Lista de obras - Chip Stewart - Dominio Público Uruguay

<i>ZBTB33</i> is mutated in clonal hematopoiesis and myelodysplastic syndromes and impacts RNA splicing

artículo científico publicado en 2021

A (fire)cloud-based DNA methylation data preprocessing and quality control platform

A comprehensive map of mobile element insertion polymorphisms in humans

artículo científico publicado en 2011

A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers

artículo científico publicado en 2012

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

artículo científico publicado en 2020

Author Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

article

Clonal evolution in patients with chronic lymphocytic leukaemia developing resistance to BTK inhibition

artículo científico publicado en 2016

Clonal hematopoiesis is associated with adverse outcomes in multiple myeloma patients undergoing transplant

artículo científico publicado en 2020

Combined tumor and immune signals from genomes or transcriptomes predict outcomes of checkpoint inhibition in melanoma

artículo científico publicado en 2022

Comment on “DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification”

artículo científico publicado en 2018

Copy Number Variation detection from 1000 Genomes project exon capture sequencing data ⬇️

artículo científico publicado el 17 de noviembre de 2012

DNA defects, epigenetics, and gene expression in cancer-adjacent breast: a study from The Cancer Genome Atlas

artículo científico publicado en 2016

DeTiN: overcoming tumor-in-normal contamination

artículo científico publicado en 2018

Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

artículo científico publicado en 2013

Electroporation of a multicellular system: asymptotic model analysis

scientific article published on 01 January 2004

Erratum: Corrigendum: The genomic landscape of juvenile myelomonocytic leukemia

article

Evolution and impact of subclonal mutations in chronic lymphocytic leukemia

artículo científico publicado en 2013

Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity

artículo científico publicado en 2013

Exome sequencing identifies BRAF mutations in papillary craniopharyngiomas

artículo científico publicado en 2014

Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background

artículo científico publicado en 2015

Expression divergence measured by transcriptome sequencing of four yeast species ⬇️

artículo científico publicado el 29 de diciembre de 2011

GE-05EXOME SEQUENCING REVEALS BRAF MUTATIONS IN PAPILLARY CRANIOPHARYNGIOMAS.

artículo científico publicado en 2014

Genetic and clonal dissection of murine small cell lung carcinoma progression by genome sequencing

artículo científico publicado en 2014

Genetic subtypes of smoldering multiple myeloma are associated with distinct pathogenic phenotypes and clinical outcomes

artículo científico publicado en 2022

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

artículo científico publicado en 2016

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

artículo científico publicado en 2016

Genomic Evolutionary Patterns of Leiomyosarcoma and Liposarcoma

scientific article published on 04 June 2019

Genomic Profiling of Smoldering Multiple Myeloma Identifies Patients at a High Risk of Disease Progression

scientific article published on 22 May 2020

Genomic analyses of PMBL reveal new drivers and mechanisms of sensitivity to PD-1 blockade

scientific article published on 01 December 2019

Genomic analyses of flow-sorted Hodgkin Reed-Sternberg cells reveal complementary mechanisms of immune evasion

artículo científico publicado en 2019

Growth dynamics in naturally progressing chronic lymphocytic leukaemia

scientific article published on 29 May 2019

Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders

artículo científico publicado en 2013

Integrated Molecular Characterization of Uterine Carcinosarcoma

artículo científico publicado en 2017

Integrative Molecular Characterization of Malignant Pleural Mesothelioma

artículo científico publicado en 2018

Integrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients

artículo científico publicado en 2013

Lack of transgenerational effects of ionizing radiation exposure from the Chernobyl accident

artículo científico publicado en 2021

Landscape of genomic alterations in cervical carcinomas

artículo científico publicado en 2013

MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping

artículo científico publicado en 2014

Mapping copy number variation by population-scale genome sequencing

artículo científico publicado en 2011

Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

article

Mutational heterogeneity in cancer and the search for new cancer-associated genes

artículo científico publicado en 2013

Mutations driving CLL and their evolution in progression and relapse

artículo científico publicado en 2015

Paired exome analysis of Barrett's esophagus and adenocarcinoma

artículo científico publicado en 2015

Prospective derivation of a living organoid biobank of colorectal cancer patients.

artículo científico publicado en 2015

Publisher Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

article

RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues

artículo científico publicado en 2019

Recurrent and functional regulatory mutations in breast cancer

artículo científico publicado en 2017

Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines

Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors.

artículo científico publicado en 2017

Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression ⬇️

artículo científico publicado el 12 de enero de 2013

Selective and mechanistic sources of recurrent rearrangements across the cancer genome

Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project

artículo científico publicado en 2015

Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

artículo científico publicado en 2012

Somatic retrotransposition in human cancer revealed by whole-genome and exome sequencing

artículo científico publicado en 2014

Sporadic Early-Onset Diffuse Gastric Cancers Have High Frequency of Somatic CDH1 Alterations, but Low Frequency of Somatic RHOA Mutations Compared With Late-Onset Cancers.

artículo científico publicado en 2017

Sporadic hemangioblastomas are characterized by cryptic VHL inactivation

artículo científico publicado en 2014

SvABA: genome-wide detection of structural variants and indels by local assembly.

artículo científico publicado en 2018

Targetable genetic features of primary testicular and primary central nervous system lymphomas

artículo científico publicado en 2015

The functional spectrum of low-frequency coding variation ⬇️

artículo científico publicado el 14 de septiembre de 2011

The genetic landscape of high-risk neuroblastoma

artículo científico publicado en 2013

The genomic landscape of juvenile myelomonocytic leukemia

artículo científico publicado en 2015

The genomic landscape of pediatric Ewing sarcoma

artículo científico publicado en 2014

Widespread Chromosomal Losses and Mitochondrial DNA Alterations as Genetic Drivers in Hürthle Cell Carcinoma

scientific article published on 01 August 2018

Lista de obras de Chip Stewart

<i>ZBTB33</i> is mutated in clonal hematopoiesis and myelodysplastic syndromes and impacts RNA splicing

A (fire)cloud-based DNA methylation data preprocessing and quality control platform

A comprehensive map of mobile element insertion polymorphisms in humans

A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Author Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

Clonal evolution in patients with chronic lymphocytic leukaemia developing resistance to BTK inhibition

Clonal hematopoiesis is associated with adverse outcomes in multiple myeloma patients undergoing transplant

Combined tumor and immune signals from genomes or transcriptomes predict outcomes of checkpoint inhibition in melanoma

Comment on “DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification”

Copy Number Variation detection from 1000 Genomes project exon capture sequencing data ⬇️

DNA defects, epigenetics, and gene expression in cancer-adjacent breast: a study from The Cancer Genome Atlas

DeTiN: overcoming tumor-in-normal contamination

Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

Electroporation of a multicellular system: asymptotic model analysis

Erratum: Corrigendum: The genomic landscape of juvenile myelomonocytic leukemia

Evolution and impact of subclonal mutations in chronic lymphocytic leukemia

Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity

Exome sequencing identifies BRAF mutations in papillary craniopharyngiomas

Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background

Expression divergence measured by transcriptome sequencing of four yeast species ⬇️

GE-05EXOME SEQUENCING REVEALS BRAF MUTATIONS IN PAPILLARY CRANIOPHARYNGIOMAS.

Genetic and clonal dissection of murine small cell lung carcinoma progression by genome sequencing

Genetic subtypes of smoldering multiple myeloma are associated with distinct pathogenic phenotypes and clinical outcomes

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

Genomic Evolutionary Patterns of Leiomyosarcoma and Liposarcoma

Genomic Profiling of Smoldering Multiple Myeloma Identifies Patients at a High Risk of Disease Progression

Genomic analyses of PMBL reveal new drivers and mechanisms of sensitivity to PD-1 blockade

Genomic analyses of flow-sorted Hodgkin Reed-Sternberg cells reveal complementary mechanisms of immune evasion

Growth dynamics in naturally progressing chronic lymphocytic leukaemia

Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders

Integrated Molecular Characterization of Uterine Carcinosarcoma

Integrative Molecular Characterization of Malignant Pleural Mesothelioma

Integrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients

Lack of transgenerational effects of ionizing radiation exposure from the Chernobyl accident

Landscape of genomic alterations in cervical carcinomas

MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping

Mapping copy number variation by population-scale genome sequencing

Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

Mutational heterogeneity in cancer and the search for new cancer-associated genes

Mutations driving CLL and their evolution in progression and relapse

Paired exome analysis of Barrett's esophagus and adenocarcinoma

Prospective derivation of a living organoid biobank of colorectal cancer patients.

Publisher Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues

Recurrent and functional regulatory mutations in breast cancer

Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines

Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors.

Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression ⬇️

Selective and mechanistic sources of recurrent rearrangements across the cancer genome

Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project

Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

Somatic retrotransposition in human cancer revealed by whole-genome and exome sequencing

Sporadic Early-Onset Diffuse Gastric Cancers Have High Frequency of Somatic CDH1 Alterations, but Low Frequency of Somatic RHOA Mutations Compared With Late-Onset Cancers.

Sporadic hemangioblastomas are characterized by cryptic VHL inactivation

SvABA: genome-wide detection of structural variants and indels by local assembly.

Targetable genetic features of primary testicular and primary central nervous system lymphomas

The functional spectrum of low-frequency coding variation ⬇️

The genetic landscape of high-risk neuroblastoma

The genomic landscape of juvenile myelomonocytic leukemia

The genomic landscape of pediatric Ewing sarcoma

Widespread Chromosomal Losses and Mitochondrial DNA Alterations as Genetic Drivers in Hürthle Cell Carcinoma