Lista de obras -

A first-principles model of early evolution: emergence of gene families, species, and preferred protein folds

artículo científico publicado en 2007

Assessing transcription factor motif drift from noisy decoy sequences.

artículo científico publicado en 2005

Binding site graphs: a new graph theoretical framework for prediction of transcription factor binding sites

artículo científico publicado en 2007

Comparisons of predicted genetic modules: identification of co-expressed genes through module gene flow

artículo científico publicado en 2004

Correction: Improving the Precision of the Structure–Function Relationship by Considering Phylogenetic Context

artículo científico publicado en 2005

Defining functional distance using manifold embeddings of gene ontology annotations

artículo científico publicado en 2007

ELISA: a unified, multidimensional view of the protein domain universe.

artículo científico publicado en 2004

ELISA: structure-function inferences based on statistically significant and evolutionarily inspired observations

artículo científico publicado en 2003

Expanding protein universe and its origin from the biological Big Bang

artículo científico publicado en 2002

Functional fingerprints of folds: evidence for correlated structure-function evolution

artículo científico

Imprint of evolution on protein structures.

artículo científico publicado en 2004

Improving the precision of the structure-function relationship by considering phylogenetic context

artículo científico publicado en 2005

Improvisation in evolution of genes and genomes: whose structure is it anyway?

artículo científico publicado en 2008

Natural selection of more designable folds: a mechanism for thermophilic adaptation

artículo científico publicado en 2003

Origins and impact of constraints in evolution of gene families

artículo científico publicado en 2006

Positional clustering improves computational binding site detection and identifies novel cis-regulatory sites in mammalian GABAA receptor subunit genes

artículo científico publicado en 2007

Protein structure and evolutionary history determine sequence space topology

artículo científico publicado en 2005

Proteomic traces of speciation

artículo científico publicado en 2004

Quantifying structure-function uncertainty: a graph theoretical exploration into the origins and limitations of protein annotation

artículo científico publicado en 2004

Lista de obras de

A first-principles model of early evolution: emergence of gene families, species, and preferred protein folds

Assessing transcription factor motif drift from noisy decoy sequences.

Binding site graphs: a new graph theoretical framework for prediction of transcription factor binding sites

Comparisons of predicted genetic modules: identification of co-expressed genes through module gene flow

Correction: Improving the Precision of the Structure–Function Relationship by Considering Phylogenetic Context

Defining functional distance using manifold embeddings of gene ontology annotations

ELISA: a unified, multidimensional view of the protein domain universe.

ELISA: structure-function inferences based on statistically significant and evolutionarily inspired observations

Expanding protein universe and its origin from the biological Big Bang

Functional fingerprints of folds: evidence for correlated structure-function evolution

Imprint of evolution on protein structures.

Improving the precision of the structure-function relationship by considering phylogenetic context

Improvisation in evolution of genes and genomes: whose structure is it anyway?

Natural selection of more designable folds: a mechanism for thermophilic adaptation

Origins and impact of constraints in evolution of gene families

Positional clustering improves computational binding site detection and identifies novel cis-regulatory sites in mammalian GABAA receptor subunit genes

Protein structure and evolutionary history determine sequence space topology

Proteomic traces of speciation

Quantifying structure-function uncertainty: a graph theoretical exploration into the origins and limitations of protein annotation