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A Simple Standard for Ontological Mappings 2022: Updates of data model and outlook ⬇️

Conference paper

A Simple Standard for Sharing Ontological Mappings (SSSOM)

artículo científico publicado en 2022

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review

artículo científico publicado en 2002

Apollo: Democratizing genome annotation

artículo científico publicado en 2019

Apollo: a community resource for genome annotation editing

artículo científico publicado en 2009

BOSC 2019, the 20th annual Bioinformatics Open Source Conference

artículo científico publicado en 2019

BOSC 2021, the 22nd Annual Bioinformatics Open Source Conference

artículo científico publicado en 2021

BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference

artículo científico publicado en 2022

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science ⬇️

artículo científico publicado en 2022

Community-driven development for computational biology at Sprints, Hackathons and Codefests

artículo científico publicado en 2014

Efficient Classification of Massive, Unsegmented Datastreams

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources

article by Sebastian Köhler et al published 8 January 2019 in Nucleic Acids Research

Genotator: A Workbench for Sequence Annotation ⬇️

artículo científico publicado el 1 de julio de 1997

How many rare diseases are there?

artículo científico publicado en 2020

KBase: The United States Department of Energy Systems Biology Knowledgebase

article

KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response

artículo científico publicado en 2020

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

artículo científico publicado en 2020

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

artículo científico publicado en 2020

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

preprint published in 2023

KG-Hub—building and exchanging biological knowledge graphs

artículo científico publicado en 2023

Mondo: Unifying diseases for the world, by the world

NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study

artículo científico publicado en 2022

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

artículo científico publicado en 2021

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies

preprint published on 06 July 2022

Progress toward a universal biomedical data translator

publication published in 2022

ROBOT: A Tool for Automating Ontology Workflows

artículo científico publicado en 2019

Reconstruction and Analysis of Central Metabolism in Microbes.

artículo científico publicado en 2018

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

artículo científico publicado en 2024

The 2015 Bioinformatics Open Source Conference (BOSC 2015)

artículo científico publicado en 2016

The 2016 Bioinformatics Open Source Conference (BOSC)

artículo científico publicado en 2016

The 2017 Bioinformatics Open Source Conference (BOSC).

artículo científico publicado en 2017

The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018)

artículo científico publicado en 2018

The 21st annual Bioinformatics Open Source Conference (BOSC 2020, part of BCC2020)

scientific article published on 21 September 2020

The Bioinformatics Open Source Conference (BOSC) 2013

artículo científico publicado en 2015

The Bioinformatics Open Source Conference (BOSC) 2013

The Gene Ontology knowledgebase in 2023

scientific article published in 2023

The Human Phenotype Ontology in 2021

artículo científico publicado en 2020

The Human Phenotype Ontology in 2024: phenotypes around the world

artículo científico publicado en 2023

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species

artículo científico publicado en 2020

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences

The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution

scientific article published on 28 March 2019

The case for open science: rare diseases

artículo científico publicado en 2020

Using Apollo to browse and edit genome annotations

artículo científico publicado en 2006

Using KBase to Assemble and Annotate Prokaryotic Genomes

artículo científico

Lista de obras de

A Simple Standard for Ontological Mappings 2022: Updates of data model and outlook ⬇️

A Simple Standard for Sharing Ontological Mappings (SSSOM)

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review

Apollo: Democratizing genome annotation

Apollo: Democratizing genome annotation

Apollo: a community resource for genome annotation editing

BOSC 2019, the 20th annual Bioinformatics Open Source Conference

BOSC 2021, the 22nd Annual Bioinformatics Open Source Conference

BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science ⬇️

Community-driven development for computational biology at Sprints, Hackathons and Codefests

Efficient Classification of Massive, Unsegmented Datastreams

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources

Genotator: A Workbench for Sequence Annotation ⬇️

How many rare diseases are there?

KBase: The United States Department of Energy Systems Biology Knowledgebase

KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

KG-Hub—building and exchanging biological knowledge graphs

Mondo: Unifying diseases for the world, by the world

NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies

Progress toward a universal biomedical data translator

ROBOT: A Tool for Automating Ontology Workflows

Reconstruction and Analysis of Central Metabolism in Microbes.

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

The 2015 Bioinformatics Open Source Conference (BOSC 2015)

The 2016 Bioinformatics Open Source Conference (BOSC)

The 2017 Bioinformatics Open Source Conference (BOSC).

The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018)

The 21st annual Bioinformatics Open Source Conference (BOSC 2020, part of BCC2020)

The Bioinformatics Open Source Conference (BOSC) 2013

The Bioinformatics Open Source Conference (BOSC) 2013

The Gene Ontology knowledgebase in 2023

The Human Phenotype Ontology in 2021

The Human Phenotype Ontology in 2024: phenotypes around the world

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences

The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution

The case for open science: rare diseases

Using Apollo to browse and edit genome annotations

Using KBase to Assemble and Annotate Prokaryotic Genomes