Lista de obras -

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

artículo científico publicado en 2015

Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility

artículo científico publicado en 2013

Ancient pathogen DNA in archaeological samples detected with a Microbial Detection Array

artículo científico publicado en 2014

Are similarity- or phylogeny-based methods more appropriate for classifying internal transcribed spacer (ITS) metagenomic amplicons? ⬇️

artículo científico publicado el 2 de agosto de 2011

Author Correction: DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient.

artículo científico publicado en 2018

Automated high throughput animal CO1 metabarcode classification.

artículo científico publicado en 2018

COI metabarcoding primer choice affects richness and recovery of indicator taxa in freshwater systems

scientific article published on 12 September 2019

Correction: Factors That Affect Large Subunit Ribosomal DNA Amplicon Sequencing Studies of Fungal Communities: Classification Method, Primer Choice, and Error.

artículo científico publicado en 2012

DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient

artículo científico publicado en 2017

DNA metabarcoding reveals metacommunity dynamics in a threatened boreal wetland wilderness

artículo científico publicado en 2020

Drivers of tropical soil invertebrate community composition and richness across tropical secondary forests using DNA metasystematics

artículo científico publicado en 2020

Environmental filtering of macroinvertebrate traits influences ecosystem functioning in a large river floodplain

artículo científico publicado en 2022

Factors that affect large subunit ribosomal DNA amplicon sequencing studies of fungal communities: classification method, primer choice, and error ⬇️

artículo científico publicado el 27 de abril de 2012

Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences

artículo científico publicado en 2012

Freshwater diatom biomonitoring through benthic kick-net metabarcoding

artículo científico publicado en 2020

Fruiting body and soil rDNA sampling detects complementary assemblage of Agaricomycotina (Basidiomycota, Fungi) in a hemlock-dominated forest plot in southern Ontario

artículo científico publicado en 2008

Improving ITS sequence data for identification of plant pathogenic fungi

article

Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

artículo científico publicado en 2015

Molecular phylogeny of the Blastocladiomycota (Fungi) based on nuclear ribosomal DNA.

artículo científico publicado en 2011

Over 2.5 million COI sequences in GenBank and growing

artículo científico publicado en 2018

Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets

artículo científico publicado en 2021

Rapid and accurate taxonomic classification of insect (class Insecta) cytochromecoxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier

article by Teresita M Porter et al published March 2014 in Molecular Ecology Resources

Rapid degradation of Deepwater Horizon spilled oil by indigenous microbial communities in Louisiana saltmarsh sediments

artículo científico publicado en 2013

Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas

artículo científico publicado en 2016

Scaling up: A guide to high throughput genomic approaches for biodiversity analysis

artículo científico publicado en 2018

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

artículo científico publicado en 2014

Structure, function, and phylogeny of the mating locus in the Rhizopus oryzae complex

artículo científico publicado en 2010

The Ecobiomics project: Advancing metagenomics assessment of soil health and freshwater quality in Canada

scientific article published on 05 December 2019

The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods

artículo científico publicado en 2006

Variations in terrestrial arthropod DNA metabarcoding methods recovers robust beta diversity but variable richness and site indicators

scientific article published on 03 December 2019

Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples

scientific article published on 12 December 2019

Lista de obras de

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility

Ancient pathogen DNA in archaeological samples detected with a Microbial Detection Array

Are similarity- or phylogeny-based methods more appropriate for classifying internal transcribed spacer (ITS) metagenomic amplicons? ⬇️

Author Correction: DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient.

Automated high throughput animal CO1 metabarcode classification.

COI metabarcoding primer choice affects richness and recovery of indicator taxa in freshwater systems

Correction: Factors That Affect Large Subunit Ribosomal DNA Amplicon Sequencing Studies of Fungal Communities: Classification Method, Primer Choice, and Error.

DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient

DNA metabarcoding reveals metacommunity dynamics in a threatened boreal wetland wilderness

Drivers of tropical soil invertebrate community composition and richness across tropical secondary forests using DNA metasystematics

Environmental filtering of macroinvertebrate traits influences ecosystem functioning in a large river floodplain

Factors that affect large subunit ribosomal DNA amplicon sequencing studies of fungal communities: classification method, primer choice, and error ⬇️

Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences

Freshwater diatom biomonitoring through benthic kick-net metabarcoding

Fruiting body and soil rDNA sampling detects complementary assemblage of Agaricomycotina (Basidiomycota, Fungi) in a hemlock-dominated forest plot in southern Ontario

Improving ITS sequence data for identification of plant pathogenic fungi

Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

Molecular phylogeny of the Blastocladiomycota (Fungi) based on nuclear ribosomal DNA.

Over 2.5 million COI sequences in GenBank and growing

Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets

Rapid and accurate taxonomic classification of insect (class Insecta) cytochromecoxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier

Rapid degradation of Deepwater Horizon spilled oil by indigenous microbial communities in Louisiana saltmarsh sediments

Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas

Scaling up: A guide to high throughput genomic approaches for biodiversity analysis

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

Structure, function, and phylogeny of the mating locus in the Rhizopus oryzae complex

The Ecobiomics project: Advancing metagenomics assessment of soil health and freshwater quality in Canada

The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods

Variations in terrestrial arthropod DNA metabarcoding methods recovers robust beta diversity but variable richness and site indicators

Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples