Lista de obras - Julian Catchen - Dominio Público Uruguay

A RAD-tag genetic map for the platyfish (Xiphophorus maculatus) reveals mechanisms of karyotype evolution among teleost fish

artículo científico publicado en 2014

Adapterama IV: Sequence Capture of Dual-digest RADseq Libraries with Identifiable Duplicates (RADcap)

Antarctic blackfin icefish genome reveals adaptations to extreme environments

artículo científico publicado en 2019

Automated identification of conserved synteny after whole-genome duplication

artículo científico publicado en 2009

Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny

scientific article published on 10 September 2020

Comparative oncogenomic analysis of copy number alterations in human and zebrafish tumors enables cancer driver discovery

artículo científico publicado en 2013

Consequences of lineage-specific gene loss on functional evolution of surviving paralogs: ALDH1A and retinoic acid signaling in vertebrate genomes

artículo científico publicado en 2009

Conserved synteny and the zebrafish genome

artículo científico publicado en 2011

Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

artículo científico publicado en 2016

Deriving genotypes from RAD-seq short-read data using Stacks

artículo científico publicado en 2017

Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, <i>Trematomus borchgrevinki</i>

artículo científico publicado en 2022

Evaluating the genome-wide impacts of species translocations: the greater prairie-chicken as a case study

artículo científico publicado en 2021

Evolution of a new function by degenerative mutation in cephalochordate steroid receptors

artículo científico publicado en 2008

Evolution of developmental regulation in the vertebrate FgfD subfamily

artículo científico publicado en 2010

Evolution of stickleback in 50 years on earthquake-uplifted islands.

artículo científico publicado en 2015

Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation

artículo científico publicado en 2009

Footprints in time: comparative quantitative trait loci mapping of the pitcher-plant mosquito, Wyeomyia smithii

artículo científico publicado en 2012

Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication ⬇️

artículo científico publicado el 1 de agosto de 2011

Genomic Resources for Darters (Percidae: Etheostominae) Provide Insight into Postzygotic Barriers Implicated in Speciation

artículo científico publicado en 2020

Genomic diversity is similar between Atlantic Forest restorations and natural remnants for the native tree Casearia sylvestris Sw.

artículo científico publicado en 2018

Hybridization and postzygotic isolation promote reinforcement of male mating preferences in a diverse group of fishes with traditional sex roles

artículo científico publicado en 2018

Identification of transcriptome SNPs between Xiphophorus lines and species for assessing allele specific gene expression within F₁ interspecies hybrids

artículo científico publicado en 2011

Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species

artículo científico publicado en 2021

Inferring ancestral gene order

artículo científico publicado en 2008

Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes

artículo científico publicado en 2022

Male and female contributions to behavioral isolation in darters as a function of genetic distance and color distance.

artículo científico publicado en 2017

Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout

artículo científico publicado en 2011

Parallel selection on thermal physiology facilitates repeated adaptation of city lizards to urban heat islands

artículo científico publicado en 2020

Population genomic analysis of model and nonmodel organisms using sequenced RAD tags

artículo científico publicado en 2012

RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data

artículo científico publicado en 2016

Repeated Selection of Alternatively Adapted Haplotypes Creates Sweeping Genomic Remodeling in Stickleback

article

Replicate phylogenies and post-glacial range expansion of the pitcher-plant mosquito, Wyeomyia smithii, in North America

artículo científico publicado en 2013

Resolving postglacial phylogeography using high-throughput sequencing.

artículo científico publicado en 2010

Retinoic acid metabolic genes, meiosis, and gonadal sex differentiation in zebrafish

artículo científico publicado en 2013

Selection, Linkage, and Population Structure Interact To Shape Genetic Variation Among Threespine Stickleback Genomes

artículo científico publicado en 2019

Simulation with RADinitio improves RADseq experimental design and sheds light on sources of missing data

scientific article published on 10 April 2020

Stacks 2: Analytical methods for paired-end sequencing improve RADseq-based population genomics

artículo científico publicado en 2019

Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences ⬇️

artículo científico publicado el 1 de agosto de 2011

Stacks: an analysis tool set for population genomics

artículo científico publicado en 2013

The Developmental and Genetic Architecture of the Sexually Selected Male Ornament of Swordtails

artículo científico publicado en 2020

The Novel Evolution of the Sperm Whale Genome

artículo científico publicado en 2017

The gene history of zebrafish tlr4a and tlr4b is predictive of their divergent functions.

artículo científico publicado en 2009

The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits

artículo científico publicado en 2013

The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA-sequencing.

artículo científico publicado en 2013

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

artículo científico publicado en 2016

UDP xylose synthase 1 is required for morphogenesis and histogenesis of the craniofacial skeleton

artículo científico publicado en 2010

Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations.

artículo científico publicado en 2017

When structure leads to sex: Untangling signals in population genetic data sets

artículo científico publicado en 2017

Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard.

artículo científico publicado en 2017

Lista de obras de Julian Catchen

A RAD-tag genetic map for the platyfish (Xiphophorus maculatus) reveals mechanisms of karyotype evolution among teleost fish

Adapterama IV: Sequence Capture of Dual-digest RADseq Libraries with Identifiable Duplicates (RADcap)

Antarctic blackfin icefish genome reveals adaptations to extreme environments

Automated identification of conserved synteny after whole-genome duplication

Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny

Comparative oncogenomic analysis of copy number alterations in human and zebrafish tumors enables cancer driver discovery

Consequences of lineage-specific gene loss on functional evolution of surviving paralogs: ALDH1A and retinoic acid signaling in vertebrate genomes

Conserved synteny and the zebrafish genome

Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

Deriving genotypes from RAD-seq short-read data using Stacks

Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, <i>Trematomus borchgrevinki</i>

Evaluating the genome-wide impacts of species translocations: the greater prairie-chicken as a case study

Evolution of a new function by degenerative mutation in cephalochordate steroid receptors

Evolution of developmental regulation in the vertebrate FgfD subfamily

Evolution of stickleback in 50 years on earthquake-uplifted islands.

Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation

Footprints in time: comparative quantitative trait loci mapping of the pitcher-plant mosquito, Wyeomyia smithii

Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication ⬇️

Genomic Resources for Darters (Percidae: Etheostominae) Provide Insight into Postzygotic Barriers Implicated in Speciation

Genomic diversity is similar between Atlantic Forest restorations and natural remnants for the native tree Casearia sylvestris Sw.

Hybridization and postzygotic isolation promote reinforcement of male mating preferences in a diverse group of fishes with traditional sex roles

Identification of transcriptome SNPs between Xiphophorus lines and species for assessing allele specific gene expression within F₁ interspecies hybrids

Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species

Inferring ancestral gene order

Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes

Male and female contributions to behavioral isolation in darters as a function of genetic distance and color distance.

Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout

Parallel selection on thermal physiology facilitates repeated adaptation of city lizards to urban heat islands

Population genomic analysis of model and nonmodel organisms using sequenced RAD tags

RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data

Repeated Selection of Alternatively Adapted Haplotypes Creates Sweeping Genomic Remodeling in Stickleback

Replicate phylogenies and post-glacial range expansion of the pitcher-plant mosquito, Wyeomyia smithii, in North America

Resolving postglacial phylogeography using high-throughput sequencing.

Retinoic acid metabolic genes, meiosis, and gonadal sex differentiation in zebrafish

Selection, Linkage, and Population Structure Interact To Shape Genetic Variation Among Threespine Stickleback Genomes

Simulation with RADinitio improves RADseq experimental design and sheds light on sources of missing data

Stacks 2: Analytical methods for paired-end sequencing improve RADseq-based population genomics

Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences ⬇️

Stacks: an analysis tool set for population genomics

The Developmental and Genetic Architecture of the Sexually Selected Male Ornament of Swordtails

The Novel Evolution of the Sperm Whale Genome

The gene history of zebrafish tlr4a and tlr4b is predictive of their divergent functions.

The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits

The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA-sequencing.

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

UDP xylose synthase 1 is required for morphogenesis and histogenesis of the craniofacial skeleton

Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations.

When structure leads to sex: Untangling signals in population genetic data sets

Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard.