Lista de obras -

A Mobile Element in mutS Drives Hypermutation in a Marine Vibrio

scientific article published on 07 February 2017

A Reverse Ecology Approach Based on a Biological Definition of Microbial Populations

scientific article published on 01 August 2019

A Small Number of Phylogenetically Distinct Clonal Complexes Dominate a Coastal Vibrio cholerae Population.

artículo científico publicado en 2016

A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior.

artículo científico publicado en 2016

A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria.

artículo científico publicado en 2018

A simple and efficient method for concentration of ocean viruses by chemical flocculation

artículo científico publicado en 2011

A simple method for quantification of uncultured microorganisms in the environment based on in vitro transcription of 16S rRNA.

artículo científico publicado en 1997

A supervised learning approach for taxonomic classification of core-photosystem-II genes and transcripts in the marine environment

artículo científico publicado en 2009

A(r)Ray of hope in analysis of the function and diversity of microbial communities.

artículo científico publicado en 2003

ACID: annotation of cassette and integron data

artículo científico publicado en 2009

Accurate Quantification of Laminarin in Marine Organic Matter with Enzymes from Marine Microbes.

artículo científico publicado en 2017

Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data

artículo científico publicado en 2006

Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas

artículo científico publicado en 2007

Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes

artículo científico publicado en 2016

Ancestral gene acquisition as the key to virulence potential in environmental Vibrio populations

artículo científico publicado en 2018

Associations and dynamics of Vibrionaceae in the environment, from the genus to the population level

artículo científico publicado en 2014

Bacterial community structure in a sympagic habitat expanding with global warming: brackish ice brine at 85–90 °N

article

Bacterial evolution: Genomics of metabolic trade-offs

artículo científico publicado en 2016

Bias in template-to-product ratios in multitemplate PCR

artículo científico publicado en 1998

Binding of harvested bacterial exopolymers to the surface of calcite.

artículo científico publicado en 2005

Chemoautotrophic, sulfur-oxidizing symbiotic bacteria on marine nematodes: Morphological and biochemical characterization

scientific article published on 01 November 1992

Coastal Bacterial Community Response to Glacier Melting in the Western Antarctic Peninsula

artículo científico publicado en 2021

Colonization dynamics of altered Schaedler flora is influenced by gender, aging, and Helicobacter hepaticus infection in the intestines of Swiss Webster mice

artículo científico publicado en 2006

Comparative biochemical characterization of three exolytic oligoalginate lyases from Vibrio splendidus reveals complementary substrate scope, temperature, and pH adaptations.

artículo científico publicado en 2014

Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits

artículo científico

Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations

artículo científico publicado en 2014

Conservation of the chitin utilization pathway in the Vibrionaceae

artículo científico publicado en 2008

Culture-independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population

artículo científico publicado en 2020

DNA phosphorothioation is widespread and quantized in bacterial genomes.

artículo científico publicado en 2011

Diarrhoeal events can trigger long-term Clostridium difficile colonization with recurrent blooms

scientific article published on 10 February 2020

Direct single-cell biomass estimates for marine bacteria via Archimedes' principle

artículo científico publicado en 2016

Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.

artículo científico publicado en 2004

Diversity and dynamics of a north atlantic coastal Vibrio community.

artículo científico publicado en 2004

Diversity and heterogeneity of epibiotic bacterial communities on the marine nematode Eubostrichus dianae

artículo científico publicado en 1999

Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts

artículo científico publicado en 2010

Diversity, Sources, and Detection of Human Bacterial Pathogens in the Marine Environment

Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site

artículo científico publicado en 1995

Eco-Evolutionary Dynamics of Episomes among Ecologically Cohesive Bacterial Populations

artículo científico publicado en 2015

Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance.

artículo científico publicado en 2012

Effect of naklofen, alcohol and naklofen administered simultaneously with alcohol on transaminase levels

artículo científico publicado en 1996

Effects of temperature and salinity on Vibrio vulnificus population dynamics as assessed by quantitative PCR.

artículo científico publicado en 2004

Endemicity of the cosmopolitan mesophilic chemolithoautotroph Sulfurimonas at deep-sea hydrothermal vents

artículo científico publicado en 2017

Endosymbionts escape dead hydrothermal vent tubeworms to enrich the free-living population

artículo científico publicado en 2015

Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity

artículo científico publicado en 2006

Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium.

artículo científico publicado en 2016

Evolution of a Vegetarian Vibrio: Metabolic Specialization of Vibrio breoganii to Macroalgal Substrates

scientific article published on 10 July 2018

Explaining microbial genomic diversity in light of evolutionary ecology

artículo científico publicado en 2014

Exploiting fine-scale genetic and physiological variation of closely related microbes to reveal unknown enzyme functions

artículo científico publicado en 2017

Extensive variation in intracellular symbiont community composition among members of a single population of the wood-boring bivalve Lyrodus pedicellatus (Bivalvia: Teredinidae).

artículo científico publicado en 2006

Fine-scale phylogenetic architecture of a complex bacterial community.

artículo científico publicado en 2004

Function and functional redundancy in microbial systems

scientific article published on 16 April 2018

Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity

artículo científico publicado en 2009

Genomic Features for Desiccation Tolerance and Sugar Biosynthesis in the Extremophile sp. UTEX B3054

artículo científico publicado en 2019

Genotypic diversity within a natural coastal bacterioplankton population.

artículo científico publicado en 2005

Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR'

artículo científico publicado en 2002

High frequency of a novel filamentous phage, VCY φ, within an environmental Vibrio cholerae population

artículo científico publicado en 2012

High overall diversity and dominance of microdiverse relationships in salt marsh sulphate-reducing bacteria

artículo científico publicado en 2004

High resolution time series reveals cohesive but short-lived communities in coastal plankton

artículo científico publicado en 2018

Horizontal gene transfer and the evolution of bacterial and archaeal population structure

artículo científico publicado en 2013

How can microbial population genomics inform community ecology?

artículo científico publicado en 2020

Illuminating reactive microbial transport in saturated porous media: demonstration of a visualization method and conceptual transport model.

artículo científico publicado en 2005

Importance of Xanthobacter autotrophicus in toluene biodegradation within a contaminated stream

artículo científico publicado en 1999

Inter-individual variability in copepod microbiomes reveals bacterial networks linked to host physiology

artículo científico publicado en 2018

Interactions in self-assembled microbial communities saturate with diversity

scientific article published on 26 February 2019

Local mobile gene pools rapidly cross species boundaries to create endemicity within global Vibrio cholerae populations

artículo científico publicado en 2011

Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria

scientific article published on 29 October 2019

Merging Taxonomy with Ecological Population Prediction in a Case Study of Vibrionaceae ⬇️

artículo científico publicado el 26 de agosto de 2011

Metapopulation structure of Vibrionaceae among coastal marine invertebrates.

artículo científico publicado en 2010

Microbial Speciation

artículo científico

Microbial community assembly and evolution in subseafloor sediment.

artículo científico publicado en 2017

Microbial interactions lead to rapid micro-scale successions on model marine particles

artículo científico publicado en 2016

Microbial taxonomy in the post-genomic era: rebuilding from scratch?

artículo científico publicado en 2014

Natural resource landscapes of a marine bacterium reveal distinct fitness-determining genes across the genome.

artículo científico publicado en 2017

O-antigen diversity and lateral transfer of the wbe region among Vibrio splendidus isolates.

artículo científico publicado en 2010

Ordering microbial diversity into ecologically and genetically cohesive units

artículo científico publicado en 2014

Oysters and Vibrios as a Model for Disease Dynamics in Wild Animals.

artículo científico publicado en 2016

PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample.

artículo científico publicado en 2005

Patterns and mechanisms of genetic and phenotypic differentiation in marine microbes

artículo científico publicado en 2006

Phage–host coevolution in natural populations

Phylogenetic Relationships of the Filamentous Sulfur Bacterium Thiothrix ramosa Based on 16S rRNA Sequence Analysis

artículo científico publicado en 1996

Phylogenetic analysis of a highly specific association between ectosymbiotic, sulfur-oxidizing bacteria and a marine nematode

artículo científico publicado en 1994

Physiological and gene expression responses to nitrogen regimes and temperatures in Mastigocladus sp. strain CHP1, a predominant thermotolerant cyanobacterium of hot springs

artículo científico publicado en 2016

Polyclonal symbiont populations in hydrothermal vent tubeworms and the environment

artículo científico publicado en 2019

Polyphyly of non‐bioluminescent Vibrio fischeri sharing a lux‐locus deletion ⬇️

artículo científico publicado el 9 de octubre de 2011

Population Dynamics of Two Toluene Degrading Bacterial Species in a Contaminated Stream.

artículo científico publicado en 2001

Population genomics of early events in the ecological differentiation of bacteria.

artículo científico publicado en 2012

Population genomics of the symbiotic plasmids of sympatric nitrogen-fixing Rhizobium species associated with Phaseolus vulgaris

artículo científico publicado en 2016

Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations ⬇️

artículo científico publicado el 19 de noviembre de 2012

Rapid and simple method for the most-probable-number estimation of arsenic-reducing bacteria.

artículo científico publicado en 2001

Rapid chemotactic response enables marine bacteria to exploit ephemeral microscale nutrient patches

artículo científico publicado en 2008

Redox-informed models of global biogeochemical cycles

scientific article published on 10 November 2020

Reproducibility of Vibrionaceae population structure in coastal bacterioplankton.

artículo científico publicado en 2012

Resolving the structure of phage-bacteria interactions in the context of natural diversity

artículo científico publicado en 2022

Resource partitioning and sympatric differentiation among closely related bacterioplankton.

artículo científico publicado en 2008

Sequencing-independent method to generate oligonucleotide probes targeting a variable region in bacterial 16S rRNA by PCR with detachable primers.

artículo científico publicado en 2002

Shape and evolution of the fundamental niche in marine Vibrio

artículo científico publicado en 2012

Solar disinfection (SODIS): simulation of solar radiation for global assessment and application for point-of-use water treatment in Haiti.

artículo científico publicado en 2003

Spatial distribution and stability of the eight microbial species of the altered schaedler flora in the mouse gastrointestinal tract

artículo científico publicado en 2004

Streamlining standard bacteriophage methods for higher throughput

artículo científico publicado en 2018

Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years

artículo científico publicado en 2021

The coastal environment and human health: microbial indicators, pathogens, sentinels and reservoirs

artículo científico publicado en 2008

The genetic law of the minimum

artículo científico publicado en 2020

Two new Mycobacterium strains and their role in toluene degradation in a contaminated stream.

artículo científico publicado en 1998

Using Colonization Assays and Comparative Genomics To Discover Symbiosis Behaviors and Factors in Vibrio fischeri

artículo científico publicado en 2020

Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan

artículo científico publicado en 2020

Vibrio chromosomes share common history

artículo científico publicado en 2010

Vibrio crassostreae, a benign oyster colonizer turned into a pathogen after plasmid acquisition.

artículo científico publicado en 2016

Vibrio metoecus sp. nov., a close relative of Vibrio cholerae isolated from coastal brackish ponds and clinical specimens.

artículo científico publicado en 2014

Viruses of the Nahant Collection, characterization of 251 marine Vibrionaceae viruses.

artículo científico publicado en 2018

Widespread distribution of prophage-encoded virulence factors in marine Vibrio communities.

artículo científico publicado en 2018

Lista de obras de

A Mobile Element in mutS Drives Hypermutation in a Marine Vibrio

A Reverse Ecology Approach Based on a Biological Definition of Microbial Populations

A Small Number of Phylogenetically Distinct Clonal Complexes Dominate a Coastal Vibrio cholerae Population.

A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior.

A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria.

A simple and efficient method for concentration of ocean viruses by chemical flocculation

A simple method for quantification of uncultured microorganisms in the environment based on in vitro transcription of 16S rRNA.

A supervised learning approach for taxonomic classification of core-photosystem-II genes and transcripts in the marine environment

A(r)Ray of hope in analysis of the function and diversity of microbial communities.

ACID: annotation of cassette and integron data

Accurate Quantification of Laminarin in Marine Organic Matter with Enzymes from Marine Microbes.

Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data

Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas

Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes

Ancestral gene acquisition as the key to virulence potential in environmental Vibrio populations

Associations and dynamics of Vibrionaceae in the environment, from the genus to the population level

Bacterial community structure in a sympagic habitat expanding with global warming: brackish ice brine at 85–90 °N

Bacterial evolution: Genomics of metabolic trade-offs

Bias in template-to-product ratios in multitemplate PCR

Binding of harvested bacterial exopolymers to the surface of calcite.

Chemoautotrophic, sulfur-oxidizing symbiotic bacteria on marine nematodes: Morphological and biochemical characterization

Coastal Bacterial Community Response to Glacier Melting in the Western Antarctic Peninsula

Colonization dynamics of altered Schaedler flora is influenced by gender, aging, and Helicobacter hepaticus infection in the intestines of Swiss Webster mice

Comparative biochemical characterization of three exolytic oligoalginate lyases from Vibrio splendidus reveals complementary substrate scope, temperature, and pH adaptations.

Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits

Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations

Conservation of the chitin utilization pathway in the Vibrionaceae

Culture-independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population

DNA phosphorothioation is widespread and quantized in bacterial genomes.

Diarrhoeal events can trigger long-term Clostridium difficile colonization with recurrent blooms

Direct single-cell biomass estimates for marine bacteria via Archimedes' principle

Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.

Diversity and dynamics of a north atlantic coastal Vibrio community.

Diversity and heterogeneity of epibiotic bacterial communities on the marine nematode Eubostrichus dianae

Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts

Diversity, Sources, and Detection of Human Bacterial Pathogens in the Marine Environment

Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site

Eco-Evolutionary Dynamics of Episomes among Ecologically Cohesive Bacterial Populations

Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance.

Effect of naklofen, alcohol and naklofen administered simultaneously with alcohol on transaminase levels

Effects of temperature and salinity on Vibrio vulnificus population dynamics as assessed by quantitative PCR.

Endemicity of the cosmopolitan mesophilic chemolithoautotroph Sulfurimonas at deep-sea hydrothermal vents

Endosymbionts escape dead hydrothermal vent tubeworms to enrich the free-living population

Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity

Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium.

Evolution of a Vegetarian Vibrio: Metabolic Specialization of Vibrio breoganii to Macroalgal Substrates

Explaining microbial genomic diversity in light of evolutionary ecology

Exploiting fine-scale genetic and physiological variation of closely related microbes to reveal unknown enzyme functions

Extensive variation in intracellular symbiont community composition among members of a single population of the wood-boring bivalve Lyrodus pedicellatus (Bivalvia: Teredinidae).

Fine-scale phylogenetic architecture of a complex bacterial community.

Function and functional redundancy in microbial systems

Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity

Genomic Features for Desiccation Tolerance and Sugar Biosynthesis in the Extremophile sp. UTEX B3054

Genotypic diversity within a natural coastal bacterioplankton population.

Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR'

High frequency of a novel filamentous phage, VCY φ, within an environmental Vibrio cholerae population

High overall diversity and dominance of microdiverse relationships in salt marsh sulphate-reducing bacteria

High resolution time series reveals cohesive but short-lived communities in coastal plankton

Horizontal gene transfer and the evolution of bacterial and archaeal population structure

How can microbial population genomics inform community ecology?

Illuminating reactive microbial transport in saturated porous media: demonstration of a visualization method and conceptual transport model.

Importance of Xanthobacter autotrophicus in toluene biodegradation within a contaminated stream

Inter-individual variability in copepod microbiomes reveals bacterial networks linked to host physiology

Interactions in self-assembled microbial communities saturate with diversity

Local mobile gene pools rapidly cross species boundaries to create endemicity within global Vibrio cholerae populations

Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria

Merging Taxonomy with Ecological Population Prediction in a Case Study of Vibrionaceae ⬇️

Metapopulation structure of Vibrionaceae among coastal marine invertebrates.

Microbial Speciation

Microbial community assembly and evolution in subseafloor sediment.

Microbial interactions lead to rapid micro-scale successions on model marine particles

Microbial taxonomy in the post-genomic era: rebuilding from scratch?

Natural resource landscapes of a marine bacterium reveal distinct fitness-determining genes across the genome.

O-antigen diversity and lateral transfer of the wbe region among Vibrio splendidus isolates.

Ordering microbial diversity into ecologically and genetically cohesive units

Oysters and Vibrios as a Model for Disease Dynamics in Wild Animals.

PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample.

Patterns and mechanisms of genetic and phenotypic differentiation in marine microbes

Phage–host coevolution in natural populations