Lista de obras - Ilya Borovok - Dominio Público Uruguay

A multidomain fusion protein in Listeria monocytogenes catalyzes the two primary activities for glutathione biosynthesis

artículo científico publicado en 2005

A new perspective on lysogeny: prophages as active regulatory switches of bacteria.

artículo científico publicado en 2015

A sequence-based filtering method for ncRNA identification and its application to searching for riboswitch elements.

artículo científico publicado en 2006

Abundance and diversity of dockerin-containing proteins in the fiber-degrading rumen bacterium, Ruminococcus flavefaciens FD-1.

artículo científico publicado en 2010

Alternative oxygen-dependent and oxygen-independent ribonucleotide reductases in Streptomyces: cross-regulation and physiological role in response to oxygen limitation

artículo científico publicado en 2004

An Extended Cyclic Di-GMP Network in the Predatory Bacterium Bdellovibrio bacteriovorus

artículo científico publicado en 2015

Analysis of transcription of the Staphylococcus aureus aerobic class Ib and anaerobic class III ribonucleotide reductase genes in response to oxygen.

artículo científico publicado en 2001

Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7.

artículo científico publicado en 2016

Bacterial cadherin domains as carbohydrate binding modules: determination of affinity constants to insoluble complex polysaccharides

artículo científico publicado en 2012

Cadherin domains in the polysaccharide-degrading marine bacterium Saccharophagus degradans 2-40 are carbohydrate-binding modules.

artículo científico publicado en 2010

Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus

artículo científico publicado en 2008

Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolytic bacterium Ruminococcus flavefaciens.

artículo científico publicado en 2008

Cellulosomics of the cellulolytic thermophile Clostridium clariflavum

artículo científico publicado en 2014

Cellulosomics, a gene-centric approach to investigating the intraspecific diversity and adaptation of Ruminococcus flavefaciens within the rumen

artículo científico publicado en 2011

Characterization of RAP, a quorum sensing activator of Staphylococcus aureus.

artículo científico publicado en 2003

Clostridium thermocellum cellulosomal genes are regulated by extracytoplasmic polysaccharides via alternative sigma factors.

artículo científico publicado en 2010

Coenzyme B12 controls transcription of the Streptomyces class Ia ribonucleotide reductase nrdABS operon via a riboswitch mechanism

artículo científico publicado en 2006

Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T

artículo científico publicado en 2008

Complexity of the Ruminococcus flavefaciens FD-1 cellulosome reflects an expansion of family-related protein-protein interactions.

artículo científico publicado en 2017

Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens

artículo científico publicado en 2006

Controlled branched-chain amino acids auxotrophy in Listeria monocytogenes allows isoleucine to serve as a host signal and virulence effector. ⬇️

artículo científico publicado en 2018

Coordination of cohabiting phage elements supports bacteria-phage cooperation

artículo científico publicado en 2019

Crystal Structure of an Uncommon Cellulosome-Related Protein Module from Ruminococcus flavefaciens That Resembles Papain-Like Cysteine Peptidases

artículo científico publicado en 2013

Crystallization and preliminary X-ray analysis of a cohesin-like module from AF2375 of the archaeon Archaeoglobus fulgidus.

artículo científico publicado en 2009

Decoding Biomass-Sensing Regulons of Clostridium thermocellum Alternative Sigma-I Factors in a Heterologous Bacillus subtilis Host System.

artículo científico publicado en 2016

Diamide triggers mainly S Thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus.

artículo científico publicado en 2009

Discovery and characterization of cadherin domains in Saccharophagus degradans 2-40.

artículo científico publicado en 2009

Distinctive ligand-binding specificities of tandem PA14 biomass-sensory elements from Clostridium thermocellum and Clostridium clariflavum

scientific article published on 25 June 2019

Distribution and infection-related functions of bacillithiol in Staphylococcus aureus.

artículo científico publicado en 2013

Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1

artículo científico publicado en 2009

Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

artículo científico publicado en 2013

Draft genome sequences for Clostridium thermocellum wild-type strain YS and derived cellulose adhesion-defective mutant strain AD2.

artículo científico publicado en 2012

Faecal Proteases from Pouchitis Patients Activate Protease Activating Receptor-2 to Disrupt the Epithelial Barrier

scientific article published on 01 December 2019

Ferrous active site of isopenicillin N synthase: genetic and sequence analysis of the endogenous ligands

artículo científico publicado en 1996

Fine-structural variance of family 3 carbohydrate-binding modules as extracellular biomass-sensing components of Clostridium thermocellum anti-σI factors

artículo científico publicado en 2014

Functional analysis of the Streptomyces coelicolor NrdR ATP-cone domain: role in nucleotide binding, oligomerization, and DNA interactions.

artículo científico publicado en 2008

Functional phylotyping approach for assessing intraspecific diversity of Ruminococcus albus within the rumen microbiome

artículo científico publicado en 2014

Gene organization in the trxA/B-oriC region of the Streptomyces coelicolor chromosome and comparison with other eubacteria.

artículo científico publicado en 1998

Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays

artículo científico publicado en 2009

Genome-wide analysis of acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system

artículo científico publicado en 2012

Glycoside hydrolases as components of putative carbohydrate biosensor proteins in Clostridium thermocellum

artículo científico publicado en 2010

High Prevalence of Diverse Insertion Sequences within the rRNA Operons of Mycoplasma bovis

artículo científico publicado en 2016

High efficiency of a sequential recombinase-mediated cassette exchange reaction in Escherichia coli

artículo científico publicado en 2010

How does cellulosome composition influence deconstruction of lignocellulosic substrates in Clostridium (Ruminiclostridium) thermocellum DSM 1313?

artículo científico publicado en 2017

Identification and characterization of gshA, a gene encoding the glutamate-cysteine ligase in the halophilic archaeon Haloferax volcanii.

artículo científico publicado en 2009

Implications of the inability of Listeria monocytogenes EGD-e to grow anaerobically due to a deletion in the class III NrdD ribonucleotide reductase for its use as a model laboratory strain

artículo científico publicado en 2011

Integrative genomic analysis identifies isoleucine and CodY as regulators of Listeria monocytogenes virulence

artículo científico publicado en 2012

Near-Complete Genome Sequence of the Cellulolytic Bacterium Bacteroides (Pseudobacteroides) cellulosolvens ATCC 35603

artículo científico publicado en 2015

Noncellulosomal cohesin from the hyperthermophilic archaeon Archaeoglobus fulgidus

artículo científico publicado en 2011

Noncellulosomal cohesin- and dockerin-like modules in the three domains of life.

artículo científico publicado en 2008

Novel ATP-cone-driven allosteric regulation of ribonucleotide reductase via the radical-generating subunit

artículo científico publicado en 2018

NrdR controls differential expression of the Escherichia coli ribonucleotide reductase genes.

artículo científico publicado en 2007

Pan-Cellulosomics of Mesophilic Clostridia: Variations on a Theme

artículo científico publicado en 2017

Pore mutations affecting tetrameric assembly and functioning of the potassium channel KcsA from Streptomyces lividans

artículo científico publicado en 2000

Prophage excision activates Listeria competence genes that promote phagosomal escape and virulence

artículo científico publicado en 2012

Quorum sensing in Staphylococci is regulated via phosphorylation of three conserved histidine residues

artículo científico publicado en 2004

Recent advances in the structure and function of isopenicillin N synthase

artículo científico publicado en 1999

Revisiting the Regulation of the Primary Scaffoldin Gene in Clostridium thermocellum.

artículo científico publicado en 2017

Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains.

artículo científico publicado en 2014

Ruminococcal cellulosome systems from rumen to human.

artículo científico publicado en 2015

Standalone cohesin as a molecular shuttle in cellulosome assembly.

artículo científico publicado en 2015

Staphylococcus aureus ArcR controls expression of the arginine deiminase operon

scientific journal article

Staphylococcus aureus NrdH redoxin is a reductant of the class Ib ribonucleotide reductase

artículo científico publicado en 2010

Streptomyces spp. contain class Ia and class II ribonucleotide reductases: expression analysis of the genes in vegetative growth.

artículo científico publicado en 2002

Structural characterization of a novel autonomous cohesin fromRuminococcus flavefaciens

artículo científico publicado en 2014

Structure and regulation of the cellulose degradome in Clostridium cellulolyticum

artículo científico publicado en 2013

Structure of a family 3a carbohydrate-binding module from the cellulosomal scaffoldin CipA ofClostridium thermocellumwith flanking linkers: implications for cellulosome structure

artículo científico publicado en 2013

Structure-function studies of the non-heme iron active site of isopenicillin N synthase: some implications for catalysis

scientific article published on 01 August 2000

Temperate bacteriophages as regulators of host behavior

artículo científico publicado en 2017

The Streptomyces NrdR transcriptional regulator is a Zn ribbon/ATP cone protein that binds to the promoter regions of class Ia and class II ribonucleotide reductase operons

artículo científico publicado en 2006

The glutamine ligand in the ferrous iron active site of isopenicillin N synthase of Streptomyces jumonjinensis is not essential for catalysis

scientific article published on 01 March 1997

The metabolic regulator CodY links Listeria monocytogenes metabolism to virulence by directly activating the virulence regulatory gene prfA.

artículo científico publicado en 2014

The mycelium-associated Streptomyces reticuli catalase-peroxidase, its gene and regulation by FurS.

artículo científico publicado en 1999

The unique set of putative membrane-associated anti-sigma factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation.

artículo científico publicado en 2010

Three cellulosomal xylanase genes in Clostridium thermocellum are regulated by both vegetative SigA (σ(A)) and alternative SigI6 (σ(I6)) factors.

artículo científico publicado en 2015

Transcriptional regulation of the Staphylococcus aureus thioredoxin and thioredoxin reductase genes in response to oxygen and disulfide stress.

artículo científico publicado en 2004

Transposon Tn5 and its derivatives effectively transpose over a broad temperature range

scientific article published on 01 September 1990

[Formation of covalently-bound circular structures of transposon TnV (Tn5-Rep pSC101) during transposition]

scientific article published on 01 January 1989

[Plasmids of Azospirillum brasilense]

scientific article published on 01 January 1985

[Transposition of the composite synthetic transposon TnV (Tn5-Rep(pSC101)) is accompanied by the formation of the mini-plasmid pTnV, containing defective Is50-elements]

artículo científico publicado en 1990

Lista de obras de Ilya Borovok

A multidomain fusion protein in Listeria monocytogenes catalyzes the two primary activities for glutathione biosynthesis

A new perspective on lysogeny: prophages as active regulatory switches of bacteria.

A sequence-based filtering method for ncRNA identification and its application to searching for riboswitch elements.

Abundance and diversity of dockerin-containing proteins in the fiber-degrading rumen bacterium, Ruminococcus flavefaciens FD-1.

Alternative oxygen-dependent and oxygen-independent ribonucleotide reductases in Streptomyces: cross-regulation and physiological role in response to oxygen limitation

An Extended Cyclic Di-GMP Network in the Predatory Bacterium Bdellovibrio bacteriovorus

Analysis of transcription of the Staphylococcus aureus aerobic class Ib and anaerobic class III ribonucleotide reductase genes in response to oxygen.

Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7.

Bacterial cadherin domains as carbohydrate binding modules: determination of affinity constants to insoluble complex polysaccharides

Cadherin domains in the polysaccharide-degrading marine bacterium Saccharophagus degradans 2-40 are carbohydrate-binding modules.

Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus

Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolytic bacterium Ruminococcus flavefaciens.

Cellulosomics of the cellulolytic thermophile Clostridium clariflavum

Cellulosomics, a gene-centric approach to investigating the intraspecific diversity and adaptation of Ruminococcus flavefaciens within the rumen

Characterization of RAP, a quorum sensing activator of Staphylococcus aureus.

Clostridium thermocellum cellulosomal genes are regulated by extracytoplasmic polysaccharides via alternative sigma factors.

Coenzyme B12 controls transcription of the Streptomyces class Ia ribonucleotide reductase nrdABS operon via a riboswitch mechanism

Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T

Complexity of the Ruminococcus flavefaciens FD-1 cellulosome reflects an expansion of family-related protein-protein interactions.

Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens

Controlled branched-chain amino acids auxotrophy in Listeria monocytogenes allows isoleucine to serve as a host signal and virulence effector. ⬇️

Coordination of cohabiting phage elements supports bacteria-phage cooperation

Crystal Structure of an Uncommon Cellulosome-Related Protein Module from Ruminococcus flavefaciens That Resembles Papain-Like Cysteine Peptidases

Crystallization and preliminary X-ray analysis of a cohesin-like module from AF2375 of the archaeon Archaeoglobus fulgidus.

Decoding Biomass-Sensing Regulons of Clostridium thermocellum Alternative Sigma-I Factors in a Heterologous Bacillus subtilis Host System.

Diamide triggers mainly S Thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus.

Discovery and characterization of cadherin domains in Saccharophagus degradans 2-40.

Distinctive ligand-binding specificities of tandem PA14 biomass-sensory elements from Clostridium thermocellum and Clostridium clariflavum

Distribution and infection-related functions of bacillithiol in Staphylococcus aureus.

Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1

Draft Genome Sequence of the Cellulolytic Bacterium Clostridium papyrosolvens C7 (ATCC 700395)

Draft genome sequences for Clostridium thermocellum wild-type strain YS and derived cellulose adhesion-defective mutant strain AD2.

Faecal Proteases from Pouchitis Patients Activate Protease Activating Receptor-2 to Disrupt the Epithelial Barrier

Ferrous active site of isopenicillin N synthase: genetic and sequence analysis of the endogenous ligands

Fine-structural variance of family 3 carbohydrate-binding modules as extracellular biomass-sensing components of Clostridium thermocellum anti-σI factors

Functional analysis of the Streptomyces coelicolor NrdR ATP-cone domain: role in nucleotide binding, oligomerization, and DNA interactions.

Functional phylotyping approach for assessing intraspecific diversity of Ruminococcus albus within the rumen microbiome

Gene organization in the trxA/B-oriC region of the Streptomyces coelicolor chromosome and comparison with other eubacteria.

Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays

Genome-wide analysis of acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system

Glycoside hydrolases as components of putative carbohydrate biosensor proteins in Clostridium thermocellum

High Prevalence of Diverse Insertion Sequences within the rRNA Operons of Mycoplasma bovis

High efficiency of a sequential recombinase-mediated cassette exchange reaction in Escherichia coli

How does cellulosome composition influence deconstruction of lignocellulosic substrates in Clostridium (Ruminiclostridium) thermocellum DSM 1313?

Identification and characterization of gshA, a gene encoding the glutamate-cysteine ligase in the halophilic archaeon Haloferax volcanii.

Implications of the inability of Listeria monocytogenes EGD-e to grow anaerobically due to a deletion in the class III NrdD ribonucleotide reductase for its use as a model laboratory strain

Integrative genomic analysis identifies isoleucine and CodY as regulators of Listeria monocytogenes virulence

Near-Complete Genome Sequence of the Cellulolytic Bacterium Bacteroides (Pseudobacteroides) cellulosolvens ATCC 35603

Noncellulosomal cohesin from the hyperthermophilic archaeon Archaeoglobus fulgidus

Noncellulosomal cohesin- and dockerin-like modules in the three domains of life.

Novel ATP-cone-driven allosteric regulation of ribonucleotide reductase via the radical-generating subunit

NrdR controls differential expression of the Escherichia coli ribonucleotide reductase genes.

Pan-Cellulosomics of Mesophilic Clostridia: Variations on a Theme

Pore mutations affecting tetrameric assembly and functioning of the potassium channel KcsA from Streptomyces lividans

Prophage excision activates Listeria competence genes that promote phagosomal escape and virulence

Quorum sensing in Staphylococci is regulated via phosphorylation of three conserved histidine residues

Recent advances in the structure and function of isopenicillin N synthase

Revisiting the Regulation of the Primary Scaffoldin Gene in Clostridium thermocellum.

Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains.

Ruminococcal cellulosome systems from rumen to human.

Standalone cohesin as a molecular shuttle in cellulosome assembly.

Staphylococcus aureus ArcR controls expression of the arginine deiminase operon

Staphylococcus aureus NrdH redoxin is a reductant of the class Ib ribonucleotide reductase

Streptomyces spp. contain class Ia and class II ribonucleotide reductases: expression analysis of the genes in vegetative growth.

Structural characterization of a novel autonomous cohesin fromRuminococcus flavefaciens

Structure and regulation of the cellulose degradome in Clostridium cellulolyticum

Structure of a family 3a carbohydrate-binding module from the cellulosomal scaffoldin CipA ofClostridium thermocellumwith flanking linkers: implications for cellulosome structure

Structure-function studies of the non-heme iron active site of isopenicillin N synthase: some implications for catalysis

Temperate bacteriophages as regulators of host behavior

The Streptomyces NrdR transcriptional regulator is a Zn ribbon/ATP cone protein that binds to the promoter regions of class Ia and class II ribonucleotide reductase operons

The glutamine ligand in the ferrous iron active site of isopenicillin N synthase of Streptomyces jumonjinensis is not essential for catalysis

The metabolic regulator CodY links Listeria monocytogenes metabolism to virulence by directly activating the virulence regulatory gene prfA.

The mycelium-associated Streptomyces reticuli catalase-peroxidase, its gene and regulation by FurS.

The unique set of putative membrane-associated anti-sigma factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation.

Three cellulosomal xylanase genes in Clostridium thermocellum are regulated by both vegetative SigA (σ(A)) and alternative SigI6 (σ(I6)) factors.

Transcriptional regulation of the Staphylococcus aureus thioredoxin and thioredoxin reductase genes in response to oxygen and disulfide stress.

Transposon Tn5 and its derivatives effectively transpose over a broad temperature range

[Formation of covalently-bound circular structures of transposon TnV (Tn5-Rep pSC101) during transposition]

[Plasmids of Azospirillum brasilense]