Lista de obras -

2017 Outbreak of Ebola Virus Disease in Northern Democratic Republic of Congo

artículo científico publicado en 2020

2HAPI: a microarray data analysis system.

artículo científico publicado en 2003

A Lactococcal Phage Protein Promotes Viral Propagation and Alters the Host Proteomic Response During Infection

artículo científico publicado en 2020

A general framework for analyzing data from two short time-series microarray experiments.

artículo científico publicado en 2011

A new Microviridae phage isolated from a failed biotechnological process driven by Escherichia coli.

artículo científico publicado en 2014

A new perspective on V3 phenotype prediction.

artículo científico publicado en 2003

A new serotyping method of S. pneumoniae using an automated microarray-based assay

artículo científico publicado en 2011

Antiproliferative effect of retinoid compounds on Kaposi's sarcoma cells

artículo científico publicado en 1994

Antiproliferative effects of enediynes on AIDS-derived Kaposi's sarcoma cells.

artículo científico publicado en 1994

Bendamustine (Treanda) displays a distinct pattern of cytotoxicity and unique mechanistic features compared with other alkylating agents.

artículo científico publicado en 2008

Characterization of cytokine gene expression associated with noninfectious human immunodeficiency virus retinopathy in human autopsy eyes.

artículo científico publicado en 2010

Characterization of frataxin gene network in Friedreich's ataxia fibroblasts using the RNA-Seq technique

artículo científico publicado en 2016

Clostridium difficile: Investigating Transmission Patterns Between Infected and Colonized Patients Using Whole Genome Sequencing ⬇️

article

Clostridium difficile: Investigating Transmission Patterns Between Symptomatic and Asymptomatic Patients Using Whole Genome Sequencing.

artículo científico publicado en 2017

Communities of Phytoplankton Viruses across the Transition Zone of the St. Lawrence Estuary

artículo científico publicado en 2018

Comparative gene expression analysis of blood and brain provides concurrent validation of SELENBP1 up-regulation in schizophrenia

artículo científico publicado en 2005

Comparison of Automated Microarray Detection with Real-Time PCR Assays for Detection of Respiratory Viruses in Specimens Obtained from Children

artículo científico publicado en 2010

Comparison of risk factors for human metapneumovirus and respiratory syncytial virus disease severity in young children.

artículo científico publicado en 2012

Complete Genome Sequence of Escherichia coli Siphophage BRET

artículo científico publicado en 2019

Complete Genome Sequence of Streptococcus thermophilus SMQ-301, a Model Strain for Phage-Host Interactions

artículo científico publicado en 2015

Correlation between Clostridium difficile bacterial load, commercial real-time PCR cycle thresholds, and results of diagnostic tests based on enzyme immunoassay and cell culture cytotoxicity assay.

artículo científico publicado en 2013

Culture-enriched human gut microbiomes reveal core and accessory resistance genes

article

Cutting edge: a novel viral TNF receptor superfamily member in virulent strains of human cytomegalovirus.

artículo científico publicado en 1999

Differential expression profiles of apoptosis-affecting genes in HIV-infected cell lines and patient T cells

scientific article published on 01 February 1999

Diminished somatostatin gene expression in individuals with HIV and major depressive disorder.

artículo científico publicado en 2006

Draft Genome Sequence of Criibacterium bergeronii gen. nov., sp. nov., Strain CCRI-22567T, Isolated from a Vaginal Sample from a Woman with Bacterial Vaginosis

artículo científico publicado en 2016

Draft Genome Sequence of Romboutsia maritimum sp. nov. Strain CCRI-22766T, Isolated from Coastal Estuarine Mud.

artículo científico publicado en 2017

Draft Genome Sequence of Romboutsia weinsteinii sp. nov. Strain CCRI-19649T Isolated from Surface Water.

artículo científico publicado en 2017

Draft Genome Sequence of a Sporulating and Motile Strain of Lachnotalea glycerini Isolated from Water in Québec City, Canada

artículo científico publicado en 2017

Early modifications of host cell gene expression induced by HIV-1 ⬇️

artículo científico publicado el 16 de abril de 1998

Effect of micromechanical stimulations on osteoblasts: development of a device simulating the mechanical situation at the bone-implant interface

artículo científico publicado en 2003

Effects of antiretroviral drugs on human immunodeficiency virus type 1-induced CD4(+) T-cell death.

artículo científico publicado en 2002

Endonucleases: tools to correct the dystrophin gene.

artículo científico publicado en 2011

Enhancement of HIV-1-induced syncytium formation in T cells by the tyrosyl kinase p56lck.

artículo científico publicado en 1997

Epitope mapping of the 2009 pandemic and the A/Brisbane/59/2007 seasonal (H1N1) influenza virus haemagglutinins using mAbs and escape mutants.

artículo científico publicado en 2014

Evolution of oseltamivir resistance mutations in Influenza A(H1N1) and A(H3N2) viruses during selection in experimentally infected mice.

artículo científico publicado en 2014

Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data.

artículo científico publicado en 2011

First Complete Genome Sequence of Staphylococcus xylosus, a Meat Starter Culture and a Host to Propagate Staphylococcus aureus Phages.

artículo científico publicado en 2014

Gene amplification and point mutations in pyrimidine metabolic genes in 5-fluorouracil resistant Leishmania infantum

artículo científico publicado en 2013

Gene expression analysis of osteoblastic cells contacted by orthopedic implant particles.

artículo científico publicado en 2002

Gene expression profiling and molecular characterization of antimony resistance in Leishmania amazonensis

artículo científico publicado en 2011

Genetic basis of hypersusceptibility to protease inhibitors and low replicative capacity of human immunodeficiency virus type 1 strains in primary infection

artículo científico publicado en 2004

Genome-Wide Screen for Haploinsufficient Cell Size Genes in the Opportunistic Yeast Candida albicans

artículo científico publicado en 2016

Genome-wide stochastic adaptive DNA amplification at direct and inverted DNA repeats in the parasite Leishmania

artículo científico publicado en 2014

Genomic characterization of a large outbreak of Legionella pneumophila serogroup 1 strains in Quebec City, 2012

artículo científico publicado en 2014

Gln-tRNAGln synthesis in a dynamic transamidosome from Helicobacter pylori, where GluRS2 hydrolyzes excess Glu-tRNAGln

artículo científico publicado en 2011

Global Mapping of the Macrophage-HIV-1 Transcriptome Reveals that Productive Infection Induces Remodeling of Host Cell DNA and Chromatin

artículo científico publicado en 2017

HIV Downregulates Interferon-Stimulated Genes in Primary Macrophages ⬇️

artículo científico publicado el 31 de diciembre de 2012

HIV-induced apoptosis of activated primary CD4+ T lymphocytes is not mediated by Fas-Fas ligand.

artículo científico publicado en 1997

HIV-induced apoptosis requires the CD4 receptor cytoplasmic tail and is accelerated by interaction of CD4 with p56lck.

artículo científico publicado en 1996

HIV/SIV infection primes monocytes and dendritic cells for apoptosis.

artículo científico publicado en 2011

Human Analysts at Superhuman Scales: What Has Friendly Software To Do?

artículo científico publicado en 2013

Human viral pathogens are pervasive in wastewater treatment center aerosols

artículo científico publicado en 2017

Identification and biophysical assessment of the molecular recognition mechanisms between the human haemopoietic cell kinase Src homology domain 3 and ALG-2-interacting protein X

artículo científico publicado en 2010

Improving the safety of Staphylococcus aureus polyvalent phages by their production on a Staphylococcus xylosus strain.

artículo científico publicado en 2014

Inhibition of ceramide-induced apoptosis by Bcl-2.

artículo científico publicado en 1995

Interferon gene expression following HIV type 1 infection of monocyte-derived macrophages.

artículo científico publicado en 2004

Interpretable genotype-to-phenotype classifiers with performance guarantees

artículo científico publicado en 2019

Large-scale gene expression analysis of osteoblasts cultured on three different Ti-6Al-4V surface treatments

scientific article published on 01 November 2002

MHC-NP: predicting peptides naturally processed by the MHC.

artículo científico publicado en 2013

Machine learning assisted design of highly active peptides for drug discovery

artículo científico publicado en 2015

Mass spectra alignment using virtual lock-masses

artículo científico publicado en 2019

Metagenomic analysis of stress genes in microbial mat communities from Antarctica and the High Arctic.

artículo científico publicado en 2011

Microarray truths and consequences.

artículo científico publicado en 2004

Mitogen-activated protein kinase pathways defend against bacterial pore-forming toxins.

scholarly article

Modulation of gene expression in Leishmania drug resistant mutants as determined by targeted DNA microarrays ⬇️

artículo científico publicado el 15 de octubre de 2003

Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy.

artículo científico publicado en 2008

Molecular and cellular analysis of human immunodeficiency virus-induced apoptosis in lymphoblastoid T-cell-line-expressing wild-type and mutated CD4 receptors

artículo científico publicado en 1998

Molecular evolution of respiratory syncytial virus fusion gene, Canada, 2006-2010.

artículo científico publicado en 2012

Nasopharyngeal carriage of individual Streptococcus pneumoniae serotypes during pediatric radiologically confirmed community acquired pneumonia following PCV7 introduction in Switzerland.

artículo científico publicado en 2013

Nevirapine resistance mutations of human immunodeficiency virus type 1 selected during therapy

artículo científico publicado en 1994

Nonpathogenesis of simian immunodeficiency virus infection is associated with reduced inflammation and recruitment of plasmacytoid dendritic cells to lymph nodes, not to lack of an interferon type I response, during the acute phase.

artículo científico publicado en 2009

Partial recovery of microbiomes after antibiotic treatment.

artículo científico publicado en 2016

Phenetic Comparison of Prokaryotic Genomes Using k-mers.

artículo científico publicado en 2017

Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons.

artículo científico publicado en 2016

Productive HIV-1 infection of primary CD4+ T cells induces mitochondrial membrane permeabilization leading to a caspase-independent cell death.

artículo científico publicado en 2001

Productive in vitro infection of human umbilical vein endothelial cells and three colon carcinoma cell lines with HIV-1.

artículo científico publicado en 1995

Productive infection and subsequent interaction of CD4-gp120 at the cellular membrane is required for HIV-induced apoptosis of CD4+ T cells.

artículo científico publicado en 1995

Quinolinic acid production is related to macrophage tropic isolates of HIV-1

artículo científico publicado el 1 de diciembre de 1995

R5 and X4 HIV viruses differentially modulate host gene expression in resting CD4+ T cells.

artículo científico publicado en 2008

Ray Meta: scalable de novo metagenome assembly and profiling.

artículo científico publicado en 2012

Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies

artículo científico publicado en 2010

Recombination leads to the rapid emergence of HIV-1 dually resistant mutants under selective drug pressure.

artículo científico publicado en 1996

Role of CD95-activated caspase-1 processing of IL-1beta in TCR-mediated proliferation of HIV-infected CD4(+) T cells.

artículo científico publicado en 2001

Serotyping of Streptococcus pneumoniae based on capsular genes polymorphisms.

artículo científico publicado en 2013

Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.

artículo científico publicado en 2002

Targeted Proteomics of Human Metapneumovirus in Clinical Samples and Viral Cultures.

artículo científico publicado en 2015

Telomeric gene deletion and intrachromosomal amplification in antimony‐resistant Leishmania ⬇️

artículo científico publicado el 6 de marzo de 2013

The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring

artículo científico publicado en 2018

The Ick protein tyrosine kinase is not involved in antibody-mediated CD4 (CDR3-loop) signal transduction that inhibits HIV-1 transcription.

artículo científico publicado en 1998

The initial state of the human gut microbiome determines its reshaping by antibiotics.

artículo científico publicado en 2015

The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility

artículo científico publicado en 2014

The role of surface CD4 in HIV-induced apoptosis.

artículo científico publicado en 1995

The transcription factor Egr1 regulates the HIF-1alpha gene during hypoxia.

artículo científico publicado en 2009

Use of keyword hierarchies to interpret gene expression patterns.

artículo científico publicado en 2001

Virological importance of the protease-cleavage site in human immunodeficiency virus type 1 Nef is independent of both intravirion processing and CD4 down-regulation.

artículo científico publicado en 1998

Lista de obras de

2017 Outbreak of Ebola Virus Disease in Northern Democratic Republic of Congo

2HAPI: a microarray data analysis system.

A Lactococcal Phage Protein Promotes Viral Propagation and Alters the Host Proteomic Response During Infection

A general framework for analyzing data from two short time-series microarray experiments.

A new Microviridae phage isolated from a failed biotechnological process driven by Escherichia coli.

A new perspective on V3 phenotype prediction.

A new serotyping method of S. pneumoniae using an automated microarray-based assay

Antiproliferative effect of retinoid compounds on Kaposi's sarcoma cells

Antiproliferative effects of enediynes on AIDS-derived Kaposi's sarcoma cells.

Bendamustine (Treanda) displays a distinct pattern of cytotoxicity and unique mechanistic features compared with other alkylating agents.

Characterization of cytokine gene expression associated with noninfectious human immunodeficiency virus retinopathy in human autopsy eyes.

Characterization of frataxin gene network in Friedreich's ataxia fibroblasts using the RNA-Seq technique

Clostridium difficile: Investigating Transmission Patterns Between Infected and Colonized Patients Using Whole Genome Sequencing ⬇️

Clostridium difficile: Investigating Transmission Patterns Between Symptomatic and Asymptomatic Patients Using Whole Genome Sequencing.

Communities of Phytoplankton Viruses across the Transition Zone of the St. Lawrence Estuary

Comparative gene expression analysis of blood and brain provides concurrent validation of SELENBP1 up-regulation in schizophrenia

Comparison of Automated Microarray Detection with Real-Time PCR Assays for Detection of Respiratory Viruses in Specimens Obtained from Children

Comparison of risk factors for human metapneumovirus and respiratory syncytial virus disease severity in young children.

Complete Genome Sequence of Escherichia coli Siphophage BRET

Complete Genome Sequence of Streptococcus thermophilus SMQ-301, a Model Strain for Phage-Host Interactions

Correlation between Clostridium difficile bacterial load, commercial real-time PCR cycle thresholds, and results of diagnostic tests based on enzyme immunoassay and cell culture cytotoxicity assay.

Culture-enriched human gut microbiomes reveal core and accessory resistance genes

Cutting edge: a novel viral TNF receptor superfamily member in virulent strains of human cytomegalovirus.

Differential expression profiles of apoptosis-affecting genes in HIV-infected cell lines and patient T cells

Diminished somatostatin gene expression in individuals with HIV and major depressive disorder.

Draft Genome Sequence of Criibacterium bergeronii gen. nov., sp. nov., Strain CCRI-22567T, Isolated from a Vaginal Sample from a Woman with Bacterial Vaginosis

Draft Genome Sequence of Romboutsia maritimum sp. nov. Strain CCRI-22766T, Isolated from Coastal Estuarine Mud.

Draft Genome Sequence of Romboutsia weinsteinii sp. nov. Strain CCRI-19649T Isolated from Surface Water.

Draft Genome Sequence of a Sporulating and Motile Strain of Lachnotalea glycerini Isolated from Water in Québec City, Canada

Early modifications of host cell gene expression induced by HIV-1 ⬇️

Effect of micromechanical stimulations on osteoblasts: development of a device simulating the mechanical situation at the bone-implant interface

Effects of antiretroviral drugs on human immunodeficiency virus type 1-induced CD4(+) T-cell death.

Endonucleases: tools to correct the dystrophin gene.

Enhancement of HIV-1-induced syncytium formation in T cells by the tyrosyl kinase p56lck.

Epitope mapping of the 2009 pandemic and the A/Brisbane/59/2007 seasonal (H1N1) influenza virus haemagglutinins using mAbs and escape mutants.

Evolution of oseltamivir resistance mutations in Influenza A(H1N1) and A(H3N2) viruses during selection in experimentally infected mice.

Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data.

First Complete Genome Sequence of Staphylococcus xylosus, a Meat Starter Culture and a Host to Propagate Staphylococcus aureus Phages.

Gene amplification and point mutations in pyrimidine metabolic genes in 5-fluorouracil resistant Leishmania infantum

Gene expression analysis of osteoblastic cells contacted by orthopedic implant particles.

Gene expression profiling and molecular characterization of antimony resistance in Leishmania amazonensis

Genetic basis of hypersusceptibility to protease inhibitors and low replicative capacity of human immunodeficiency virus type 1 strains in primary infection

Genome-Wide Screen for Haploinsufficient Cell Size Genes in the Opportunistic Yeast Candida albicans

Genome-wide stochastic adaptive DNA amplification at direct and inverted DNA repeats in the parasite Leishmania

Genomic characterization of a large outbreak of Legionella pneumophila serogroup 1 strains in Quebec City, 2012

Gln-tRNAGln synthesis in a dynamic transamidosome from Helicobacter pylori, where GluRS2 hydrolyzes excess Glu-tRNAGln

Global Mapping of the Macrophage-HIV-1 Transcriptome Reveals that Productive Infection Induces Remodeling of Host Cell DNA and Chromatin

HIV Downregulates Interferon-Stimulated Genes in Primary Macrophages ⬇️

HIV-induced apoptosis of activated primary CD4+ T lymphocytes is not mediated by Fas-Fas ligand.

HIV-induced apoptosis requires the CD4 receptor cytoplasmic tail and is accelerated by interaction of CD4 with p56lck.

HIV/SIV infection primes monocytes and dendritic cells for apoptosis.

Human Analysts at Superhuman Scales: What Has Friendly Software To Do?

Human viral pathogens are pervasive in wastewater treatment center aerosols

Identification and biophysical assessment of the molecular recognition mechanisms between the human haemopoietic cell kinase Src homology domain 3 and ALG-2-interacting protein X

Improving the safety of Staphylococcus aureus polyvalent phages by their production on a Staphylococcus xylosus strain.

Inhibition of ceramide-induced apoptosis by Bcl-2.

Interferon gene expression following HIV type 1 infection of monocyte-derived macrophages.

Interpretable genotype-to-phenotype classifiers with performance guarantees

Large-scale gene expression analysis of osteoblasts cultured on three different Ti-6Al-4V surface treatments

MHC-NP: predicting peptides naturally processed by the MHC.

Machine learning assisted design of highly active peptides for drug discovery

Mass spectra alignment using virtual lock-masses

Metagenomic analysis of stress genes in microbial mat communities from Antarctica and the High Arctic.

Microarray truths and consequences.

Mitogen-activated protein kinase pathways defend against bacterial pore-forming toxins.

Modulation of gene expression in Leishmania drug resistant mutants as determined by targeted DNA microarrays ⬇️

Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy.

Molecular and cellular analysis of human immunodeficiency virus-induced apoptosis in lymphoblastoid T-cell-line-expressing wild-type and mutated CD4 receptors

Molecular evolution of respiratory syncytial virus fusion gene, Canada, 2006-2010.

Nasopharyngeal carriage of individual Streptococcus pneumoniae serotypes during pediatric radiologically confirmed community acquired pneumonia following PCV7 introduction in Switzerland.

Nevirapine resistance mutations of human immunodeficiency virus type 1 selected during therapy

Nonpathogenesis of simian immunodeficiency virus infection is associated with reduced inflammation and recruitment of plasmacytoid dendritic cells to lymph nodes, not to lack of an interferon type I response, during the acute phase.

Partial recovery of microbiomes after antibiotic treatment.

Phenetic Comparison of Prokaryotic Genomes Using k-mers.

Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons.

Productive HIV-1 infection of primary CD4+ T cells induces mitochondrial membrane permeabilization leading to a caspase-independent cell death.

Productive in vitro infection of human umbilical vein endothelial cells and three colon carcinoma cell lines with HIV-1.

Productive infection and subsequent interaction of CD4-gp120 at the cellular membrane is required for HIV-induced apoptosis of CD4+ T cells.

Quinolinic acid production is related to macrophage tropic isolates of HIV-1