Lista de obras - Xavier Periole - Dominio Público Uruguay

A direct interaction of cholesterol with the dopamine transporter prevents its out-to-inward transition

artículo científico publicado en 2018

An Amphotericin B Derivative Equally Potent to Amphotericin B and with Increased Safety

artículo científico publicado en 2016

Atomistic and Coarse Grain Topologies for the Cofactors Associated with the Photosystem II Core Complex

artículo científico publicado en 2015

Cholesterol binding to a conserved site modulates conformation, pharmacology and transport kinetics of the human serotonin transporter.

artículo científico publicado en 2018

Combining an Elastic Network With a Coarse-Grained Molecular Force Field: Structure, Dynamics, and Intermolecular Recognition

artículo científico publicado en 2009

Comment on "On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models" by M. Winger, D. Trzesniak, R. Baron and W. F. van Gunsteren, Phys. Chem. Chem. Phys., 2009, 11, 1934

artículo científico publicado en 2010

Computational 'microscopy' of cellular membranes

artículo científico publicado en 2016

Convergence and sampling efficiency in replica exchange simulations of peptide folding in explicit solvent

artículo científico publicado en 2007

Correction to "Atomistic and Coarse Grain Topologies for the Cofactors Associated with the PhotoSystem II Core Complex".

artículo científico publicado en 2015

DNA-encircled lipid bilayers

artículo científico publicado en 2018

Dimer Interface of the Human Serotonin Transporter and Effect of the Membrane Composition.

artículo científico publicado en 2018

Dimerization of Amino Acid Side Chains: Lessons from the Comparison of Different Force Fields

artículo científico publicado en 2012

Dry Martini, a coarse-grained force field for lipid membrane simulations with implicit solvent

artículo científico publicado en 2014

Energetics Underlying Twist Polymorphisms in Amyloid Fibrils

artículo científico publicado en 2017

Evidence for cardiolipin binding sites on the membrane-exposed surface of the cytochrome bc1

artículo científico publicado en 2013

Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex.

artículo científico publicado en 2017

Factors That Affect the Degree of Twist in β-Sheet Structures: A Molecular Dynamics Simulation Study of a Cross-β Filament of the GNNQQNY Peptide

Factors that affect the degree of twist in beta-sheet structures: a molecular dynamics simulation study of a cross-beta filament of the GNNQQNY peptide

artículo científico publicado en 2009

From light-harvesting to photoprotection: structural basis of the dynamic switch of the major antenna complex of plants (LHCII).

artículo científico publicado en 2015

G Protein-Coupled Receptors Self-Assemble in Dynamics Simulations of Model Bilayers

article

Identification of cardiolipin binding sites on cytochrome c oxidase at the entrance of proton channels.

artículo científico publicado en 2013

Improved Angle Potentials for Coarse-Grained Molecular Dynamics Simulations.

artículo científico publicado en 2013

Improved Parameters for the Martini Coarse-Grained Protein Force Field.

artículo científico publicado en 2012

In silico design of robust bolalipid membranes

scientific article published on 01 December 2011

Insight into the molecular mechanism behind PEG-mediated stabilization of biofluid lipases

artículo científico publicado en 2018

Interplay of G Protein-Coupled Receptors with the Membrane: Insights from Supra-Atomic Coarse Grain Molecular Dynamics Simulations.

artículo científico publicado en 2016

Key issues in the computational simulation of GPCR function: representation of loop domains.

artículo científico publicado en 2002

Lipid organization of the plasma membrane

artículo científico publicado en 2014

Molecular Dynamics of Photosystem II Embedded in the Thylakoid Membrane

artículo científico publicado en 2016

Molecular Modeling Investigation of the Interaction between Humicola insolens Cutinase and SDS Surfactant Suggests a Mechanism for Enzyme Inactivation

artículo científico publicado en 2019

Molecular dynamics simulations from putative transition states of alpha-spectrin SH3 domain

artículo científico publicado en 2007

Molecular dynamics simulations of transducin: interdomain and front to back communication in activation and nucleotide exchange.

artículo científico publicado en 2004

Molecular dynamics simulations reveal that apo-HisJ can sample a closed conformation.

artículo científico publicado en 2013

Molecular mechanism of cardiolipin-mediated assembly of respiratory chain supercomplexes.

artículo científico publicado en 2016

Phytochemicals perturb membranes and promiscuously alter protein function.

artículo científico publicado en 2014

Probing the free energy landscape of the FBP28WW domain using multiple techniques

artículo científico publicado en 2009

Rhodopsin forms a dimer with cytoplasmic helix 8 contacts in native membranes.

artículo científico publicado en 2012

Structural determinants of the supramolecular organization of G protein-coupled receptors in bilayers.

artículo científico publicado en 2012

The MARTINI Coarse-Grained Force Field: Extension to Proteins.

artículo científico publicado en 2008

The power of coarse graining in biomolecular simulations.

artículo científico publicado en 2014

Lista de obras de Xavier Periole

A direct interaction of cholesterol with the dopamine transporter prevents its out-to-inward transition

An Amphotericin B Derivative Equally Potent to Amphotericin B and with Increased Safety

Atomistic and Coarse Grain Topologies for the Cofactors Associated with the Photosystem II Core Complex

Cholesterol binding to a conserved site modulates conformation, pharmacology and transport kinetics of the human serotonin transporter.

Combining an Elastic Network With a Coarse-Grained Molecular Force Field: Structure, Dynamics, and Intermolecular Recognition

Comment on "On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models" by M. Winger, D. Trzesniak, R. Baron and W. F. van Gunsteren, Phys. Chem. Chem. Phys., 2009, 11, 1934

Computational 'microscopy' of cellular membranes

Convergence and sampling efficiency in replica exchange simulations of peptide folding in explicit solvent

Correction to "Atomistic and Coarse Grain Topologies for the Cofactors Associated with the PhotoSystem II Core Complex".

DNA-encircled lipid bilayers

Dimer Interface of the Human Serotonin Transporter and Effect of the Membrane Composition.

Dimerization of Amino Acid Side Chains: Lessons from the Comparison of Different Force Fields

Dry Martini, a coarse-grained force field for lipid membrane simulations with implicit solvent

Energetics Underlying Twist Polymorphisms in Amyloid Fibrils

Evidence for cardiolipin binding sites on the membrane-exposed surface of the cytochrome bc1

Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex.

Factors That Affect the Degree of Twist in β-Sheet Structures: A Molecular Dynamics Simulation Study of a Cross-β Filament of the GNNQQNY Peptide

Factors that affect the degree of twist in beta-sheet structures: a molecular dynamics simulation study of a cross-beta filament of the GNNQQNY peptide

From light-harvesting to photoprotection: structural basis of the dynamic switch of the major antenna complex of plants (LHCII).

G Protein-Coupled Receptors Self-Assemble in Dynamics Simulations of Model Bilayers

Identification of cardiolipin binding sites on cytochrome c oxidase at the entrance of proton channels.

Improved Angle Potentials for Coarse-Grained Molecular Dynamics Simulations.

Improved Parameters for the Martini Coarse-Grained Protein Force Field.

In silico design of robust bolalipid membranes

Insight into the molecular mechanism behind PEG-mediated stabilization of biofluid lipases

Interplay of G Protein-Coupled Receptors with the Membrane: Insights from Supra-Atomic Coarse Grain Molecular Dynamics Simulations.

Key issues in the computational simulation of GPCR function: representation of loop domains.

Lipid organization of the plasma membrane

Molecular Dynamics of Photosystem II Embedded in the Thylakoid Membrane

Molecular Modeling Investigation of the Interaction between Humicola insolens Cutinase and SDS Surfactant Suggests a Mechanism for Enzyme Inactivation

Molecular dynamics simulations from putative transition states of alpha-spectrin SH3 domain

Molecular dynamics simulations of transducin: interdomain and front to back communication in activation and nucleotide exchange.

Molecular dynamics simulations reveal that apo-HisJ can sample a closed conformation.

Molecular mechanism of cardiolipin-mediated assembly of respiratory chain supercomplexes.

Phytochemicals perturb membranes and promiscuously alter protein function.

Probing the free energy landscape of the FBP28WW domain using multiple techniques

Rhodopsin forms a dimer with cytoplasmic helix 8 contacts in native membranes.

Structural determinants of the supramolecular organization of G protein-coupled receptors in bilayers.

The MARTINI Coarse-Grained Force Field: Extension to Proteins.

The power of coarse graining in biomolecular simulations.