Lista de obras -

A unique H2A histone variant occupies the transcriptional start site of active genes.

artículo científico publicado en 2011

Association of polymorphisms of the estrogen receptor gene with anxiety-related traits in children and adolescents: a longitudinal study.

artículo científico publicado en 2002

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages

scientific article published on 02 November 2018

Comparison of methods for estimating the nucleotide substitution matrix

artículo científico publicado en 2008

Cryptococcus gattii in North American Pacific Northwest: whole-population genome analysis provides insights into species evolution and dispersal

artículo científico publicado en 2014

Detecting coevolution without phylogenetic trees? Tree-ignorant metrics of coevolution perform as well as tree-aware metrics

artículo científico publicado en 2008

Did aculeate silk evolve as an antifouling material?

artículo científico publicado en 2018

Draft Genome of Australian Environmental Strain WM 09.24 of the Opportunistic Human Pathogen Scedosporium aurantiacum

artículo científico publicado en 2015

Dynamic evolution of venom proteins in squamate reptiles ⬇️

artículo científico publicado el 1 de enero de 2012

Estimates of the effect of natural selection on protein-coding content

artículo científico publicado en 2009

Evidence that localized variation in primate sequence divergence arises from an influence of nucleosome placement on DNA repair.

artículo científico publicado en 2009

Expansion of circulating T cells resembling follicular helper T cells is a fixed phenotype that identifies a subset of severe systemic lupus erythematosus

artículo científico publicado en 2010

Exploiting CpG hypermutability to identify phenotypically significant variation within human protein-coding genes

artículo científico publicado en 2011

Folding behavior of four silks of giant honey bee reflects the evolutionary conservation of aculeate silk proteins

artículo científico publicado en 2015

Genetic distance for a general non-stationary markov substitution process

artículo científico publicado en 2015

Genome analysis of the platypus reveals unique signatures of evolution

artículo científico publicado en 2008

Genome analysis of the platypus reveals unique signatures of evolution

artículo científico publicado en 2008

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

artículo científico publicado en 2007

Histone H2A.Z inheritance during the cell cycle and its impact on promoter organization and dynamics.

artículo científico publicado en 2012

Infection with a Virulent Strain of Wolbachia Disrupts Genome Wide-Patterns of Cytosine Methylation in the Mosquito Aedes aegypti

artículo científico publicado en 2013

Loss of ACTN3 gene function alters mouse muscle metabolism and shows evidence of positive selection in humans

scientific journal article

Machine Learning Techniques for Classifying the Mutagenic Origins of Point Mutations

scientific article published on 19 March 2020

Modeling the impact of DNA methylation on the evolution of BRCA1 in mammals

artículo científico publicado en 2004

Modelling and bioinformatics studies of the human Kappa-class glutathione transferase predict a novel third glutathione transferase family with similarity to prokaryotic 2-hydroxychromene-2-carboxylate isomerases

artículo científico publicado en 2004

Multiple-Disease Detection and Classification across Cohorts via Microbiome Search

artículo científico publicado en 2020

Novel and rare functional genomic variants in multiple autoimmune syndrome and Sjögren's syndrome

artículo científico publicado en 2015

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin.

artículo científico publicado en 2018

Pathological rate matrices: from primates to pathogens

artículo científico publicado en 2008

Pitfalls of the most commonly used models of context dependent substitution

artículo científico publicado en 2008

Pitfalls of the most commonly used models of context dependent substitution

artículo científico publicado en 2009

PyCogent: a toolkit for making sense from sequence

artículo científico publicado en 2007

PyEvolve: a toolkit for statistical modelling of molecular evolution

artículo científico publicado en 2004

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME allows analysis of high-throughput community sequencing data

artículo científico publicado en 2010

Quantifying Influences on Intragenomic Mutation Rate

artículo científico publicado en 2020

RCPdb: An evolutionary classification and codon usage database for repeat-containing proteins

artículo científico publicado en 2007

Rates of genome evolution and branching order from whole genome analysis

scientific article published on 09 May 2007

Regional context in the alignment of biological sequence pairs

artículo científico publicado en 2010

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

artículo científico publicado en 2019

Species abundance information improves sequence taxonomy classification accuracy

scientific article published on 11 October 2019

Standard Codon Substitution Models Overestimate Purifying Selection for Nonstationary Data

artículo científico publicado en 2017

Statistical Methods for Identifying Sequence Motifs Affecting Point Mutations

artículo científico

Statistical methods for detecting periodic fragments in DNA sequence data

artículo científico publicado en 2011

The "naked coral" hypothesis revisited--evidence for and against scleractinian monophyly

artículo científico publicado en 2014

The embedding problem for markov models of nucleotide substitution

artículo científico publicado en 2013

Transcriptome sequencing of two phenotypic mosaic Eucalyptus trees reveals large scale transcriptome re-modelling

artículo científico publicado en 2015

Vestige: maximum likelihood phylogenetic footprinting

artículo científico publicado en 2005

Whole exome sequencing of extreme morbid obesity patients: translational implications for obesity and related disorders

artículo científico publicado en 2014

q2-sample-classifier: machine-learning tools for microbiome classification and regression

artículo científico publicado en 2018

redbiom: a Rapid Sample Discovery and Feature Characterization System

scientific article published on 25 June 2019

Lista de obras de

A unique H2A histone variant occupies the transcriptional start site of active genes.

Association of polymorphisms of the estrogen receptor gene with anxiety-related traits in children and adolescents: a longitudinal study.

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages

Comparison of methods for estimating the nucleotide substitution matrix

Cryptococcus gattii in North American Pacific Northwest: whole-population genome analysis provides insights into species evolution and dispersal

Detecting coevolution without phylogenetic trees? Tree-ignorant metrics of coevolution perform as well as tree-aware metrics

Did aculeate silk evolve as an antifouling material?

Draft Genome of Australian Environmental Strain WM 09.24 of the Opportunistic Human Pathogen Scedosporium aurantiacum

Dynamic evolution of venom proteins in squamate reptiles ⬇️

Estimates of the effect of natural selection on protein-coding content

Evidence that localized variation in primate sequence divergence arises from an influence of nucleosome placement on DNA repair.

Expansion of circulating T cells resembling follicular helper T cells is a fixed phenotype that identifies a subset of severe systemic lupus erythematosus

Exploiting CpG hypermutability to identify phenotypically significant variation within human protein-coding genes

Folding behavior of four silks of giant honey bee reflects the evolutionary conservation of aculeate silk proteins

Genetic distance for a general non-stationary markov substitution process

Genome analysis of the platypus reveals unique signatures of evolution

Genome analysis of the platypus reveals unique signatures of evolution

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

Histone H2A.Z inheritance during the cell cycle and its impact on promoter organization and dynamics.

Infection with a Virulent Strain of Wolbachia Disrupts Genome Wide-Patterns of Cytosine Methylation in the Mosquito Aedes aegypti

Loss of ACTN3 gene function alters mouse muscle metabolism and shows evidence of positive selection in humans

Machine Learning Techniques for Classifying the Mutagenic Origins of Point Mutations

Modeling the impact of DNA methylation on the evolution of BRCA1 in mammals

Modelling and bioinformatics studies of the human Kappa-class glutathione transferase predict a novel third glutathione transferase family with similarity to prokaryotic 2-hydroxychromene-2-carboxylate isomerases

Multiple-Disease Detection and Classification across Cohorts via Microbiome Search

Novel and rare functional genomic variants in multiple autoimmune syndrome and Sjögren's syndrome

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin.

Pathological rate matrices: from primates to pathogens

Pitfalls of the most commonly used models of context dependent substitution

Pitfalls of the most commonly used models of context dependent substitution

PyCogent: a toolkit for making sense from sequence

PyEvolve: a toolkit for statistical modelling of molecular evolution

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME allows analysis of high-throughput community sequencing data

Quantifying Influences on Intragenomic Mutation Rate

RCPdb: An evolutionary classification and codon usage database for repeat-containing proteins

Rates of genome evolution and branching order from whole genome analysis

Regional context in the alignment of biological sequence pairs

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Species abundance information improves sequence taxonomy classification accuracy

Standard Codon Substitution Models Overestimate Purifying Selection for Nonstationary Data

Statistical Methods for Identifying Sequence Motifs Affecting Point Mutations

Statistical methods for detecting periodic fragments in DNA sequence data

The "naked coral" hypothesis revisited--evidence for and against scleractinian monophyly

The embedding problem for markov models of nucleotide substitution

Transcriptome sequencing of two phenotypic mosaic Eucalyptus trees reveals large scale transcriptome re-modelling

Vestige: maximum likelihood phylogenetic footprinting

Whole exome sequencing of extreme morbid obesity patients: translational implications for obesity and related disorders

q2-sample-classifier: machine-learning tools for microbiome classification and regression

redbiom: a Rapid Sample Discovery and Feature Characterization System