Lista de obras - Douglas Domingues - Dominio Público Uruguay

A Novel Decomposing Model With Evolutionary Algorithms for Feature Selection in Long Non-Coding RNAs

artículo científico publicado en 2020

A novel linkage map of sugarcane with evidence for clustering of retrotransposon-based markers

artículo científico publicado en 2012

An integrated analysis of mRNA and sRNA transcriptional profiles in Coffea arabica L. roots: insights on nitrogen starvation responses

artículo científico publicado en 2018

Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns

artículo científico publicado en 2012

CoffeebEST: an integrated resource for Coffea spp expressed sequence tags.

artículo científico publicado en 2014

Construction and characterization of a BAC library from the Coffea arabica genotype Timor Hybrid CIFC 832/2.

artículo científico publicado en 2013

Decarboxylation mechanisms of C4 photosynthesis in Saccharum spp.: increased PEPCK activity under water-limiting conditions

artículo científico publicado en 2019

Differentially Accumulated Proteins in Coffea arabica Seeds during Perisperm Tissue Development and Their Relationship to Coffee Grain Size.

artículo científico publicado en 2016

Distribution of Divo in Coffea genomes, a poorly described family of angiosperm LTR-Retrotransposons.

artículo científico publicado en 2017

Diterpenes biochemical profile and transcriptional analysis of cytochrome P450s genes in leaves, roots, flowers, and during Coffea arabica L. fruit development.

artículo científico publicado en 2016

Functional annotation and distribution overview of RNA families in 27 Streptococcus agalactiae genomes

Galactinol synthase transcriptional profile in two genotypes of Coffea canephora with contrasting tolerance to drought.

artículo científico publicado en 2015

Gene expression and enzymatic activity of pectin methylesterase during fruit development and ripening in Coffea arabica L.

artículo científico publicado en 2012

Genome-Wide Screening and Characterization of Non-Coding RNAs in Coffea canephora

scientific article published on 11 September 2020

Genome-wide analysis of EgEVE_1, a transcriptionally active endogenous viral element associated to small RNAs in Eucalyptus genomes

artículo científico publicado en 2017

Genome-wide association study reveals candidate genes influencing lipids and diterpenes contents in Coffea arabica L.

artículo científico publicado en 2018

Genome-wide identification, classification and transcriptional analysis of nitrate and ammonium transporters in Coffea.

artículo científico publicado en 2017

Homeologous genes involved in mannitol synthesis reveal unequal contributions in response to abiotic stress in Coffea arabica.

artículo científico publicado en 2014

Identification of potential transcriptionally active Copia LTR retrotransposons in Eucalyptus.

artículo científico publicado en 2011

Identification of the transcriptionally active cytochrome P450 repertoire in Coffea arabica

scientific article published on 27 March 2015

Inpactor, Integrated and Parallel Analyzer and Classifier of LTR Retrotransposons and Its Application for Pineapple LTR Retrotransposons Diversity and Dynamics.

artículo científico publicado en 2018

Low root PIP1-1 and PIP2 aquaporins expression could be related to reduced hydration in 'Rangpur' lime plants exposed to aluminium

scientific article published on 01 February 2020

Low-Copy Genes in Terpenoid Metabolism: The Evolution and Expression of MVK and DXR Genes in Angiosperms

scientific article published on 19 April 2020

MathFeature: feature extraction package for DNA, RNA and protein sequences based on mathematical descriptors

artículo científico publicado en 2021

Mutator System Derivatives Isolated from Sugarcane Genome Sequence

artículo científico publicado en 2012

New mariner elements in Anastrepha species (Diptera: Tephritidae).

artículo científico publicado en 2011

Nitric oxide mediates the hormonal control of Crassulacean acid metabolism expression in young pineapple plants.

artículo científico publicado en 2010

Nitrogen starvation, salt and heat stress in coffee (Coffea arabica L.): identification and validation of new genes for qPCR normalization

artículo científico publicado en 2013

Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants

article

PlaNC-TE: a comprehensive knowledgebase of non-coding RNAs and transposable elements in plants

article

PlanTE-MIR DB: a database for transposable element-related microRNAs in plant genomes.

artículo científico publicado en 2016

Population structure and genetic relationships between Ethiopian and Brazilian Coffea arabica genotypes revealed by SSR markers

scientific article published on 01 April 2019

RNA-Seq differential expression analysis: An extended review and a software tool

artículo científico publicado en 2017

TERL: classification of transposable elements by convolutional neural networks

artículo científico publicado en 2020

Terminal-repeat retrotransposons with GAG domain in plant genomes: a new testimony on the complex world of transposable elements

artículo científico publicado en 2015

The Biotechnology Roadmap for Sugarcane Improvement

The Terrestrial Carnivorous Plant Utricularia reniformis Sheds Light on Environmental and Life-Form Genome Plasticity

scientific article published on 18 December 2019

The accumulation of endogenous proline induces changes in gene expression of several antioxidant enzymes in leaves of transgenic Swingle citrumelo

artículo científico publicado en 2013

Thermoperiod affects the diurnal cycle of nitrate reductase expression and activity in pineapple plants by modulating the endogenous levels of cytokinins

artículo científico publicado en 2009

Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust

scientific article published on 03 January 2020

Transcriptionally active LTR retrotransposons in Eucalyptus genus are differentially expressed and insertionally polymorphic

artículo científico publicado en 2015

Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis

artículo científico publicado en 2017

Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes in leaves and fruits

artículo científico publicado en 2015

ceRNAs in plants: computational approaches and associated challenges for target mimic research

artículo científico

mirtronDB: a mirtron knowledge base

artículo científico publicado en 2019

Lista de obras de Douglas Domingues

A Novel Decomposing Model With Evolutionary Algorithms for Feature Selection in Long Non-Coding RNAs

A novel linkage map of sugarcane with evidence for clustering of retrotransposon-based markers

An integrated analysis of mRNA and sRNA transcriptional profiles in Coffea arabica L. roots: insights on nitrogen starvation responses

Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns

CoffeebEST: an integrated resource for Coffea spp expressed sequence tags.

Construction and characterization of a BAC library from the Coffea arabica genotype Timor Hybrid CIFC 832/2.

Decarboxylation mechanisms of C4 photosynthesis in Saccharum spp.: increased PEPCK activity under water-limiting conditions

Differentially Accumulated Proteins in Coffea arabica Seeds during Perisperm Tissue Development and Their Relationship to Coffee Grain Size.

Distribution of Divo in Coffea genomes, a poorly described family of angiosperm LTR-Retrotransposons.

Diterpenes biochemical profile and transcriptional analysis of cytochrome P450s genes in leaves, roots, flowers, and during Coffea arabica L. fruit development.

Functional annotation and distribution overview of RNA families in 27 Streptococcus agalactiae genomes

Galactinol synthase transcriptional profile in two genotypes of Coffea canephora with contrasting tolerance to drought.

Gene expression and enzymatic activity of pectin methylesterase during fruit development and ripening in Coffea arabica L.

Genome-Wide Screening and Characterization of Non-Coding RNAs in Coffea canephora

Genome-wide analysis of EgEVE_1, a transcriptionally active endogenous viral element associated to small RNAs in Eucalyptus genomes

Genome-wide association study reveals candidate genes influencing lipids and diterpenes contents in Coffea arabica L.

Genome-wide identification, classification and transcriptional analysis of nitrate and ammonium transporters in Coffea.

Homeologous genes involved in mannitol synthesis reveal unequal contributions in response to abiotic stress in Coffea arabica.

Identification of potential transcriptionally active Copia LTR retrotransposons in Eucalyptus.

Identification of the transcriptionally active cytochrome P450 repertoire in Coffea arabica

Inpactor, Integrated and Parallel Analyzer and Classifier of LTR Retrotransposons and Its Application for Pineapple LTR Retrotransposons Diversity and Dynamics.

Low root PIP1-1 and PIP2 aquaporins expression could be related to reduced hydration in 'Rangpur' lime plants exposed to aluminium

Low-Copy Genes in Terpenoid Metabolism: The Evolution and Expression of MVK and DXR Genes in Angiosperms

MathFeature: feature extraction package for DNA, RNA and protein sequences based on mathematical descriptors

Mutator System Derivatives Isolated from Sugarcane Genome Sequence

New mariner elements in Anastrepha species (Diptera: Tephritidae).

Nitric oxide mediates the hormonal control of Crassulacean acid metabolism expression in young pineapple plants.

Nitrogen starvation, salt and heat stress in coffee (Coffea arabica L.): identification and validation of new genes for qPCR normalization

Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants

PlaNC-TE: a comprehensive knowledgebase of non-coding RNAs and transposable elements in plants

PlanTE-MIR DB: a database for transposable element-related microRNAs in plant genomes.

Population structure and genetic relationships between Ethiopian and Brazilian Coffea arabica genotypes revealed by SSR markers

RNA-Seq differential expression analysis: An extended review and a software tool

TERL: classification of transposable elements by convolutional neural networks

Terminal-repeat retrotransposons with GAG domain in plant genomes: a new testimony on the complex world of transposable elements

The Biotechnology Roadmap for Sugarcane Improvement

The Terrestrial Carnivorous Plant Utricularia reniformis Sheds Light on Environmental and Life-Form Genome Plasticity

The accumulation of endogenous proline induces changes in gene expression of several antioxidant enzymes in leaves of transgenic Swingle citrumelo

Thermoperiod affects the diurnal cycle of nitrate reductase expression and activity in pineapple plants by modulating the endogenous levels of cytokinins

Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust

Transcriptionally active LTR retrotransposons in Eucalyptus genus are differentially expressed and insertionally polymorphic

Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis

Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes in leaves and fruits

ceRNAs in plants: computational approaches and associated challenges for target mimic research

mirtronDB: a mirtron knowledge base