Lista de obras -

A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution

artículo científico publicado en 2015

A data-driven integrative model of sepal primordium polarity in Arabidopsis

artículo científico publicado en 2011

A multi-scale model of the interplay between cell signalling and hormone transport in specifying the root meristem of Arabidopsis thaliana

artículo científico publicado en 2016

A protocol to analyse cellular dynamics during plant development.

artículo científico publicado en 2005

A stochastic multicellular model identifies biological watermarks from disorders in self-organized patterns of phyllotaxis.

artículo científico publicado en 2016

Algorithmic height compression of unordered trees

artículo científico publicado en 2015

An auxin transport-based model of root branching in Arabidopsis thaliana

artículo científico publicado en 2008

Auxin fluxes in the root apex co-regulate gravitropism and lateral root initiation.

artículo científico publicado en 2007

BVPy: A FEniCS-based Python package to ease the expression and study of boundary value problems in Biology.

artículo científico publicado en 2021

Benchmarking of deep learning algorithms for 3D instance segmentation of confocal image datasets

artículo científico publicado en 2022

Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis

artículo científico publicado en 2006

Contact area-dependent cell communication and the morphological invariance of ascidian embryogenesis

scientific article published on 01 July 2020

Cortical tension overrides geometrical cues to orient microtubules in confined protoplasts

artículo científico publicado en 2020

DRACO-STEM: An Automatic Tool to Generate High-Quality 3D Meshes of Shoot Apical Meristem Tissue at Cell Resolution

artículo científico publicado en 2017

Definition of architectural ideotypes for good yield capacity in Coffea canephora

artículo científico publicado en 2006

Exploring within-tree architectural development of two apple tree cultivars over 6 years

artículo científico publicado en 2003

Flux-based transport enhancement as a plausible unifying mechanism for auxin transport in meristem development

artículo científico publicado en 2008

Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution.

artículo científico publicado en 2010

Integrating Physiology and Architecture in Models of Fruit Expansion.

artículo científico publicado en 2016

Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots

artículo científico publicado en 2013

Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues

artículo científico publicado en 2013

MAppleT: simulation of apple tree development using mixed stochastic and biomechanical models

article

Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales

artículo científico

Phyllotaxis as geometric canalization during plant development

artículo científico publicado en 2020

Phyllotaxis: from patterns of organogenesis at the meristem to shoot architecture.

artículo científico publicado en 2016

Quantifying the Degree of Self-Nestedness of Trees: Application to the Structural Analysis of Plants ⬇️

artículo científico publicado el 1 de octubre de 2010

Regulation of plant cell wall stiffness by mechanical stress: a mesoscale physical model

article

Similarities and gradients in growth unit branching patterns during ontogeny in "Fuji" apple trees: a stochastic approach

artículo científico publicado en 2006

Simulating Turgor-Induced Stress Patterns in Multilayered Plant Tissues

scientific article published on 11 June 2019

Sugar availability suppresses the auxin-induced strigolactone pathway to promote bud outgrowth

artículo científico publicado en 2019

Systems analysis of auxin transport in the Arabidopsis root apex

artículo científico publicado en 2014

Temporal integration of auxin information for the regulation of patterning

artículo científico publicado en 2020

The auxin signalling network translates dynamic input into robust patterning at the shoot apex

artículo científico publicado en 2011

Understanding patchy landscape dynamics: towards a landscape language

artículo científico publicado en 2012

Lista de obras de

A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution

A data-driven integrative model of sepal primordium polarity in Arabidopsis

A multi-scale model of the interplay between cell signalling and hormone transport in specifying the root meristem of Arabidopsis thaliana

A protocol to analyse cellular dynamics during plant development.

A stochastic multicellular model identifies biological watermarks from disorders in self-organized patterns of phyllotaxis.

Algorithmic height compression of unordered trees

An auxin transport-based model of root branching in Arabidopsis thaliana

Auxin fluxes in the root apex co-regulate gravitropism and lateral root initiation.

BVPy: A FEniCS-based Python package to ease the expression and study of boundary value problems in Biology.

Benchmarking of deep learning algorithms for 3D instance segmentation of confocal image datasets

Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis

Contact area-dependent cell communication and the morphological invariance of ascidian embryogenesis

Cortical tension overrides geometrical cues to orient microtubules in confined protoplasts

DRACO-STEM: An Automatic Tool to Generate High-Quality 3D Meshes of Shoot Apical Meristem Tissue at Cell Resolution

Definition of architectural ideotypes for good yield capacity in Coffea canephora

Exploring within-tree architectural development of two apple tree cultivars over 6 years

Flux-based transport enhancement as a plausible unifying mechanism for auxin transport in meristem development

Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution.

Integrating Physiology and Architecture in Models of Fruit Expansion.

Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots

Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues

MAppleT: simulation of apple tree development using mixed stochastic and biomechanical models

Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales

Phyllotaxis as geometric canalization during plant development

Phyllotaxis: from patterns of organogenesis at the meristem to shoot architecture.

Quantifying the Degree of Self-Nestedness of Trees: Application to the Structural Analysis of Plants ⬇️

Regulation of plant cell wall stiffness by mechanical stress: a mesoscale physical model

Similarities and gradients in growth unit branching patterns during ontogeny in "Fuji" apple trees: a stochastic approach

Simulating Turgor-Induced Stress Patterns in Multilayered Plant Tissues

Sugar availability suppresses the auxin-induced strigolactone pathway to promote bud outgrowth

Systems analysis of auxin transport in the Arabidopsis root apex

Temporal integration of auxin information for the regulation of patterning

The auxin signalling network translates dynamic input into robust patterning at the shoot apex

Understanding patchy landscape dynamics: towards a landscape language