matching Detergents for Membrane Protein NMR Structure Determination

Mixing and matching detergents for membrane protein NMR structure determination

artículo científico publicado en 2009

Model for a strongly correlated insulator: FeSi

artículo científico publicado en 1995

Modeling solvation contributions to conformational free energy changes of biomolecules using a potential of mean force expansion

article published in 1995

Monte Carlo simulation of flux lattice melting in a model high-Tc superconductor

artículo científico publicado en 1992

Multiple time step diffusive Langevin dynamics for proteins ⬇️

artículo científico publicado el 15 de febrero de 1998

NIH-study-section scoring

artículo científico publicado en 1999

Natively unfolded C-terminal domain of caldesmon remains substantially unstructured after the effective binding to calmodulin

artículo científico publicado en 2003

Natively unfolded human prothymosin alpha adopts partially folded collapsed conformation at acidic pH.

artículo científico publicado en 1999

Network of dynamically important residues in the open/closed transition in polymerases is strongly conserved

scientific article published on 01 April 2005

Nuclear localization of alpha-synuclein and its interaction with histones

artículo científico publicado en 2003

Observation of correlated X-ray scattering at atomic resolution

artículo científico publicado en 2014

Partially folded intermediates in insulin fibrillation

artículo científico publicado en 2003

Partially folded states of proteins: characterization by X-ray scattering

scientific article published on 01 December 1995

Penson-Kolb-Hubbard model: A study of the competition between single-particle and pair hopping in one dimension

artículo científico publicado en 1993

Phase slips and switching in charge-density-wave transport

artículo científico publicado en 1988

Phase transitions in uniformly frustrated XY models

artículo científico publicado en 1985

Polarized x-ray absorption spectra of oriented plastocyanin single crystals. Investigation of methionine-copper coordination

artículo científico publicado en 1982

Potential for measurement of the distribution of DNA folds in complex environments using Correlated X-ray Scattering

artículo científico publicado en 2015

Potentials of mean force for biomolecular simulations: Theory and test on alanine dipeptide

Prediction of the association state of insulin using spectral parameters

artículo científico publicado en 2003

Principles of RNA Compaction: Insights from the Equilibrium Folding Pathway of the P4-P6 RNA Domain in Monovalent Cations

scholarly article by Keiji Takamoto published in November 2004

Probing counterion modulated repulsion and attraction between nucleic acid duplexes in solution

artículo científico publicado en 2005

Protein Denaturation: A Small-Angle X-ray Scattering Study of the Ensemble of Unfolded States of Cytochrome c ⬇️

artículo científico publicado el 8 de septiembre de 1998

Protein dynamics simulations from nanoseconds to microseconds

artículo científico publicado en 1999

Protein flexibility in solution and in crystals

article published in 1999

Protein misfolding and amyloid formation for the peptide GNNQQNY from yeast prion protein Sup35: simulation by reaction path annealing

artículo científico publicado en 2005

Protein structure prediction constrained by solution X-ray scattering data and structural homology identification.

artículo científico publicado en 2002

Quantitative and comprehensive decomposition of the ion atmosphere around nucleic acids

artículo científico publicado en 2007

RNA Structure, Function, and (Thermo-) Dynamics: A SAXS and Single-Molecule Perspective

Random-coil behavior and the dimensions of chemically unfolded proteins

scholarly article

Rapid compaction during RNA folding

artículo científico publicado en 2002

Reconstruction of low-resolution three-dimensional density maps from one-dimensional small-angle X-ray solution scattering data for biomolecules

article by Dirk Walther et al published 1 April 2000 in Journal of Applied Crystallography

Redistribution of terbium ions across acetylcholine receptor-enriched membranes induced by agonist desensitization

artículo científico publicado en 2009

Relativistic extension of the spin-polarized local-density-functional theory: Study of the electronic and magnetic properties of the rare-earth ions

scientific article published on 01 May 1985

Riboswitch conformations revealed by small-angle X-ray scattering

artículo científico publicado en 2009

Salt dependence of the radius of gyration and flexibility of single-stranded DNA in solution probed by small-angle x-ray scattering

artículo científico publicado en 2012

Scaling Behavior of Single Stranded DNA Measured by Small Angle X-ray Scattering

Simulations of the thermodynamic properties of a short polyalanine peptide using potentials of mean force

Size and shape of detergent micelles determined by small-angle X-ray scattering

artículo científico publicado en 2007

Small angle X-ray scattering reveals a compact intermediate in RNA folding

artículo científico publicado en 2000

Small-angle X-ray scattering from RNA, proteins, and protein complexes

artículo científico publicado en 2007

Small-angle x-ray scattering investigation of the solution structure of troponin C.

artículo científico publicado en 1988

Small-angle x-ray scattering studies of the iron-molybdenum cofactor from Azotobacter vinelandii nitrogenase.

artículo científico publicado en 1993

Solution structural studies and low-resolution model of the Schizosaccharomyces pombe sap1 protein

artículo científico publicado en 2000

Stimulation of insulin fibrillation by urea-induced intermediates

artículo científico publicado en 2004

Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae

artículo científico publicado en 2006

Studies of the Structure of Matter with Photons from an X-ray Free-Electron Laser

artículo científico publicado en 1996

Technological manpower

artículo científico publicado en 1982

The Fastest Global Events in RNA Folding: Electrostatic Relaxation and Tertiary Collapse of the Tetrahymena Ribozyme

artículo científico publicado en 2003

The birth of the DS lineshape

artículo científico publicado en 2016

The complete VS ribozyme in solution studied by small-angle X-ray scattering

artículo científico publicado en 2008

The insulator-metal transition

article published in 1969

The ligand-free state of the TPP riboswitch: a partially folded RNA structure

artículo científico publicado en 2009

The radius of gyration of an apomyoglobin folding intermediate

artículo científico publicado en 1995

Theory of photoemission and inverse photoemission in the presence of strong correlations: Application to high-Tc materials

artículo científico publicado en 1990

Thermodynamics of monolayer formation on an impure substrate: Random-field Ising-model approach

artículo científico publicado en 1985

Time-resolved X-ray scattering and RNA folding

scientific article published on 17 November 2009

Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins

artículo científico publicado en 2002

Toward the mechanism of dynamical couplings and translocation in hepatitis C virus NS3 helicase using elastic network model

artículo científico publicado en 2007

Transient dimer in the refolding kinetics of cytochrome c characterized by small-angle X-ray scattering

artículo científico publicado en 1999

Tuning micelle dimensions and properties with binary surfactant mixtures

artículo científico publicado en 2014

Understanding nucleic acid-ion interactions

artículo científico publicado en 2014

Unusual compactness of a polyproline type II structure

artículo científico publicado en 2005

Use of few-domain classical models to study mode locking in charge-density-wave systems

artículo científico publicado en 1987

Use of general potentials in multiple-scattering theory

scientific article published on 01 December 1986

Use of small angle X-ray scattering (SAXS) to characterize conformational states of functional RNAs

artículo científico publicado en 2009

White lines in L-edge x-ray absorption spectra and their implications for anomalous diffraction studies of biological materials

artículo científico publicado en 1980

X-ray Ca K edge of calcium adenosine triphosphate system and of simple Ca compunds

artículo científico publicado en 1978

X-ray absorption spectroscopy using synchrotron radiation for structural investigation of organometallic molecules of biological interest ⬇️

artículo científico publicado el 1 de junio de 1975

X-ray photoemission spectroscopy

artículo científico publicado en 1974

Zn(2+)-mediated structure formation and compaction of the "natively unfolded" human prothymosin alpha.

artículo científico publicado en 2000

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