Lista de obras -

A close relationship between Cercozoa and Foraminifera supported by phylogenetic analyses based on combined amino acid sequences of three cytoskeletal proteins (actin, alpha-tubulin, and beta-tubulin)

scientific article published on 14 October 2005

A deviant genetic code in the green alga-derived plastid in the dinoflagellate Lepidodinium chlorophorum ⬇️

artículo científico publicado el 22 de abril de 2011

A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan.

artículo científico publicado en 1997

A non-photosynthetic diatom reveals early steps of reductive evolution in plastids

artículo científico publicado en 2017

A novel spliceosome-mediated trans-splicing can change our view on genome complexity of the divergent eukaryote Giardia intestinalis.

artículo científico publicado en 2011

A wide diversity of previously undetected free-living relatives of diplomonads isolated from marine/saline habitats.

artículo científico publicado en 2010

Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences.

artículo científico publicado en 1997

An intronic open reading frame was released from one of group II introns in the mitochondrial genome of the haptophyte Chrysochromulina sp. NIES-1333.

artículo científico publicado en 2014

Assessing functional divergence in EF-1alpha and its paralogs in eukaryotes and archaebacteria

artículo científico publicado en 2003

Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions.

artículo científico publicado en 2007

Capsaspora owczarzaki is an independent opisthokont lineage.

artículo científico publicado en 2004

Centrohelida is still searching for a phylogenetic home: analyses of seven Raphidiophrys contractilis genes

artículo científico publicado en 2007

Cercozoa comprises both EF-1α-containing and EFL-containing members

scientific article published on 10 November 2010

Characterization of spliced leader trans-splicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transfer

scientific article published on 19 July 2018

Class I release factors in ciliates with variant genetic codes

artículo científico publicado en 2001

Comparative Plastid Genomics of Cryptomonas Species Reveals Fine-Scale Genomic Responses to Loss of Photosynthesis

artículo científico publicado en 2020

Complete genome of a nonphotosynthetic cyanobacterium in a diatom reveals recent adaptations to an intracellular lifestyle

artículo científico publicado en 2014

Convergence and constraint in eukaryotic release factor 1 (eRF1) domain 1: the evolution of stop codon specificity.

artículo científico publicado en 2002

Covarion shifts cause a long-branch attraction artifact that unites microsporidia and archaebacteria in EF-1alpha phylogenies.

artículo científico publicado en 2004

Cryptic diversity of free-living parabasalids, Pseudotrichomonas keilini and Lacusteria cypriaca n. g., n. sp., as inferred from small subunit rDNA sequences.

artículo científico publicado en 2010

Dinoflagellates with relic endosymbiont nuclei as models for elucidating organellogenesis

artículo científico publicado en 2020

Direct phylogenetic evidence for lateral transfer of elongation factor-like gene

artículo científico publicado en 2008

Directionally evolving genetic code: the UGA codon from stop to tryptophan in mitochondria.

artículo científico publicado en 1998

Distinctive origins of group I introns found in the COXI genes of three gree algae.

artículo científico publicado en 1998

Eukaryotic origin of glyceraldehyde-3-phosphate dehydrogenase genes in Clostridium thermocellum and Clostridium cellulolyticum genomes and putative fates of the exogenous gene in the subsequent genome evolution.

artículo científico publicado en 2008

Evolution of Elongation Factor‐Like (EFL) Protein in Rhizaria is Revised by Radiolarian EFL Gene Sequences ⬇️

artículo científico publicado el 1 de julio de 2012

Evolution of the eukaryotic translation termination system: origins of release factors

artículo científico publicado en 2000

Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes

artículo científico publicado en 2009

Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase.

artículo científico publicado en 2018

Fates of Evolutionarily Distinct, Plastid-type Glyceraldehyde 3-phosphate Dehydrogenase Genes in Kareniacean Dinoflagellates

artículo científico publicado en 2018

Fragmentation of mitochondrial large subunit rRNA in the dinoflagellate Alexandrium catenella and the evolution of rRNA structure in alveolate mitochondria.

artículo científico publicado en 2007

Gene content evolution in Discobid mitochondria deduced from the phylogenetic position and complete mitochondrial genome of Tsukubamonas globosa.

artículo científico publicado en 2014

Genome sequencing reveals metabolic and cellular interdependence in an amoeba-kinetoplastid symbiosis.

artículo científico publicado en 2017

Genomic divergence within non-photosynthetic cyanobacterial endosymbionts in rhopalodiacean diatoms

artículo científico publicado en 2017

Global Kinetoplastea phylogeny inferred from a large-scale multigene alignment including parasitic species for better understanding transitions from a free-living to a parasitic lifestyle.

artículo científico publicado en 2017

Green-colored Plastids in the Dinoflagellate Genus Lepidodinium are of Core Chlorophyte Origin ⬇️

artículo científico publicado el 15 de septiembre de 2010

Horizontally-acquired genetic elements in the mitochondrial genome of a centrohelid Marophrys sp. SRT127

artículo científico publicado en 2019

Identification of a bacteria-like ferrochelatase in Strongyloides venezuelensis, an animal parasitic nematode.

artículo científico publicado en 2013

In Silico Structural Modeling and Analysis of Elongation Factor-1 Alpha and Elongation Factor-like Protein

scientific article published on 23 April 2019

Inventory and Evolution of Mitochondrion-localized Family A DNA Polymerases in Euglenozoa

scientific article published on 01 April 2020

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

artículo científico publicado en 2009

Lateral Transfer of an EF-1α Gene

article

Metabolic Capacity of Mitochondrion-related Organelles in the Free-living Anaerobic Stramenopile Cantina marsupialis.

artículo científico publicado en 2015

Mitochondrial Genome of Palpitomonas bilix: Derived Genome Structure and Ancestral System for Cytochrome c Maturation

artículo científico publicado en 2016

Morphological Identities of Two Different Marine Stramenopile Environmental Sequence Clades: Bicosoeca kenaiensis (Hilliard, 1971) and Cantina marsupialis (Larsen and Patterson, 1990) gen. nov., comb. nov.

artículo científico publicado en 2015

Multigene Phylogenies of Diverse Carpediemonas-like Organisms Identify the Closest Relatives of ‘Amitochondriate’ Diplomonads and Retortamonads

artículo científico publicado en 2012

Multiple conversion between the genes encoding bacterial class-I release factors

artículo científico publicado en 2015

On inconsistency of the neighbor-joining, least squares, and minimum evolution estimation when substitution processes are incorrectly modeled.

artículo científico publicado en 2004

Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes.

artículo científico publicado en 2017

Origins of plastids and glyceraldehyde-3-phosphate dehydrogenase genes in the green-colored dinoflagellate Lepidodinium chlorophorum.

artículo científico publicado en 2007

Palpitomonas bilix gen. et sp. nov.: A novel deep-branching heterotroph possibly related to Archaeplastida or Hacrobia.

artículo científico publicado en 2010

Patterns in evolutionary origins of heme, chlorophyll and isopentenyl diphosphate biosynthetic pathways suggest non-photosynthetic periods prior to plastid replacements in dinoflagellates

artículo científico publicado en 2018

Phylogenetic analysis of diatom coxI genes and implications of a fluctuating GC content on mitochondrial genetic code evolution

artículo científico publicado en 2000

Phylogenetic estimation under codon models can be biased by codon usage heterogeneity

artículo científico publicado en 2006

Phylogenomics Places Orphan Protistan Lineages in a Novel Eukaryotic Super-Group

artículo científico publicado en 2018

Phylogeny of Asian primate malaria parasites inferred from apicoplast genome-encoded genes with special emphasis on the positions of Plasmodium vivax and P. fragile.

artículo científico publicado en 2010

Plasticity of the domain structure in FlgJ, a bacterial protein involved in flagellar rod formation.

artículo científico publicado en 2006

Prasinoxanthin is absent in the green-colored dinoflagellate Lepidodinium chlorophorum strain NIES-1868: pigment composition and 18S rRNA phylogeny.

artículo científico publicado en 2012

Proposal of a Twin Arginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes. [Corrected].

artículo científico publicado en 2015

Putative genome features of relic green alga-derived nuclei in dinoflagellates and future perspectives as model organisms

artículo científico publicado en 2020

Rooting for the root of elongation factor-like protein phylogeny.

artículo científico publicado en 2010

Secondary loss of a cis-spliced intron during the divergence of Giardia intestinalis assemblages.

artículo científico publicado en 2014

Separate origins of group I introns in two mitochondrial genes of the katablepharid Leucocryptos marina

artículo científico publicado en 2012

Single-cell genomics unveiled a cryptic cyanobacterial lineage with a worldwide distribution hidden by a dinoflagellate host

scientific article published on 24 June 2019

Split introns in the genome of Giardia intestinalis are excised by spliceosome-mediated trans-splicing.

artículo científico publicado en 2011

Testing for differences in rates-across-sites distributions in phylogenetic subtrees.

artículo científico publicado en 2002

The closest lineage of Archaeplastida is revealed by phylogenomics analyses that include Microheliella maris

article published on April 23, 2022

The draft genome of Kipferlia bialata reveals reductive genome evolution in fornicate parasites.

artículo científico publicado en 2018

Translation of synonymous codons in family boxes by Mycoplasma capricolum tRNAs with unmodified uridine or adenosine at the first anticodon position

scientific article published on 01 August 1995

Tsukubamonas globosa n. gen., n. sp., a novel excavate flagellate possibly holding a key for the early evolution in "Discoba".

artículo científico publicado en 2011

Ungulate malaria parasites

artículo científico publicado en 2016

Use of a deviant mitochondrial genetic code in yellow-green algae as a landmark for segregating members within the phylum ⬇️

artículo científico publicado el 1 de agosto de 1997

Lista de obras de

A close relationship between Cercozoa and Foraminifera supported by phylogenetic analyses based on combined amino acid sequences of three cytoskeletal proteins (actin, alpha-tubulin, and beta-tubulin)

A deviant genetic code in the green alga-derived plastid in the dinoflagellate Lepidodinium chlorophorum ⬇️

A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan.

A non-photosynthetic diatom reveals early steps of reductive evolution in plastids

A novel spliceosome-mediated trans-splicing can change our view on genome complexity of the divergent eukaryote Giardia intestinalis.

A wide diversity of previously undetected free-living relatives of diplomonads isolated from marine/saline habitats.

Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences.

An intronic open reading frame was released from one of group II introns in the mitochondrial genome of the haptophyte Chrysochromulina sp. NIES-1333.

Assessing functional divergence in EF-1alpha and its paralogs in eukaryotes and archaebacteria

Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions.

Capsaspora owczarzaki is an independent opisthokont lineage.

Centrohelida is still searching for a phylogenetic home: analyses of seven Raphidiophrys contractilis genes

Cercozoa comprises both EF-1α-containing and EFL-containing members

Characterization of spliced leader trans-splicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transfer

Class I release factors in ciliates with variant genetic codes

Comparative Plastid Genomics of Cryptomonas Species Reveals Fine-Scale Genomic Responses to Loss of Photosynthesis

Complete genome of a nonphotosynthetic cyanobacterium in a diatom reveals recent adaptations to an intracellular lifestyle

Convergence and constraint in eukaryotic release factor 1 (eRF1) domain 1: the evolution of stop codon specificity.

Covarion shifts cause a long-branch attraction artifact that unites microsporidia and archaebacteria in EF-1alpha phylogenies.

Cryptic diversity of free-living parabasalids, Pseudotrichomonas keilini and Lacusteria cypriaca n. g., n. sp., as inferred from small subunit rDNA sequences.

Dinoflagellates with relic endosymbiont nuclei as models for elucidating organellogenesis

Direct phylogenetic evidence for lateral transfer of elongation factor-like gene

Directionally evolving genetic code: the UGA codon from stop to tryptophan in mitochondria.

Distinctive origins of group I introns found in the COXI genes of three gree algae.

Eukaryotic origin of glyceraldehyde-3-phosphate dehydrogenase genes in Clostridium thermocellum and Clostridium cellulolyticum genomes and putative fates of the exogenous gene in the subsequent genome evolution.

Evolution of Elongation Factor‐Like (EFL) Protein in Rhizaria is Revised by Radiolarian EFL Gene Sequences ⬇️

Evolution of the eukaryotic translation termination system: origins of release factors

Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes

Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase.

Fates of Evolutionarily Distinct, Plastid-type Glyceraldehyde 3-phosphate Dehydrogenase Genes in Kareniacean Dinoflagellates

Fragmentation of mitochondrial large subunit rRNA in the dinoflagellate Alexandrium catenella and the evolution of rRNA structure in alveolate mitochondria.

Gene content evolution in Discobid mitochondria deduced from the phylogenetic position and complete mitochondrial genome of Tsukubamonas globosa.

Genome sequencing reveals metabolic and cellular interdependence in an amoeba-kinetoplastid symbiosis.

Genomic divergence within non-photosynthetic cyanobacterial endosymbionts in rhopalodiacean diatoms

Global Kinetoplastea phylogeny inferred from a large-scale multigene alignment including parasitic species for better understanding transitions from a free-living to a parasitic lifestyle.

Green-colored Plastids in the Dinoflagellate Genus Lepidodinium are of Core Chlorophyte Origin ⬇️

Horizontally-acquired genetic elements in the mitochondrial genome of a centrohelid Marophrys sp. SRT127

Identification of a bacteria-like ferrochelatase in Strongyloides venezuelensis, an animal parasitic nematode.

In Silico Structural Modeling and Analysis of Elongation Factor-1 Alpha and Elongation Factor-like Protein

Inventory and Evolution of Mitochondrion-localized Family A DNA Polymerases in Euglenozoa

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

Lateral Transfer of an EF-1α Gene

Metabolic Capacity of Mitochondrion-related Organelles in the Free-living Anaerobic Stramenopile Cantina marsupialis.

Mitochondrial Genome of Palpitomonas bilix: Derived Genome Structure and Ancestral System for Cytochrome c Maturation

Morphological Identities of Two Different Marine Stramenopile Environmental Sequence Clades: Bicosoeca kenaiensis (Hilliard, 1971) and Cantina marsupialis (Larsen and Patterson, 1990) gen. nov., comb. nov.

Multigene Phylogenies of Diverse Carpediemonas-like Organisms Identify the Closest Relatives of ‘Amitochondriate’ Diplomonads and Retortamonads

Multiple conversion between the genes encoding bacterial class-I release factors

On inconsistency of the neighbor-joining, least squares, and minimum evolution estimation when substitution processes are incorrectly modeled.

Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes.

Origins of plastids and glyceraldehyde-3-phosphate dehydrogenase genes in the green-colored dinoflagellate Lepidodinium chlorophorum.

Palpitomonas bilix gen. et sp. nov.: A novel deep-branching heterotroph possibly related to Archaeplastida or Hacrobia.

Patterns in evolutionary origins of heme, chlorophyll and isopentenyl diphosphate biosynthetic pathways suggest non-photosynthetic periods prior to plastid replacements in dinoflagellates

Phylogenetic analysis of diatom coxI genes and implications of a fluctuating GC content on mitochondrial genetic code evolution

Phylogenetic estimation under codon models can be biased by codon usage heterogeneity

Phylogenomics Places Orphan Protistan Lineages in a Novel Eukaryotic Super-Group

Phylogeny of Asian primate malaria parasites inferred from apicoplast genome-encoded genes with special emphasis on the positions of Plasmodium vivax and P. fragile.

Plasticity of the domain structure in FlgJ, a bacterial protein involved in flagellar rod formation.

Prasinoxanthin is absent in the green-colored dinoflagellate Lepidodinium chlorophorum strain NIES-1868: pigment composition and 18S rRNA phylogeny.

Proposal of a Twin Arginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes. [Corrected].

Putative genome features of relic green alga-derived nuclei in dinoflagellates and future perspectives as model organisms

Rooting for the root of elongation factor-like protein phylogeny.

Secondary loss of a cis-spliced intron during the divergence of Giardia intestinalis assemblages.

Separate origins of group I introns in two mitochondrial genes of the katablepharid Leucocryptos marina

Single-cell genomics unveiled a cryptic cyanobacterial lineage with a worldwide distribution hidden by a dinoflagellate host

Split introns in the genome of Giardia intestinalis are excised by spliceosome-mediated trans-splicing.

Testing for differences in rates-across-sites distributions in phylogenetic subtrees.

The closest lineage of Archaeplastida is revealed by phylogenomics analyses that include Microheliella maris

The draft genome of Kipferlia bialata reveals reductive genome evolution in fornicate parasites.

Translation of synonymous codons in family boxes by Mycoplasma capricolum tRNAs with unmodified uridine or adenosine at the first anticodon position

Tsukubamonas globosa n. gen., n. sp., a novel excavate flagellate possibly holding a key for the early evolution in "Discoba".

Ungulate malaria parasites

Use of a deviant mitochondrial genetic code in yellow-green algae as a landmark for segregating members within the phylum ⬇️