Lista de obras - Gianluca Bontempi - Dominio Público Uruguay

4-IBP, a sigma1 receptor agonist, decreases the migration of human cancer cells, including glioblastoma cells, in vitro and sensitizes them in vitro and in vivo to cytotoxic insults of proapoptotic and proautophagic drugs

artículo científico publicado en 2007

A comparative study of survival models for breast cancer prognostication based on microarray data: does a single gene beat them all?

artículo científico publicado en 2008

A comprehensive overview of Infinium HumanMethylation450 data processing

artículo científico publicado en 2013

A fuzzy gene expression-based computational approach improves breast cancer prognostication

artículo científico publicado en 2010

A technological platform for cerebral palsy - the ICT4Rehab project

artículo científico publicado en 2013

A three-gene model to robustly identify breast cancer molecular subtypes

artículo científico publicado en 2012

Association between the PNPLA3 (rs738409 C>G) variant and hepatocellular carcinoma: Evidence from a meta-analysis of individual participant data

artículo científico publicado en 2014

Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes

article published in 2008

CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation, and visualization.

artículo científico publicado en 2017

Combination of Gene Expression Signature and Model for End-stage Liver Disease Score Predicts Survival of Patients With Severe Alcoholic Hepatitis

artículo científico publicado en 2017

Comparison and validation of genomic predictors for anticancer drug sensitivity

artículo científico publicado en 2013

Comparison of prognostic gene expression signatures for breast cancer

artículo científico publicado en 2008

Comprehensive identification of long noncoding RNAs in colorectal cancer.

artículo científico publicado en 2018

Credit Card Fraud Detection: A Realistic Modeling and a Novel Learning Strategy.

artículo científico publicado en 2017

D-peaks: a visual tool to display ChIP-seq peaks along the genome

artículo científico publicado en 2012

DNA methylation-based immune response signature improves patient diagnosis in multiple cancers

artículo científico publicado en 2017

Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade

artículo científico publicado en 2007

Distributed Principal Component Analysis for Wireless Sensor Networks

artículo científico publicado en 2008

Effect of 21 different nitrogen sources on global gene expression in the yeast Saccharomyces cerevisiae

artículo científico publicado en 2007

Evidence of galectin-1 involvement in glioma chemoresistance

artículo científico publicado en 2008

Experimental assessment of static and dynamic algorithms for gene regulation inference from time series expression data.

artículo científico publicado en 2013

Galectin 1 proangiogenic and promigratory effects in the Hs683 oligodendroglioma model are partly mediated through the control of BEX2 expression

artículo científico publicado en 2009

Genome-wide gene expression profiling to predict resistance to anthracyclines in breast cancer patients

artículo científico publicado en 2013

How interacting pathways are regulated by miRNAs in breast cancer subtypes

artículo científico publicado en 2016

In-Silico Integration Approach to Identify a Key miRNA Regulating a Gene Network in Aggressive Prostate Cancer.

artículo científico publicado en 2018

Inference and validation of predictive gene networks from biomedical literature and gene expression data

artículo científico publicado en 2014

Information-theoretic inference of large transcriptional regulatory networks.

artículo científico

Integration of multiple networks and pathways identifies cancer driver genes in pan-cancer analysis.

artículo científico publicado en 2018

Integrative Analysis with Monte Carlo Cross-Validation Reveals miRNAs Regulating Pathways Cross-Talk in Aggressive Breast Cancer

artículo científico publicado en 2015

Knocking down galectin 1 in human hs683 glioblastoma cells impairs both angiogenesis and endoplasmic reticulum stress responses

artículo científico publicado en 2008

Long-term in vitro treatment of human glioblastoma cells with temozolomide increases resistance in vivo through up-regulation of GLUT transporter and aldo-keto reductase enzyme AKR1C expression

artículo científico publicado en 2010

Long-term temozolomide treatment induces marked amino metabolism modifications and an increase in TMZ sensitivity in Hs683 oligodendroglioma cells

artículo científico publicado en 2010

Machine learning techniques to identify putative genes involved in nitrogen catabolite repression in the yeast Saccharomyces cerevisiae

artículo científico publicado en 2008

Multifactorial approach to predicting resistance to anthracyclines

artículo científico publicado en 2011

Multiple-input multiple-output causal strategies for gene selection

artículo científico publicado en 2011

New functionalities in the TCGAbiolinks package for the study and integration of cancer data from GDC and GTEx

artículo científico publicado en 2019

Novel promoters and coding first exons in DLG2 linked to developmental disorders and intellectual disability.

artículo científico

Nucleolus and c-Myc: potential targets of cardenolide-mediated antitumor activity

artículo científico publicado en 2008

Ocean plankton. Determinants of community structure in the global plankton interactome

artículo científico publicado en 2015

On the impact of entropy estimation on transcriptional regulatory network inference based on mutual information.

artículo científico

Portraying breast cancers with long noncoding RNAs.

scientific article published on 02 September 2016

Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen

artículo científico publicado en 2008

Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

artículo científico publicado en 2011

Protect us from poor-quality medical research

artículo científico publicado en 2018

Relevance of different prior knowledge sources for inferring gene interaction networks

artículo científico publicado en 2014

Role of muscarinic receptors in the contraction of jejunal smooth muscle in the horse: An in vitro study

scientific article published on 11 July 2017

STAT1 is a master regulator of pancreatic {beta}-cell apoptosis and islet inflammation

scientific journal article

SpidermiR: An R/Bioconductor Package for Integrative Analysis with miRNA Data

artículo científico publicado en 2017

Study of Meta-analysis strategies for network inference using information-theoretic approaches.

artículo científico publicado en 2017

TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

artículo científico publicado en 2016

TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data

artículo científico publicado en 2015

Temporal profiling of cytokine-induced genes in pancreatic β-cells by meta-analysis and network inference

artículo científico publicado en 2014

UNBS5162, a novel naphthalimide that decreases CXCL chemokine expression in experimental prostate cancers

artículo científico publicado en 2008

Using shRNA experiments to validate gene regulatory networks

artículo científico publicado en 2015

mRMRe: an R package for parallelized mRMR ensemble feature selection

artículo científico publicado en 2013

minet: A R/Bioconductor package for inferring large transcriptional networks using mutual information

artículo científico publicado en 2008

Lista de obras de Gianluca Bontempi

4-IBP, a sigma1 receptor agonist, decreases the migration of human cancer cells, including glioblastoma cells, in vitro and sensitizes them in vitro and in vivo to cytotoxic insults of proapoptotic and proautophagic drugs

A comparative study of survival models for breast cancer prognostication based on microarray data: does a single gene beat them all?

A comprehensive overview of Infinium HumanMethylation450 data processing

A fuzzy gene expression-based computational approach improves breast cancer prognostication

A technological platform for cerebral palsy - the ICT4Rehab project

A three-gene model to robustly identify breast cancer molecular subtypes

Association between the PNPLA3 (rs738409 C>G) variant and hepatocellular carcinoma: Evidence from a meta-analysis of individual participant data

Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes

CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation, and visualization.

Combination of Gene Expression Signature and Model for End-stage Liver Disease Score Predicts Survival of Patients With Severe Alcoholic Hepatitis

Comparison and validation of genomic predictors for anticancer drug sensitivity

Comparison of prognostic gene expression signatures for breast cancer

Comprehensive identification of long noncoding RNAs in colorectal cancer.

Credit Card Fraud Detection: A Realistic Modeling and a Novel Learning Strategy.

D-peaks: a visual tool to display ChIP-seq peaks along the genome

DNA methylation-based immune response signature improves patient diagnosis in multiple cancers

Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade

Distributed Principal Component Analysis for Wireless Sensor Networks

Effect of 21 different nitrogen sources on global gene expression in the yeast Saccharomyces cerevisiae

Evidence of galectin-1 involvement in glioma chemoresistance

Experimental assessment of static and dynamic algorithms for gene regulation inference from time series expression data.

Galectin 1 proangiogenic and promigratory effects in the Hs683 oligodendroglioma model are partly mediated through the control of BEX2 expression

Genome-wide gene expression profiling to predict resistance to anthracyclines in breast cancer patients

How interacting pathways are regulated by miRNAs in breast cancer subtypes

In-Silico Integration Approach to Identify a Key miRNA Regulating a Gene Network in Aggressive Prostate Cancer.

Inference and validation of predictive gene networks from biomedical literature and gene expression data

Information-theoretic inference of large transcriptional regulatory networks.

Integration of multiple networks and pathways identifies cancer driver genes in pan-cancer analysis.

Integrative Analysis with Monte Carlo Cross-Validation Reveals miRNAs Regulating Pathways Cross-Talk in Aggressive Breast Cancer

Knocking down galectin 1 in human hs683 glioblastoma cells impairs both angiogenesis and endoplasmic reticulum stress responses

Long-term in vitro treatment of human glioblastoma cells with temozolomide increases resistance in vivo through up-regulation of GLUT transporter and aldo-keto reductase enzyme AKR1C expression

Long-term temozolomide treatment induces marked amino metabolism modifications and an increase in TMZ sensitivity in Hs683 oligodendroglioma cells

Machine learning techniques to identify putative genes involved in nitrogen catabolite repression in the yeast Saccharomyces cerevisiae

Multifactorial approach to predicting resistance to anthracyclines

Multiple-input multiple-output causal strategies for gene selection

New functionalities in the TCGAbiolinks package for the study and integration of cancer data from GDC and GTEx

Novel promoters and coding first exons in DLG2 linked to developmental disorders and intellectual disability.

Nucleolus and c-Myc: potential targets of cardenolide-mediated antitumor activity

Ocean plankton. Determinants of community structure in the global plankton interactome

On the impact of entropy estimation on transcriptional regulatory network inference based on mutual information.

Portraying breast cancers with long noncoding RNAs.

Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen

Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

Protect us from poor-quality medical research

Relevance of different prior knowledge sources for inferring gene interaction networks

Role of muscarinic receptors in the contraction of jejunal smooth muscle in the horse: An in vitro study

STAT1 is a master regulator of pancreatic {beta}-cell apoptosis and islet inflammation

SpidermiR: An R/Bioconductor Package for Integrative Analysis with miRNA Data

Study of Meta-analysis strategies for network inference using information-theoretic approaches.

TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data

Temporal profiling of cytokine-induced genes in pancreatic β-cells by meta-analysis and network inference

UNBS5162, a novel naphthalimide that decreases CXCL chemokine expression in experimental prostate cancers

Using shRNA experiments to validate gene regulatory networks

mRMRe: an R package for parallelized mRMR ensemble feature selection

minet: A R/Bioconductor package for inferring large transcriptional networks using mutual information