Lista de obras -

A CART-based approach to discover emerging patterns in microarray data

artículo científico publicado en 2003

A measure of the impact of CV incompleteness on prediction error estimation with application to PCA and normalization.

artículo científico publicado en 2015

A plea for neutral comparison studies in computational sciences

artículo científico publicado en 2013

AUC-RF: a new strategy for genomic profiling with random forest

artículo científico publicado en 2011

Added predictive value of high-throughput molecular data to clinical data and its validation

artículo científico publicado en 2011

An AUC-based permutation variable importance measure for random forests

artículo científico publicado en 2013

Application of Microarray Analysis on Computer Cluster and Cloud Platforms ⬇️

artículo científico publicado el 27 de noviembre de 2012

Assessment of predictive performance in incomplete data by combining internal validation and multiple imputation

artículo científico publicado en 2016

Bias in random forest variable importance measures: illustrations, sources and a solution

artículo científico publicado en 2007

Breath isoprene concentrations in persons undergoing general anesthesia and in healthy volunteers

artículo científico publicado en 2012

Categorical variables with many categories are preferentially selected in bootstrap-based model selection procedures for multivariable regression models

artículo científico publicado en 2016

Centrosome abnormalities in head and neck squamous cell carcinoma (HNSCC).

artículo científico publicado en 2009

Combining location-and-scale batch effect adjustment with data cleaning by latent factor adjustment

artículo científico publicado en 2016

Conditional variable importance for random forests

artículo científico publicado en 2008

Correcting the optimal resampling-based error rate by estimating the error rate of wrapper algorithms

artículo científico publicado en 2013

Cross-study validation for the assessment of prediction algorithms

artículo científico publicado en 2014

Differential expression of the chemokines GRO-2, GRO-3, and interleukin-8 in colon cancer and their impact on metastatic disease and survival

artículo científico publicado en 2010

Effects of aprotinin dosage on renal function: an analysis of 8,548 cardiac surgical patients treated with different dosages of aprotinin

artículo científico publicado en 2008

Erratum to: Assessment of predictive performance in incomplete data by combining internal validation and multiple imputation

artículo científico publicado en 2016

Essential guidelines for computational method benchmarking.

artículo científico publicado en 2019

Exhaled breath volatile organic and inorganic compound composition in end-stage renal disease

artículo científico publicado en 2016

Gender mismatch in allograft aortic valve surgery

artículo científico publicado en 2015

Gram-negative and -positive bacteria differentiation in blood culture samples by headspace volatile compound analysis

artículo científico publicado en 2016

Guest Editorial-Special Collection Topic: Statistical Systems Theory in Cancer Modeling, Diagnosis, and Therapy

artículo científico publicado en 2018

Homografts in aortic position: does blood group incompatibility have an impact on patient outcomes?

artículo científico publicado en 2013

IPF-LASSO: Integrative L1-Penalized Regression with Penalty Factors for Prediction Based on Multi-Omics Data.

artículo científico publicado en 2017

Improving cross-study prediction through addon batch effect adjustment or addon normalization

artículo científico publicado en 2016

Independent validation of a new reirradiation risk score (RRRS) for glioma patients predicting post-recurrence survival: A multicenter DKTK/ROG analysis

artículo científico publicado en 2018

Influence of diatoms on copepod reproduction. II. Uncorrelated effects of diatom-derived α,β,γ,δ-unsaturated aldehydes and polyunsaturated fatty acids on Calanus helgolandicus in the field

Inhibition of radiation induced migration of human head and neck squamous cell carcinoma cells by blocking of EGF receptor pathways

artículo científico publicado en 2011

Interleukin-22 is elevated in lavage from patients with lung cancer and other pulmonary diseases

artículo científico publicado en 2016

Introduction to statistical simulations in health research

artículo científico publicado en 2020

Investigating the prediction ability of survival models based on both clinical and omics data: two case studies

artículo científico publicado en 2014

Iterative reconstruction of high-dimensional Gaussian Graphical Models based on a new method to estimate partial correlations under constraints

artículo científico publicado en 2013

Letter to the Editor: On the term 'interaction' and related phrases in the literature on Random Forests

artículo científico publicado en 2014

Live music reduces stress levels in very low-birthweight infants.

artículo científico publicado en 2015

Machine learning versus statistical modeling.

artículo científico publicado en 2014

Making complex prediction rules applicable for readers: Current practice in random forest literature and recommendations

scientific article published on 01 August 2018

Methylation of tumor-related genes in neoadjuvant-treated gastric cancer: relation to therapy response and clinicopathologic and molecular features

artículo científico publicado en 2007

Methylene Blue halves the long-term recurrence rate in acute pilonidal sinus disease

artículo científico publicado en 2007

Microarray-based classification and clinical predictors: on combined classifiers and additional predictive value

artículo científico publicado en 2008

Mid-term outcomes of patients with PCI prior to CABG in comparison to patients with primary CABG.

artículo científico publicado en 2010

Multiple testing for SNP-SNP interactions

artículo científico publicado en 2007

On representative and illustrative comparisons with real data in bioinformatics: response to the letter to the editor by Smith et al ⬇️

artículo científico publicado el 8 de agosto de 2013

On stability issues in deriving multivariable regression models

artículo científico publicado en 2014

On the necessity and design of studies comparing statistical methods

artículo científico publicado en 2017

Optimal classifier selection and negative bias in error rate estimation: an empirical study on high-dimensional prediction

artículo científico publicado en 2009

Over-optimism in bioinformatics research

artículo científico publicado en 2009

Over-optimism in bioinformatics: an illustration

artículo científico publicado en 2010

Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics

Over‐optimism in benchmark studies and the multiplicity of design and analysis options when interpreting their results

artículo científico publicado en 2021

PLS dimension reduction for classification with microarray data

artículo científico publicado en 2004

Partial least squares: a versatile tool for the analysis of high-dimensional genomic data

artículo científico publicado en 2006

Pitfalls of hypothesis tests and model selection on bootstrap samples: Causes and consequences in biometrical applications

artículo científico publicado en 2015

Predicting transcription factor activities from combined analysis of microarray and ChIP data: a partial least squares approach

artículo científico publicado en 2005

Publication Bias in Methodological Computational Research

artículo científico publicado en 2015

Random forest Gini importance favours SNPs with large minor allele frequency: impact, sources and recommendations

artículo científico publicado en 2011

Random forest versus logistic regression: a large-scale benchmark experiment

scholarly article by Raphael Couronné published in July 2018

Reader's reaction to "Dimension reduction for classification with gene expression microarray data" by Dai et al (2006).

artículo científico publicado en 2006

Regularized estimation of large-scale gene association networks using graphical Gaussian models

artículo científico publicado en 2009

Sampling uncertainty versus method uncertainty: A general framework with applications to omics biomarker selection

scientific article published on 17 May 2019

Stability and aggregation of ranked gene lists

artículo científico publicado en 2009

Stability investigations of multivariable regression models derived from low- and high-dimensional data

artículo científico publicado en 2011

Statistical learning approaches in the genetic epidemiology of complex diseases

artículo científico publicado en 2019

Statisticians, roll up your sleeves! There's a crisis to be solved

artículo científico publicado en 2021

Subsampling versus bootstrapping in resampling-based model selection for multivariable regression

artículo científico publicado en 2015

Surgery for asymptomatic pilonidal sinus disease

artículo científico publicado en 2008

Ten simple rules for reducing overoptimistic reporting in methodological computational research

artículo científico publicado en 2015

Testing the additional predictive value of high-dimensional molecular data

artículo científico publicado en 2010

Time and rate of sinus formation in pilonidal sinus disease

artículo científico publicado en 2008

Towards evidence-based computational statistics: lessons from clinical research on the role and design of real-data benchmark studies

artículo científico publicado en 2017

Unbiased split selection for classification trees based on the Gini Index

Use of pretransformation to cope with extreme values in important candidate features ⬇️

artículo científico publicado el 30 de mayo de 2011

What is the "normal" fetal heart rate?

artículo científico publicado en 2013

WilcoxCV: an R package for fast variable selection in cross-validation

artículo científico publicado en 2007

Lista de obras de

A CART-based approach to discover emerging patterns in microarray data

A measure of the impact of CV incompleteness on prediction error estimation with application to PCA and normalization.

A plea for neutral comparison studies in computational sciences

AUC-RF: a new strategy for genomic profiling with random forest

Added predictive value of high-throughput molecular data to clinical data and its validation

An AUC-based permutation variable importance measure for random forests

Application of Microarray Analysis on Computer Cluster and Cloud Platforms ⬇️

Assessment of predictive performance in incomplete data by combining internal validation and multiple imputation

Bias in random forest variable importance measures: illustrations, sources and a solution

Breath isoprene concentrations in persons undergoing general anesthesia and in healthy volunteers

Categorical variables with many categories are preferentially selected in bootstrap-based model selection procedures for multivariable regression models

Centrosome abnormalities in head and neck squamous cell carcinoma (HNSCC).

Combining location-and-scale batch effect adjustment with data cleaning by latent factor adjustment

Conditional variable importance for random forests

Correcting the optimal resampling-based error rate by estimating the error rate of wrapper algorithms

Cross-study validation for the assessment of prediction algorithms

Differential expression of the chemokines GRO-2, GRO-3, and interleukin-8 in colon cancer and their impact on metastatic disease and survival

Effects of aprotinin dosage on renal function: an analysis of 8,548 cardiac surgical patients treated with different dosages of aprotinin

Erratum to: Assessment of predictive performance in incomplete data by combining internal validation and multiple imputation

Essential guidelines for computational method benchmarking.

Exhaled breath volatile organic and inorganic compound composition in end-stage renal disease

Gender mismatch in allograft aortic valve surgery

Gram-negative and -positive bacteria differentiation in blood culture samples by headspace volatile compound analysis

Guest Editorial-Special Collection Topic: Statistical Systems Theory in Cancer Modeling, Diagnosis, and Therapy

Homografts in aortic position: does blood group incompatibility have an impact on patient outcomes?

IPF-LASSO: Integrative L1-Penalized Regression with Penalty Factors for Prediction Based on Multi-Omics Data.

Improving cross-study prediction through addon batch effect adjustment or addon normalization

Independent validation of a new reirradiation risk score (RRRS) for glioma patients predicting post-recurrence survival: A multicenter DKTK/ROG analysis

Influence of diatoms on copepod reproduction. II. Uncorrelated effects of diatom-derived α,β,γ,δ-unsaturated aldehydes and polyunsaturated fatty acids on Calanus helgolandicus in the field

Inhibition of radiation induced migration of human head and neck squamous cell carcinoma cells by blocking of EGF receptor pathways

Interleukin-22 is elevated in lavage from patients with lung cancer and other pulmonary diseases

Introduction to statistical simulations in health research

Investigating the prediction ability of survival models based on both clinical and omics data: two case studies

Iterative reconstruction of high-dimensional Gaussian Graphical Models based on a new method to estimate partial correlations under constraints

Letter to the Editor: On the term 'interaction' and related phrases in the literature on Random Forests

Live music reduces stress levels in very low-birthweight infants.

Machine learning versus statistical modeling.

Making complex prediction rules applicable for readers: Current practice in random forest literature and recommendations

Methylation of tumor-related genes in neoadjuvant-treated gastric cancer: relation to therapy response and clinicopathologic and molecular features

Methylene Blue halves the long-term recurrence rate in acute pilonidal sinus disease

Microarray-based classification and clinical predictors: on combined classifiers and additional predictive value

Mid-term outcomes of patients with PCI prior to CABG in comparison to patients with primary CABG.

Multiple testing for SNP-SNP interactions

On representative and illustrative comparisons with real data in bioinformatics: response to the letter to the editor by Smith et al ⬇️

On stability issues in deriving multivariable regression models

On the necessity and design of studies comparing statistical methods

Optimal classifier selection and negative bias in error rate estimation: an empirical study on high-dimensional prediction

Over-optimism in bioinformatics research

Over-optimism in bioinformatics: an illustration

Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics

Over‐optimism in benchmark studies and the multiplicity of design and analysis options when interpreting their results

PLS dimension reduction for classification with microarray data

Partial least squares: a versatile tool for the analysis of high-dimensional genomic data

Pitfalls of hypothesis tests and model selection on bootstrap samples: Causes and consequences in biometrical applications

Predicting transcription factor activities from combined analysis of microarray and ChIP data: a partial least squares approach

Publication Bias in Methodological Computational Research

Random forest Gini importance favours SNPs with large minor allele frequency: impact, sources and recommendations

Random forest versus logistic regression: a large-scale benchmark experiment

Reader's reaction to "Dimension reduction for classification with gene expression microarray data" by Dai et al (2006).

Regularized estimation of large-scale gene association networks using graphical Gaussian models

Sampling uncertainty versus method uncertainty: A general framework with applications to omics biomarker selection

Stability and aggregation of ranked gene lists

Stability investigations of multivariable regression models derived from low- and high-dimensional data

Statistical learning approaches in the genetic epidemiology of complex diseases

Statisticians, roll up your sleeves! There's a crisis to be solved

Subsampling versus bootstrapping in resampling-based model selection for multivariable regression

Surgery for asymptomatic pilonidal sinus disease

Ten simple rules for reducing overoptimistic reporting in methodological computational research

Testing the additional predictive value of high-dimensional molecular data

Time and rate of sinus formation in pilonidal sinus disease

Towards evidence-based computational statistics: lessons from clinical research on the role and design of real-data benchmark studies

Unbiased split selection for classification trees based on the Gini Index

Use of pretransformation to cope with extreme values in important candidate features ⬇️

What is the "normal" fetal heart rate?

WilcoxCV: an R package for fast variable selection in cross-validation