Lista de obras - Junfeng Xia - Dominio Público Uruguay

A Sequence-Based Dynamic Ensemble Learning System for Protein Ligand-Binding Site Prediction.

artículo científico publicado en 2015

A meta-analysis of somatic mutations from next generation sequencing of 241 melanomas: a road map for the study of genes with potential clinical relevance

artículo científico publicado en 2014

APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility.

artículo científico publicado en 2010

Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives

artículo científico publicado en 2012

BRAF(L597) mutations in melanoma are associated with sensitivity to MEK inhibitors

artículo científico publicado en 2012

Biomedical data integration, modeling, and simulation in the era of big data and translational medicine

artículo científico publicado en 2014

CINOEDV: a co-information based method for detecting and visualizing n-order epistatic interactions.

artículo científico publicado en 2016

CNNGRN: A Convolutional Neural Network-Based Method for Gene Regulatory Network Inference From Bulk Time-Series Expression Data

artículo científico publicado en 2023

Computational methods for the prediction of protein-protein interactions.

artículo científico publicado en 2010

Concordance between somatic copy number loss and down-regulated expression: A pan-cancer study of cancer predisposition genes.

artículo científico publicado en 2016

Do cancer proteins really interact strongly in the human protein-protein interaction network?

artículo científico publicado en 2011

Efficient ensemble schemes for protein secondary structure prediction.

artículo científico publicado en 2008

Exploiting a reduced set of weighted average features to improve prediction of DNA-binding residues from 3D structures

artículo científico publicado en 2011

Identification of driver pathways in cancer based on combinatorial patterns of somatic gene mutations.

artículo científico publicado en 2015

Identification of mutated driver pathways in cancer using a multi-objective optimization model.

artículo científico publicado en 2016

Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer

artículo científico publicado en 2015

Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome.

artículo científico publicado en 2012

LNDriver: identifying driver genes by integrating mutation and expression data based on gene-gene interaction network.

artículo científico publicado en 2016

MET Exon 14 Skipping in Non-Small Cell Lung Cancer.

artículo científico publicado en 2016

MGDB: a comprehensive database of genes involved in melanoma.

artículo científico publicado en 2015

Mendelian Randomization Using the Druggable Genome Reveals Genetically Supported Drug Targets for Psychiatric Disorders

artículo científico publicado en 2023

NGS catalog: A database of next generation sequencing studies in humans

artículo científico publicado en 2012

Network analysis of gene fusions in human cancer.

artículo científico publicado en 2013

Next-generation sequencing of paired tyrosine kinase inhibitor-sensitive and -resistant EGFR mutant lung cancer cell lines identifies spectrum of DNA changes associated with drug resistance

artículo científico publicado en 2013

OCGene: a database of experimentally verified ovarian cancer-related genes with precomputed regulation information.

artículo científico publicado en 2015

Predicting hot spots in protein interfaces based on protrusion index, pseudo hydrophobicity and electron-ion interaction pseudopotential features.

artículo científico publicado en 2016

Predicting protein-protein interactions from protein sequences using meta predictor

artículo científico publicado en 2010

Prediction of Neuropeptides from Sequence Information Using Ensemble Classifier and Hybrid Features

artículo científico publicado en 2020

Prediction of beta-hairpins in proteins using physicochemical properties and structure information

artículo científico publicado en 2010

Prediction of cancer cell sensitivity to natural products based on genomic and chemical properties.

artículo científico publicado en 2015

Prediction of protein-protein interaction sites by means of ensemble learning and weighted feature descriptor

artículo científico publicado en 2016

Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis

artículo científico publicado en 2013

Sequence-based prediction of protein-protein interactions by means of rotation forest and autocorrelation descriptor.

artículo científico publicado en 2010

dbCID: a manually curated resource for exploring the driver indels in human cancer

artículo científico publicado en 2019

dbCPG: A web resource for cancer predisposition genes

artículo científico publicado en 2016

dbCPM: a manually curated database for exploring the cancer passenger mutations

artículo científico publicado en 2018

dbCRSR: a manually curated database for regulation of cancer radiosensitivity.

artículo científico publicado en 2018

dbDSM: a manually curated database for deleterious synonymous mutations

artículo científico publicado en 2016

Lista de obras de Junfeng Xia

A Sequence-Based Dynamic Ensemble Learning System for Protein Ligand-Binding Site Prediction.

A meta-analysis of somatic mutations from next generation sequencing of 241 melanomas: a road map for the study of genes with potential clinical relevance

APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility.

Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives

BRAF(L597) mutations in melanoma are associated with sensitivity to MEK inhibitors

Biomedical data integration, modeling, and simulation in the era of big data and translational medicine

CINOEDV: a co-information based method for detecting and visualizing n-order epistatic interactions.

CNNGRN: A Convolutional Neural Network-Based Method for Gene Regulatory Network Inference From Bulk Time-Series Expression Data

Computational methods for the prediction of protein-protein interactions.

Concordance between somatic copy number loss and down-regulated expression: A pan-cancer study of cancer predisposition genes.

Do cancer proteins really interact strongly in the human protein-protein interaction network?

Efficient ensemble schemes for protein secondary structure prediction.

Exploiting a reduced set of weighted average features to improve prediction of DNA-binding residues from 3D structures

Identification of driver pathways in cancer based on combinatorial patterns of somatic gene mutations.

Identification of mutated driver pathways in cancer using a multi-objective optimization model.

Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer

Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome.

LNDriver: identifying driver genes by integrating mutation and expression data based on gene-gene interaction network.

MET Exon 14 Skipping in Non-Small Cell Lung Cancer.

MGDB: a comprehensive database of genes involved in melanoma.

Mendelian Randomization Using the Druggable Genome Reveals Genetically Supported Drug Targets for Psychiatric Disorders

NGS catalog: A database of next generation sequencing studies in humans

Network analysis of gene fusions in human cancer.

Next-generation sequencing of paired tyrosine kinase inhibitor-sensitive and -resistant EGFR mutant lung cancer cell lines identifies spectrum of DNA changes associated with drug resistance

OCGene: a database of experimentally verified ovarian cancer-related genes with precomputed regulation information.

Predicting hot spots in protein interfaces based on protrusion index, pseudo hydrophobicity and electron-ion interaction pseudopotential features.

Predicting protein-protein interactions from protein sequences using meta predictor

Prediction of Neuropeptides from Sequence Information Using Ensemble Classifier and Hybrid Features

Prediction of beta-hairpins in proteins using physicochemical properties and structure information

Prediction of cancer cell sensitivity to natural products based on genomic and chemical properties.

Prediction of protein-protein interaction sites by means of ensemble learning and weighted feature descriptor

Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis

Sequence-based prediction of protein-protein interactions by means of rotation forest and autocorrelation descriptor.

dbCID: a manually curated resource for exploring the driver indels in human cancer

dbCPG: A web resource for cancer predisposition genes

dbCPM: a manually curated database for exploring the cancer passenger mutations

dbCRSR: a manually curated database for regulation of cancer radiosensitivity.

dbDSM: a manually curated database for deleterious synonymous mutations