Lista de obras -

A genome triplication associated with early diversification of the core eudicots

artículo científico publicado en 2012

A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).

artículo científico

A transcriptome screen for positive selection in domesticated breadfruit and its wild relatives (Artocarpus spp.).

scientific article published on 01 May 2018

Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus

scientific article published on 01 March 2018

Ancestral polyploidy in seed plants and angiosperms

artículo científico publicado en 2011

Application of qRT-PCR and RNA-Seq analysis for the identification of housekeeping genes useful for normalization of gene expression values during Striga hermonthica development.

artículo científico publicado en 2012

Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies.

artículo científico publicado en 2013

Data access for the 1,000 Plants (1KP) project

artículo científico publicado en 2014

De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum

artículo científico publicado en 2011

Distribution and evolution of pseudogenes, gene losses, and a gene rearrangement in the plastid genome of the nonphotosynthetic liverwort, Aneura mirabilis (Metzgeriales, Jungermanniopsida).

artículo científico publicado en 2008

Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta)

artículo científico publicado en 2007

Evolutionary dynamism in bryophytes: Phylogenomic inferences confirm rapid radiation in the moss family Funariaceae

artículo científico publicado en 2017

Examining the efficacy of a genotyping-by-sequencing technique for population genetic analysis of the mushroom Laccaria bicolor and evaluating whether a reference genome is necessary to assess homology

artículo científico publicado en 2014

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

artículo científico publicado en 2021

Exploring Angiosperms353: Developing and applying a universal toolkit for flowering plant phylogenomics

artículo científico publicado en 2021

Frequent pseudogenization and loss of the plastid-encoded sulfate-transport gene cysA throughout the evolution of liverworts.

artículo científico publicado en 2011

Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis

artículo científico publicado en 2008

Functional genomics of a generalist parasitic plant: laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression.

artículo científico publicado en 2013

HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment

artículo científico publicado en 2016

Low-coverage, whole-genome sequencing of Artocarpus camansi (Moraceae) for phylogenetic marker development and gene discovery

artículo científico publicado en 2016

Mechanisms of functional and physical genome reduction in photosynthetic and nonphotosynthetic parasitic plants of the broomrape family

artículo científico publicado en 2013

Methods for exploring the plant tree of life.

artículo científico publicado en 2018

Phylogenomic analysis of transcriptome data elucidates co-occurrence of a paleopolyploid event and the origin of bimodal karyotypes in Agavoideae (Asparagaceae).

artículo científico publicado en 2012

Phylogenomic delineation of Physcomitrium (Bryophyta: Funariaceae) based on targeted sequencing of nuclear exons and their flanking regions rejects the retention of Physcomitrella , Physcomitridium and Aphanorrhegma ⬇️

artículo científico publicado en 2019

Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)

artículo científico publicado en 2018

Phylotranscriptomic analysis of the origin and early diversification of land plants

artículo científico publicado en 2014

Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta).

artículo científico publicado en 2018

Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes

scientific article published on 02 April 2019

Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome.

artículo científico publicado en 2016

Sequencing and Analyzing the Transcriptomes of a Thousand Species Across the Tree of Life for Green Plants

artículo científico publicado en 2019

Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta).

artículo científico publicado en 2017

The TvPirin gene is necessary for haustorium development in the parasitic plant Triphysaria versicolor

artículo científico publicado en 2011

The uncharacterized gene EVE contributes to vessel element dimensions in Populus

scientific article published on 10 February 2020

Transcriptomes of the Parasitic Plant Family Orobanchaceae Reveal Surprising Conservation of Chlorophyll Synthesis ⬇️

artículo científico publicado el 8 de diciembre de 2011

Transcriptomic Insights into the Life History of Bolidophytes, the Sister Lineage to Diatoms.

artículo científico publicado en 2014

Lista de obras de

A genome triplication associated with early diversification of the core eudicots

A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).

A transcriptome screen for positive selection in domesticated breadfruit and its wild relatives (Artocarpus spp.).

Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus

Ancestral polyploidy in seed plants and angiosperms

Application of qRT-PCR and RNA-Seq analysis for the identification of housekeeping genes useful for normalization of gene expression values during Striga hermonthica development.

Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies.

Data access for the 1,000 Plants (1KP) project

De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum

Distribution and evolution of pseudogenes, gene losses, and a gene rearrangement in the plastid genome of the nonphotosynthetic liverwort, Aneura mirabilis (Metzgeriales, Jungermanniopsida).

Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta)

Evolutionary dynamism in bryophytes: Phylogenomic inferences confirm rapid radiation in the moss family Funariaceae

Examining the efficacy of a genotyping-by-sequencing technique for population genetic analysis of the mushroom Laccaria bicolor and evaluating whether a reference genome is necessary to assess homology

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

Exploring Angiosperms353: Developing and applying a universal toolkit for flowering plant phylogenomics

Frequent pseudogenization and loss of the plastid-encoded sulfate-transport gene cysA throughout the evolution of liverworts.

Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis

Functional genomics of a generalist parasitic plant: laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression.

HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment

Low-coverage, whole-genome sequencing of Artocarpus camansi (Moraceae) for phylogenetic marker development and gene discovery

Mechanisms of functional and physical genome reduction in photosynthetic and nonphotosynthetic parasitic plants of the broomrape family

Methods for exploring the plant tree of life.

Phylogenomic analysis of transcriptome data elucidates co-occurrence of a paleopolyploid event and the origin of bimodal karyotypes in Agavoideae (Asparagaceae).

Phylogenomic delineation of Physcomitrium (Bryophyta: Funariaceae) based on targeted sequencing of nuclear exons and their flanking regions rejects the retention of Physcomitrella , Physcomitridium and Aphanorrhegma ⬇️

Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)

Phylotranscriptomic analysis of the origin and early diversification of land plants

Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta).

Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes

Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome.

Sequencing and Analyzing the Transcriptomes of a Thousand Species Across the Tree of Life for Green Plants

Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta).

The TvPirin gene is necessary for haustorium development in the parasitic plant Triphysaria versicolor

The uncharacterized gene EVE contributes to vessel element dimensions in Populus

Transcriptomes of the Parasitic Plant Family Orobanchaceae Reveal Surprising Conservation of Chlorophyll Synthesis ⬇️

Transcriptomic Insights into the Life History of Bolidophytes, the Sister Lineage to Diatoms.