Lista de obras - Andras Fiser - Dominio Público Uruguay

2-(m-Azidobenzoyl)taxol binds differentially to distinct β-tubulin isotypes

artículo científico publicado en 2016

A Modular Perspective of Protein Structures: Application to Fragment Based Loop Modeling ⬇️

artículo científico publicado el 1 de enero de 2013

A P425R mutation of the proton-coupled folate transporter causing hereditary folate malabsorption produces a highly selective alteration in folate binding ⬇️

artículo científico publicado el 15 de febrero de 2012

A biochemical mechanism for the oncogenic potential of the p110β catalytic subunit of phosphoinositide 3-kinase ⬇️

artículo científico publicado el 28 de octubre de 2010

A nuclear variant of ErbB3 receptor tyrosine kinase regulates ezrin distribution and Schwann cell myelination

artículo científico publicado en 2011

Assessing the accuracy of contact predictions in CASP13

scientific article published on 24 October 2019

Assessment of chemical-crosslink-assisted protein structure modeling in CASP13

artículo científico publicado en 2019

Assessment of chemical-crosslink-assisted protein structure modeling in CASP13

scientific article published on 03 January 2020

Buprenorphine decreases the CCL2-mediated chemotactic response of monocytes

artículo científico publicado en 2015

Comprehensive Proteomic Analysis of Membrane Proteins in Toxoplasma gondii ⬇️

artículo científico publicado el 10 de octubre de 2010

Computational Redesign of PD-1 Interface for PD-L1 Ligand Selectivity

artículo científico publicado en 2019

Computational analysis and experimental validation of gene predictions in Toxoplasma gondii

artículo científico publicado en 2008

Control of mitochondrial function and cell growth by the atypical cadherin Fat1.

artículo científico publicado en 2016

Crystal structure of human Karyopherin β2 bound to the PY-NLS of Saccharomyces cerevisiae Nab2 ⬇️

artículo científico publicado el 28 de marzo de 2013

Development of a motif-based topology-independent structure comparison method to identify evolutionarily related folds

artículo científico publicado en 2016

Discovery of receptor-ligand interfaces in the immunoglobulin superfamily

scientific article published on 29 July 2019

Distinct pose of discodermolide in taxol binding pocket drives a complementary mode of microtubule stabilization

artículo científico publicado en 2009

EPIC-DB: a proteomics database for studying Apicomplexan organisms

artículo científico publicado en 2009

Evolutionary and biophysical relationships among the papillomavirus E2 proteins

artículo científico publicado en 2009

Expression, Clinical Significance, and Receptor Identification of the Newest B7 Family Member HHLA2 Protein

artículo científico publicado en 2014

Frozen tissue can provide reproducible proteomic results of subcellular fractionation ⬇️

artículo científico publicado el 13 de julio de 2011

Functional Classification of Immune Regulatory Proteins ⬇️

artículo científico publicado el 11 de abril de 2013

Functional clustering of immunoglobulin superfamily proteins with protein-protein interaction information calibrated hidden Markov model sequence profiles

artículo científico publicado en 2013

Functional roles of aspartate residues of the proton-coupled folate transporter (PCFT-SLC46A1); a D156Y mutation causing hereditary folate malabsorption

artículo científico publicado en 2010

Functional roles of the A335 and G338 residues of the proton-coupled folate transporter (PCFT-SLC46A1) mutated in hereditary folate malabsorption ⬇️

artículo científico publicado el 25 de julio de 2012

Gene regulation by PAX6: structural-functional correlations of missense mutants and transcriptional control of Trpm3/miR-204.

artículo científico publicado en 2014

Genetic resistance to purine nucleoside phosphorylase inhibition in Plasmodium falciparum

artículo científico publicado en 2018

HIV-Tat regulates macrophage gene expression in the context of neuroAIDS.

artículo científico publicado en 2017

Hallmarks of molecular action of microtubule stabilizing agents: effects of epothilone B, ixabepilone, peloruside A, and laulimalide on microtubule conformation

artículo científico publicado en 2011

High-throughput computational and experimental techniques in structural genomics

artículo científico publicado en 2004

Identification of Tyr residues that enhance folate substrate binding and constrain oscillation of the proton-coupled folate transporter (PCFT-SLC46A1).

artículo científico publicado en 2015

Identification of a functionally critical GXXG motif and its relationship to the folate binding site of the proton-coupled folate transporter (PCFT-SLC46A1) ⬇️

artículo científico publicado el 11 de julio de 2012

Identification of an Extracellular Gate for the Proton-coupled Folate Transporter (PCFT-SLC46A1) by Cysteine Cross-linking

artículo científico publicado en 2016

Identifying Functionally Informative Evolutionary Sequence Profiles

artículo científico publicado en 2017

MODBASE, a database of annotated comparative protein structure models, and associated resources.

artículo científico publicado en 2004

Metabolomic Analysis of Patient Plasma Yields Evidence of Plant-Like α-Linolenic Acid Metabolism in Plasmodium falciparum ⬇️

artículo científico publicado el 7 de mayo de 2012

Modeling Loops in Protein Structures

Modeling Protein Structure from its Sequence

Modeling Proteins Using a Super-Secondary Structure Library and NMR Chemical Shift Information ⬇️

artículo científico publicado el 16 de mayo de 2013

Modularity of Protein Folds as a Tool for Template-Free Modeling of Structures

artículo científico publicado en 2015

New York-Structural GenomiX Research Consortium (NYSGXRC): a large scale center for the protein structure initiative.

artículo científico publicado en 2005

New statistical potential for quality assessment of protein models and a survey of energy functions

artículo científico publicado en 2010

Nonprotein based enrichment method to analyze peptide cross-linking in protein complexes

scientific article published on September 2009

Nuc-ErbB3 regulates H3K27me3 levels and HMT activity to establish epigenetic repression during peripheral myelination

artículo científico publicado en 2016

Outcome of a workshop on applications of protein models in biomedical research

artículo científico publicado en 2009

PSI-2: structural genomics to cover protein domain family space.

artículo científico publicado en 2009

Pathogenic NAP57 mutations decrease ribonucleoprotein assembly in dyskeratosis congenita

artículo científico publicado en 2009

Pentapeptide repeat proteins

artículo científico publicado en 2006

Photo-assisted peptide enrichment in protein complex cross-linking analysis of a model homodimeric protein using mass spectrometry

artículo científico publicado en 2011

Post-translational modifications to Toxoplasma gondii alpha- and beta-tubulins include novel C-terminal methylation

artículo científico publicado en 2010

Predicting disulfide bond connectivity in proteins by correlated mutations analysis

artículo científico publicado en 2008

Prediction of DNA binding motifs from 3D models of transcription factors; identifying TLX3 regulated genes

artículo científico publicado en 2014

ProtLID, a Residue-Based Pharmacophore Approach to Identify Cognate Protein Ligands in the Immunoglobulin Superfamily

artículo científico publicado en 2016

Protein production and purification

artículo científico publicado en 2008

Protein structure based prediction of catalytic residues ⬇️

artículo científico publicado el 22 de febrero de 2013

Protein-protein binding supersites

Residues in the eighth transmembrane domain of the proton-coupled folate transporter (SLC46A1) play an important role in defining the aqueous translocation pathway and in folate substrate binding

artículo científico

Role of the fourth transmembrane domain in proton-coupled folate transporter function as assessed by the substituted cysteine accessibility method ⬇️

artículo científico publicado el 3 de abril de 2013

Role of the tryptophan residues in proton-coupled folate transporter (PCFT-SLC46A1) function

artículo científico publicado en 2016

Smotifs as structural local descriptors of supersecondary elements: classification, completeness and applications

Structural basis of inducible costimulator ligand costimulatory function: determination of the cell surface oligomeric state and functional mapping of the receptor binding site of the protein.

artículo científico publicado en 2006

Structural characteristics of novel protein folds

artículo científico publicado en 2010

Structural genomics is the largest contributor of novel structural leverage

artículo científico publicado en 2009

Structural genomics of protein phosphatases

artículo científico publicado en 2007

Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 Å resolution

artículo científico publicado en 2010

Substituted-cysteine accessibility and cross-linking identify an exofacial cleft in the 7(th) and 8(th) helices of the proton-coupled folate transporter (SLC46A1).

artículo científico publicado en 2017

Template-Based Protein Structure Modeling ⬇️

artículo científico publicado el 1 de enero de 2010

The Underlying Molecular and Network Level Mechanisms in the Evolution of Robustness in Gene Regulatory Networks ⬇️

artículo científico publicado el 3 de enero de 2013

The choice of sequence homologs included in multiple sequence alignments has a dramatic impact on evolutionary conservation analysis

artículo científico publicado en 2019

The functional roles of the His247 and His281 residues in folate and proton translocation mediated by the human proton-coupled folate transporter SLC46A1.

artículo científico publicado en 2009

The ybeY protein from Escherichia coli is a metalloprotein.

artículo científico publicado en 2005

The zebrafish forkhead transcription factor Foxi1 specifies epibranchial placode-derived sensory neurons ⬇️

artículo científico publicado el 1 de junio de 2003

Tools for comparative protein structure modeling and analysis

artículo científico publicado en 2003

Toxoplasma gondii proteomics

scientific article published on June 2009

Transactivation of Abl by the Crk II adapter protein requires a PNAY sequence in the Crk C-terminal SH3 domain

artículo científico publicado en 2005

Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative.

artículo científico publicado en 2014

Lista de obras de Andras Fiser

2-(m-Azidobenzoyl)taxol binds differentially to distinct β-tubulin isotypes

A Modular Perspective of Protein Structures: Application to Fragment Based Loop Modeling ⬇️

A P425R mutation of the proton-coupled folate transporter causing hereditary folate malabsorption produces a highly selective alteration in folate binding ⬇️

A biochemical mechanism for the oncogenic potential of the p110β catalytic subunit of phosphoinositide 3-kinase ⬇️

A nuclear variant of ErbB3 receptor tyrosine kinase regulates ezrin distribution and Schwann cell myelination

Assessing the accuracy of contact predictions in CASP13

Assessment of chemical-crosslink-assisted protein structure modeling in CASP13

Assessment of chemical-crosslink-assisted protein structure modeling in CASP13

Buprenorphine decreases the CCL2-mediated chemotactic response of monocytes

Comprehensive Proteomic Analysis of Membrane Proteins in Toxoplasma gondii ⬇️

Computational Redesign of PD-1 Interface for PD-L1 Ligand Selectivity

Computational analysis and experimental validation of gene predictions in Toxoplasma gondii

Control of mitochondrial function and cell growth by the atypical cadherin Fat1.

Crystal structure of human Karyopherin β2 bound to the PY-NLS of Saccharomyces cerevisiae Nab2 ⬇️

Development of a motif-based topology-independent structure comparison method to identify evolutionarily related folds

Discovery of receptor-ligand interfaces in the immunoglobulin superfamily

Distinct pose of discodermolide in taxol binding pocket drives a complementary mode of microtubule stabilization

EPIC-DB: a proteomics database for studying Apicomplexan organisms

Evolutionary and biophysical relationships among the papillomavirus E2 proteins

Expression, Clinical Significance, and Receptor Identification of the Newest B7 Family Member HHLA2 Protein

Frozen tissue can provide reproducible proteomic results of subcellular fractionation ⬇️

Functional Classification of Immune Regulatory Proteins ⬇️

Functional clustering of immunoglobulin superfamily proteins with protein-protein interaction information calibrated hidden Markov model sequence profiles

Functional roles of aspartate residues of the proton-coupled folate transporter (PCFT-SLC46A1); a D156Y mutation causing hereditary folate malabsorption

Functional roles of the A335 and G338 residues of the proton-coupled folate transporter (PCFT-SLC46A1) mutated in hereditary folate malabsorption ⬇️

Gene regulation by PAX6: structural-functional correlations of missense mutants and transcriptional control of Trpm3/miR-204.

Genetic resistance to purine nucleoside phosphorylase inhibition in Plasmodium falciparum

HIV-Tat regulates macrophage gene expression in the context of neuroAIDS.

Hallmarks of molecular action of microtubule stabilizing agents: effects of epothilone B, ixabepilone, peloruside A, and laulimalide on microtubule conformation

High-throughput computational and experimental techniques in structural genomics

Identification of Tyr residues that enhance folate substrate binding and constrain oscillation of the proton-coupled folate transporter (PCFT-SLC46A1).

Identification of a functionally critical GXXG motif and its relationship to the folate binding site of the proton-coupled folate transporter (PCFT-SLC46A1) ⬇️

Identification of an Extracellular Gate for the Proton-coupled Folate Transporter (PCFT-SLC46A1) by Cysteine Cross-linking

Identifying Functionally Informative Evolutionary Sequence Profiles

MODBASE, a database of annotated comparative protein structure models, and associated resources.

Metabolomic Analysis of Patient Plasma Yields Evidence of Plant-Like α-Linolenic Acid Metabolism in Plasmodium falciparum ⬇️

Modeling Loops in Protein Structures

Modeling Protein Structure from its Sequence

Modeling Proteins Using a Super-Secondary Structure Library and NMR Chemical Shift Information ⬇️

Modularity of Protein Folds as a Tool for Template-Free Modeling of Structures

New York-Structural GenomiX Research Consortium (NYSGXRC): a large scale center for the protein structure initiative.

New statistical potential for quality assessment of protein models and a survey of energy functions

Nonprotein based enrichment method to analyze peptide cross-linking in protein complexes

Nuc-ErbB3 regulates H3K27me3 levels and HMT activity to establish epigenetic repression during peripheral myelination

Outcome of a workshop on applications of protein models in biomedical research

PSI-2: structural genomics to cover protein domain family space.

Pathogenic NAP57 mutations decrease ribonucleoprotein assembly in dyskeratosis congenita

Pentapeptide repeat proteins

Photo-assisted peptide enrichment in protein complex cross-linking analysis of a model homodimeric protein using mass spectrometry

Post-translational modifications to Toxoplasma gondii alpha- and beta-tubulins include novel C-terminal methylation

Predicting disulfide bond connectivity in proteins by correlated mutations analysis

Prediction of DNA binding motifs from 3D models of transcription factors; identifying TLX3 regulated genes

ProtLID, a Residue-Based Pharmacophore Approach to Identify Cognate Protein Ligands in the Immunoglobulin Superfamily

Protein production and purification

Protein structure based prediction of catalytic residues ⬇️

Protein-protein binding supersites

Residues in the eighth transmembrane domain of the proton-coupled folate transporter (SLC46A1) play an important role in defining the aqueous translocation pathway and in folate substrate binding

Role of the fourth transmembrane domain in proton-coupled folate transporter function as assessed by the substituted cysteine accessibility method ⬇️

Role of the tryptophan residues in proton-coupled folate transporter (PCFT-SLC46A1) function

Smotifs as structural local descriptors of supersecondary elements: classification, completeness and applications

Structural basis of inducible costimulator ligand costimulatory function: determination of the cell surface oligomeric state and functional mapping of the receptor binding site of the protein.

Structural characteristics of novel protein folds

Structural genomics is the largest contributor of novel structural leverage

Structural genomics of protein phosphatases

Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 Å resolution

Substituted-cysteine accessibility and cross-linking identify an exofacial cleft in the 7(th) and 8(th) helices of the proton-coupled folate transporter (SLC46A1).

Template-Based Protein Structure Modeling ⬇️

The Underlying Molecular and Network Level Mechanisms in the Evolution of Robustness in Gene Regulatory Networks ⬇️

The choice of sequence homologs included in multiple sequence alignments has a dramatic impact on evolutionary conservation analysis

The functional roles of the His247 and His281 residues in folate and proton translocation mediated by the human proton-coupled folate transporter SLC46A1.

The ybeY protein from Escherichia coli is a metalloprotein.

The zebrafish forkhead transcription factor Foxi1 specifies epibranchial placode-derived sensory neurons ⬇️

Tools for comparative protein structure modeling and analysis

Toxoplasma gondii proteomics

Transactivation of Abl by the Crk II adapter protein requires a PNAY sequence in the Crk C-terminal SH3 domain

Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative.