Lista de obras - A. Murat Eren - Dominio Público Uruguay

A Few Pseudomonas Oligotypes Dominate in the Meat and Dairy Processing Environment

artículo científico publicado en 2017

A filtering method to generate high quality short reads using illumina paired-end technology

artículo científico publicado en 2013

A single genus in the gut microbiome reflects host preference and specificity

artículo científico publicado en 2014

Accurate and complete genomes from metagenomes

artículo científico publicado en 2020

Anvi'o: an advanced analysis and visualization platform for 'omics data

artículo científico publicado en 2015

Author Correction: Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes

scientific article published on 01 August 2018

Author Correction: The Wolbachia mobilome in Culex pipiens includes a putative plasmid

artículo científico publicado en 2019

B cell superantigens in the human intestinal microbiota

scientific article published on 01 August 2019

Bacterial communities in penile skin, male urethra, and vaginas of heterosexual couples with and without bacterial vaginosis

artículo científico publicado en 2016

Biochemical diversity of glycosphingolipid biosynthesis as a driver of Coccolithovirus competitive ecology

artículo científico publicado en 2019

Co-occurring genomic capacity for anaerobic methane and dissimilatory sulfur metabolisms discovered in the Korarchaeota

scientific article published on 04 March 2019

Community-led, integrated, reproducible multi-omics with anvi'o

artículo científico publicado en 2021

Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups

artículo científico publicado en 2015

Composite Metagenome-Assembled Genomes Reduce the Quality of Public Genome Repositories.

artículo científico publicado en 2019

DESMAN: a new tool for de novo extraction of strains from metagenomes.

artículo científico publicado en 2017

DRISEE overestimates errors in metagenomic sequencing data.

artículo científico publicado en 2013

Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration

artículo científico publicado en 2024

Discovering new indicators of fecal pollution

artículo científico publicado en 2014

Droplet-based high-throughput cultivation for accurate screening of antibiotic resistant gut microbes

scientific article published on 17 June 2020

Dynamics of tongue microbial communities with single-nucleotide resolution using oligotyping.

artículo científico publicado en 2014

Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities

artículo científico publicado en 2014

Editorial: New Insights into Microbial Ecology through Subtle Nucleotide Variation.

artículo científico publicado en 2016

Exploring the diversity of Gardnerella vaginalis in the genitourinary tract microbiota of monogamous couples through subtle nucleotide variation.

artículo científico publicado en 2011

Extensive Modulation of the Fecal Metagenome in Children With Crohn's Disease During Exclusive Enteral Nutrition

artículo científico publicado en 2015

FORENSIC: an Online Platform for Fecal Source Identification

artículo científico publicado en 2020

Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome

artículo científico publicado en 2020

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

scientific article published in 2022

Genome reconstructions indicate the partitioning of ecological functions inside a phytoplankton bloom in the Amundsen Sea, Antarctica

artículo científico publicado en 2015

Genomic variation in microbial populations inhabiting the marine subseafloor at deep-sea hydrothermal vents

artículo científico publicado en 2017

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

artículo científico publicado en 2019

Gut microbes contribute to variation in solid organ transplant outcomes in mice.

artículo científico publicado en 2018

Guts of the Urban Ecosystem: Microbial Ecology of Sewer Infrastructure

artículo científico publicado en 2022

Histamine-2 receptor blockers alter the fecal microbiota in premature infants.

artículo científico publicado en 2013

Humpback whale populations share a core skin bacterial community: towards a health index for marine mammals?

artículo científico publicado en 2014

Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies

artículo científico publicado en 2016

Linking pangenomes and metagenomes: the Prochlorococcus metapangenome

artículo científico publicado en 2018

Microbial metabolites in the marine carbon cycle

artículo científico publicado en 2022

Microbial signals drive pre-leukaemic myeloproliferation in a Tet2-deficient host.

artículo científico publicado en 2018

Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis

artículo científico publicado en 2018

Minimizing confounders and increasing data quality in murine models for studies of the gut microbiome

scientific article published on 12 July 2018

Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

artículo científico publicado en 2015

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

artículo científico publicado en 2017

Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes

artículo científico publicado en 2018

Oligotyping: Differentiating between closely related microbial taxa using 16S rRNA gene data.

artículo científico publicado en 2013

Patient-Specific Bacteroides Genome Variants in Pouchitis

artículo científico publicado en 2016

Peripartum Antibiotics Promote Gut Dysbiosis, Loss of Immune Tolerance, and Inflammatory Bowel Disease in Genetically Prone Offspring.

artículo científico publicado en 2017

Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics.

artículo científico publicado en 2015

Recurrent patterns of microdiversity in a temperate coastal marine environment.

artículo científico publicado en 2017

SeaBase: a multispecies transcriptomic resource and platform for gene network inference.

artículo científico publicado en 2014

Sewage reflects the distribution of human faecal Lachnospiraceae.

artículo científico publicado en 2013

Sewage reflects the microbiomes of human populations.

artículo científico publicado en 2015

Simulations predict microbial responses in the environment? This environment disagrees retrospectively.

artículo científico publicado en 2017

Single-amino acid variants reveal evolutionary processes that shape the biogeography of a global SAR11 subclade

scientific article published on 03 September 2019

The Diversity and Functional Capacity of Microbes Associated with Coastal Macrophytes

artículo científico publicado en 2022

The Wolbachia mobilome in Culex pipiens includes a putative plasmid

artículo científico publicado en 2019

Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics.

artículo científico publicado en 2017

Transcriptome-wide reprogramming of N6-methyladenosine modification by the mouse microbiome

scientific article published on 17 December 2018

Unifying the known and unknown microbial coding sequence space

scientific article published on 31 March 2022

Vaginal microbiome in early pregnancy and subsequent risk of spontaneous preterm birth: a case-control study

scientific article published on 27 June 2018

Lista de obras de A. Murat Eren

A Few Pseudomonas Oligotypes Dominate in the Meat and Dairy Processing Environment

A filtering method to generate high quality short reads using illumina paired-end technology

A single genus in the gut microbiome reflects host preference and specificity

Accurate and complete genomes from metagenomes

Anvi'o: an advanced analysis and visualization platform for 'omics data

Author Correction: Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes

Author Correction: The Wolbachia mobilome in Culex pipiens includes a putative plasmid

B cell superantigens in the human intestinal microbiota

Bacterial communities in penile skin, male urethra, and vaginas of heterosexual couples with and without bacterial vaginosis

Biochemical diversity of glycosphingolipid biosynthesis as a driver of Coccolithovirus competitive ecology

Co-occurring genomic capacity for anaerobic methane and dissimilatory sulfur metabolisms discovered in the Korarchaeota

Community-led, integrated, reproducible multi-omics with anvi'o

Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups

Composite Metagenome-Assembled Genomes Reduce the Quality of Public Genome Repositories.

DESMAN: a new tool for de novo extraction of strains from metagenomes.

DRISEE overestimates errors in metagenomic sequencing data.

Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration

Discovering new indicators of fecal pollution

Droplet-based high-throughput cultivation for accurate screening of antibiotic resistant gut microbes

Dynamics of tongue microbial communities with single-nucleotide resolution using oligotyping.

Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities

Editorial: New Insights into Microbial Ecology through Subtle Nucleotide Variation.

Exploring the diversity of Gardnerella vaginalis in the genitourinary tract microbiota of monogamous couples through subtle nucleotide variation.

Extensive Modulation of the Fecal Metagenome in Children With Crohn's Disease During Exclusive Enteral Nutrition

FORENSIC: an Online Platform for Fecal Source Identification

Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

Genome reconstructions indicate the partitioning of ecological functions inside a phytoplankton bloom in the Amundsen Sea, Antarctica

Genomic variation in microbial populations inhabiting the marine subseafloor at deep-sea hydrothermal vents

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Gut microbes contribute to variation in solid organ transplant outcomes in mice.

Guts of the Urban Ecosystem: Microbial Ecology of Sewer Infrastructure

Histamine-2 receptor blockers alter the fecal microbiota in premature infants.

Humpback whale populations share a core skin bacterial community: towards a health index for marine mammals?

Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies

Linking pangenomes and metagenomes: the Prochlorococcus metapangenome

Microbial metabolites in the marine carbon cycle

Microbial signals drive pre-leukaemic myeloproliferation in a Tet2-deficient host.

Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis

Minimizing confounders and increasing data quality in murine models for studies of the gut microbiome

Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes

Oligotyping: Differentiating between closely related microbial taxa using 16S rRNA gene data.

Patient-Specific Bacteroides Genome Variants in Pouchitis

Peripartum Antibiotics Promote Gut Dysbiosis, Loss of Immune Tolerance, and Inflammatory Bowel Disease in Genetically Prone Offspring.

Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics.

Recurrent patterns of microdiversity in a temperate coastal marine environment.

SeaBase: a multispecies transcriptomic resource and platform for gene network inference.

Sewage reflects the distribution of human faecal Lachnospiraceae.

Sewage reflects the microbiomes of human populations.

Simulations predict microbial responses in the environment? This environment disagrees retrospectively.

Single-amino acid variants reveal evolutionary processes that shape the biogeography of a global SAR11 subclade

The Diversity and Functional Capacity of Microbes Associated with Coastal Macrophytes

The Wolbachia mobilome in Culex pipiens includes a putative plasmid

Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics.

Transcriptome-wide reprogramming of N6-methyladenosine modification by the mouse microbiome

Unifying the known and unknown microbial coding sequence space

Vaginal microbiome in early pregnancy and subsequent risk of spontaneous preterm birth: a case-control study