Lista de obras - Rachel Kolodny - Dominio Público Uruguay

A Novel Geometry-Based Approach to Infer Protein Interface Similarity.

artículo científico publicado en 2018

A library of protein surface patches discriminates between native structures and decoys generated by structure prediction servers ⬇️

artículo científico publicado el 4 de mayo de 2011

Approximate protein structural alignment in polynomial time

artículo científico publicado en 2004

Bridging Themes: Short Protein Segments Found in Different Architectures

artículo científico publicado en 2021

Complex evolutionary footprints revealed in an analysis of reused protein segments of diverse lengths

artículo científico publicado en 2017

Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures.

artículo científico publicado en 2005

ConTemplate Suggests Possible Alternative Conformations for a Query Protein of Known Structure

artículo científico publicado en 2015

CyToStruct: Augmenting the Network Visualization of Cytoscape with the Power of Molecular Viewers

artículo científico publicado en 2015

Efflux Pumps Represent Possible Evolutionary Convergence onto the Beta Barrel Fold

Efflux Pumps Represent Possible Evolutionary Convergence onto the β-Barrel Fold

scholarly article by Meghan Whitney Franklin published in September 2018

Evidence for the emergence of β-trefoils by ‘Peptide Budding’ from an IgG-like β-sandwich

artículo científico publicado en 2022

Evolutionary pathways of repeat protein topology in bacterial outer membrane proteins

scientific article published on 29 November 2018

Faster algorithms for optimal multiple sequence alignment based on pairwise comparisons

artículo científico publicado en 2006

FragBag, an accurate representation of protein structure, retrieves structural neighbors from the entire PDB quickly and accurately.

artículo científico publicado en 2010

Global view of the protein universe

artículo científico publicado en 2014

In Silico Structural and Biochemical Functional Analysis of a Novel CYP21A2 Pathogenic Variant

artículo científico publicado en 2020

Maps of protein structure space reveal a fundamental relationship between protein structure and function ⬇️

artículo científico publicado el 7 de julio de 2011

Navigating Among Known Structures in Protein Space

artículo científico publicado en 2019

On the evolution of protein-adenine binding

artículo científico publicado en 2020

On the universe of protein folds

artículo científico publicado en 2013

Protein structure comparison: implications for the nature of 'fold space', and structure and function prediction.

artículo científico publicado en 2006

Redundancy-weighting for better inference of protein structural features.

artículo científico publicado en 2014

Representation of the Protein Universe using Classifications, Maps, and Networks

Sequence-similar, structure-dissimilar protein pairs in the PDB.

artículo científico publicado en 2008

Similarity between the Usher Plug and the Repeating Domain of an Ice-adhesin: Evolution via Surface Reshaping

Small libraries of protein fragments model native protein structures accurately.

artículo científico publicado en 2002

Using ConTemplate and the PDB to explore conformational space: on the detection of rare protein conformations

artículo científico publicado en 2015

Using an alignment of fragment strings for comparing protein structures.

artículo científico publicado en 2007

VISTAL--a new 2D visualization tool of protein 3D structural alignments

artículo científico publicado en 2006

Lista de obras de Rachel Kolodny

A Novel Geometry-Based Approach to Infer Protein Interface Similarity.

A library of protein surface patches discriminates between native structures and decoys generated by structure prediction servers ⬇️

Approximate protein structural alignment in polynomial time

Bridging Themes: Short Protein Segments Found in Different Architectures

Complex evolutionary footprints revealed in an analysis of reused protein segments of diverse lengths

Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures.

ConTemplate Suggests Possible Alternative Conformations for a Query Protein of Known Structure

CyToStruct: Augmenting the Network Visualization of Cytoscape with the Power of Molecular Viewers

Efflux Pumps Represent Possible Evolutionary Convergence onto the Beta Barrel Fold

Efflux Pumps Represent Possible Evolutionary Convergence onto the β-Barrel Fold

Evidence for the emergence of β-trefoils by ‘Peptide Budding’ from an IgG-like β-sandwich

Evolutionary pathways of repeat protein topology in bacterial outer membrane proteins

Faster algorithms for optimal multiple sequence alignment based on pairwise comparisons

FragBag, an accurate representation of protein structure, retrieves structural neighbors from the entire PDB quickly and accurately.

Global view of the protein universe

In Silico Structural and Biochemical Functional Analysis of a Novel CYP21A2 Pathogenic Variant

Maps of protein structure space reveal a fundamental relationship between protein structure and function ⬇️

Navigating Among Known Structures in Protein Space

On the evolution of protein-adenine binding

On the universe of protein folds

Protein structure comparison: implications for the nature of 'fold space', and structure and function prediction.

Redundancy-weighting for better inference of protein structural features.

Representation of the Protein Universe using Classifications, Maps, and Networks

Sequence-similar, structure-dissimilar protein pairs in the PDB.

Similarity between the Usher Plug and the Repeating Domain of an Ice-adhesin: Evolution via Surface Reshaping

Small libraries of protein fragments model native protein structures accurately.

Using ConTemplate and the PDB to explore conformational space: on the detection of rare protein conformations

Using an alignment of fragment strings for comparing protein structures.

VISTAL--a new 2D visualization tool of protein 3D structural alignments