Lista de obras - Simon Creer - Dominio Público Uruguay

100 years of anthropogenic impact causes changes in freshwater functional biodiversity

artículo científico publicado en 2023

A common garden design reveals population-specific variability in potential impacts of hybridization between populations of farmed and wild Atlantic salmon, Salmo salar L.

artículo científico publicado en 2016

A diversity of diversities: Do complex environmental effects underpin associations between below‐ and above‐ground taxa?

artículo científico publicado en 2024

Above-below surface interactions mediate effects of seagrass disturbance on meiobenthic diversity, nematode and polychaete trophic structure

scientific article published on 04 October 2019

Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms

article

Airborne DNA reveals predictable spatial and seasonal dynamics of fungi

artículo científico publicado en 2024

An integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding

artículo científico publicado en 2024

Ancient geological dynamics impact neutral biodiversity accumulation and are detectable in phylogenetic reconstructions

artículo científico publicado en 2021

Animals, protists and bacteria share marine biogeographic patterns

artículo científico publicado en 2021

Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

artículo científico publicado en 2017

Assessing the phylogenetic utility of four mitochondrial genes and a nuclear intron in the asian pit viper genus, Trimeresurus: separate, simultaneous, and conditional data combination analyses

artículo científico publicado en 2003

Can long-range PCR be used to amplify genetically divergent mitochondrial genomes for comparative phylogenetics? A case study within spiders (Arthropoda: Araneae)

artículo científico publicado en 2013

Challenges to Implementing Environmental-DNA Monitoring in Namibia

artículo científico publicado en 2022

Choosing and using introns in molecular phylogenetics.

artículo científico publicado en 2007

Competition and phylogeny determine community structure in Müllerian co-mimics

artículo científico publicado en 2011

Connecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis

artículo científico publicado en 2021

Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers

artículo científico publicado en 2015

Cosmopolitanism of microbial eukaryotes in the global deep seas.

artículo científico publicado en 2012

Cryptic diets of forage fish: jellyfish consumption observed in the Celtic Sea and western English Channel

artículo científico publicado en 2019

DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review

artículo científico publicado en 2021

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

artículo científico publicado en 2019

DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe

artículo científico publicado en 2016

De novo species delimitation in metabarcoding datasets using ecology and phylogeny

scholarly article published 3 August 2017

Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates

scientific article published on 13 April 2019

Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

scientific article published on 09 August 2019

Detection of novel and resident marine species using environmental DNA metabarcoding of sediment and water

Development and application of microsatellites in Carcinus maenas: genetic differentiation between Northern and Central Portuguese populations

artículo científico publicado en 2009

Disentangling the effects of sex, life history and genetic background in Atlantic salmon: growth, heart and liver under common garden conditions

artículo científico publicado en 2020

Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems

scientific article published on 07 March 2019

Diversity and community composition of pico- and nanoplanktonic protists in the Vistula River estuary (Gulf of Gdańsk, Baltic Sea)

artículo científico publicado en 2018

Does density influence relative growth performance of farm, wild and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?

artículo científico publicado en 2016

Domestication-induced reduction in eye size revealed in multiple common garden experiments: The case of Atlantic salmon (<i>Salmo salar</i> L.).

artículo científico publicado en 2021

Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap

artículo científico publicado en 2020

Environmental DNA for wildlife biology and biodiversity monitoring

artículo científico publicado en 2014

Environmental DNA metabarcoding: Transforming how we survey animal and plant communities.

artículo científico publicado en 2017

Environmental DNA monitoring of oncogenic viral shedding and genomic profiling of sea turtle fibropapillomatosis reveals unusual viral dynamics

artículo científico publicado en 2021

Environmental DNA provides higher resolution assessment of riverine biodiversity and ecosystem function via spatio-temporal nestedness and turnover partitioning

scientific article published on 03 May 2021

Environmental DNA size sorting and degradation experiment indicates the state of Daphnia magna mitochondrial and nuclear eDNA is subcellular

artículo científico publicado en 2019

Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems

artículo científico publicado en 2014

Epistatic regulation of growth in Atlantic salmon revealed: a QTL study performed on the domesticated-wild interface

artículo científico publicado en 2020

Erratum: Environmental DNA for wildlife biology and biodiversity monitoring

scholarly article published in Trends in Ecology & Evolution

Evaluation of mesofauna communities as soil quality indicators in a national-level monitoring programme

scholarly article by Paul B.L. George et al published December 2017 in Soil Biology and Biochemistry

Evolutionary drivers of kype size in Atlantic salmon (Salmo salar): domestication, age and genetics

artículo científico publicado en 2019

Executing multi-taxa eDNA ecological assessment via traditional metrics and interactive networks

artículo científico publicado en 2020

Experimental harvesting of fish populations drives genetically based shifts in body size and maturation

artículo científico publicado en 2013

Fauxcurrence: simulating multi‐species occurrences for null models in species distribution modelling and biogeography

artículo científico publicado en 2022

Genetic and ecological correlates of intraspecific variation in pitviper venom composition detected using matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF-MS) and isoelectric focusing

artículo científico publicado en 2003

Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA

artículo científico publicado en 2024

High throughput shotgun sequencing of eRNA reveals taxonomic and derived functional shifts across a benthic productivity gradient

scientific article published on 24 July 2020

How quantitative is metabarcoding: a meta-analytical approach

artículo científico publicado en 2018

Inclusion of nuclear intron sequence data helps to identify the Asian sister group of New World pitvipers

artículo científico publicado en 2009

Introduction: Special issue on species interactions, ecological networks and community dynamics – Untangling the entangled bank using molecular techniques

artículo científico publicado en 2019

Investigating the molecular systematic relationships amongst selectedPlesionika(Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea

artículo científico publicado en 2012

Jellyfish on the menu: mtDNA assay reveals scyphozoan predation in the Irish Sea.

artículo científico publicado en 2017

Key Questions for Next-Generation Biomonitoring

artículo científico publicado en 2020

Long-Term Drought and Warming Alter Soil Bacterial and Fungal Communities in an Upland Heathland

artículo científico publicado en 2021

Managing human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species

artículo científico publicado en 2022

Marine ecology: Genetics from a drop in the ocean

scientific article published on 04 January 2017

Metagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes

article

Molecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors

artículo científico publicado en 2021

Multigene molecular systematics confirm species status of morphologically convergent Pagurus hermit crabs

artículo científico publicado en 2011

Offshore insular variation in the diet of the Taiwanese bamboo viper Trimeresurus stejnegeri (Schmidt).

artículo científico publicado en 2002

Optimal Intron Analyses in the Trimeresurus Radiation of Asian Pitvipers

article

Performance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples

artículo científico publicado en 2018

Phylogenomics and species delimitation for effective conservation of manta and devil rays

artículo científico publicado en 2020

Plant and soil communities are associated with the response of soil water repellency to environmental stress

artículo científico publicado en 2019

Plastic and heritable components of phenotypic variation in Nucella lapillus: an assessment using reciprocal transplant and common garden experiments

artículo científico publicado en 2012

Plastic and heritable variation in shell thickness of the intertidal gastropod Nucella lapillus associated with risks of crab predation and wave action, and sexual maturation

artículo científico publicado en 2012

Plasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet?

artículo científico publicado en 2016

Predicting function from sequence in a large multifunctional toxin family

artículo científico publicado en 2013

Publisher Correction: Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

artículo científico publicado en 2020

Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach

artículo científico publicado en 2017

SNP discovery in European anchovy (Engraulis encrasicolus, L) by high-throughput transcriptome and genome sequencing

artículo científico publicado en 2013

Salinity drives meiofaunal community structure dynamics across the Baltic ecosystem

artículo científico publicado en 2019

Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing

scientific article published in Scientific Reports

Seasonal progression and differences in major floral resource use by bees and hoverflies in a diverse horticultural and agricultural landscape revealed by DNA metabarcoding

artículo científico publicado en 2022

Second-generation environmental sequencing unmasks marine metazoan biodiversity

artículo científico publicado en 2010

Second-generation sequencing derived insights into the temporal biodiversity dynamics of freshwater protists

artículo científico publicado en 2010

Sequencing our way towards understanding global eukaryotic biodiversity

artículo científico publicado en 2012

Shifts in honeybee foraging reveal historical changes in floral resources

scientific article published on 14 January 2021

Strategies for sample labelling and library preparation in DNA metabarcoding studies

artículo científico publicado en 2021

Subtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems.

artículo científico publicado en 2017

Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca).

artículo científico publicado en 2011

Targeting optimal introns for phylogenetic analyses in non-model taxa: experimental results in Asian pitvipers

article

Temperate airborne grass pollen defined by spatio-temporal shifts in community composition

scientific article published on 08 April 2019

Temporal Patterns of Honeybee Foraging in a Diverse Floral Landscape Revealed Using Pollen DNA Metabarcoding of Honey

artículo científico publicado en 2022

Temporal change in floral availability leads to periods of resource limitation and affects diet specificity in a generalist pollinator

artículo científico publicado en 2022

The biogeography of the atlantic salmon (Salmo salar) gut microbiome

artículo científico publicado en 2015

The ecologist's field guide to sequence-based identification of biodiversity

scientific article published in 2016

The importance of being genomic: Non-coding and coding sequences suggest different models of toxin multi-gene family evolution

artículo científico publicado en 2015

Tideless estuaries in brackish seas as possible freshwater-marine transition zones for bacteria: the case study of the Vistula river estuary

artículo científico publicado en 2016

Transcriptomics and in vivo tests reveal novel mechanisms underlying endocrine disruption in an ecological sentinel, Nucella lapillus.

artículo científico publicado en 2012

Using DNA Metabarcoding to Identify Floral Visitation by Pollinators

artículo científico publicado en 2022

Using DNA metabarcoding to investigate honey bee foraging reveals limited flower use despite high floral availability.

artículo científico publicado en 2017

Whole genome duplication and transposable element proliferation drive genome expansion in Corydoradinae catfishes

artículo científico publicado en 2018

Lista de obras de Simon Creer

100 years of anthropogenic impact causes changes in freshwater functional biodiversity

A common garden design reveals population-specific variability in potential impacts of hybridization between populations of farmed and wild Atlantic salmon, Salmo salar L.

A diversity of diversities: Do complex environmental effects underpin associations between below‐ and above‐ground taxa?

Above-below surface interactions mediate effects of seagrass disturbance on meiobenthic diversity, nematode and polychaete trophic structure

Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms

Airborne DNA reveals predictable spatial and seasonal dynamics of fungi

An integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding

Ancient geological dynamics impact neutral biodiversity accumulation and are detectable in phylogenetic reconstructions

Animals, protists and bacteria share marine biogeographic patterns

Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

Assessing the phylogenetic utility of four mitochondrial genes and a nuclear intron in the asian pit viper genus, Trimeresurus: separate, simultaneous, and conditional data combination analyses

Can long-range PCR be used to amplify genetically divergent mitochondrial genomes for comparative phylogenetics? A case study within spiders (Arthropoda: Araneae)

Challenges to Implementing Environmental-DNA Monitoring in Namibia

Choosing and using introns in molecular phylogenetics.

Competition and phylogeny determine community structure in Müllerian co-mimics

Connecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis

Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers

Cosmopolitanism of microbial eukaryotes in the global deep seas.

Cryptic diets of forage fish: jellyfish consumption observed in the Celtic Sea and western English Channel

DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe

De novo species delimitation in metabarcoding datasets using ecology and phylogeny

Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates

Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

Detection of novel and resident marine species using environmental DNA metabarcoding of sediment and water

Development and application of microsatellites in Carcinus maenas: genetic differentiation between Northern and Central Portuguese populations

Disentangling the effects of sex, life history and genetic background in Atlantic salmon: growth, heart and liver under common garden conditions

Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems

Diversity and community composition of pico- and nanoplanktonic protists in the Vistula River estuary (Gulf of Gdańsk, Baltic Sea)

Does density influence relative growth performance of farm, wild and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?

Domestication-induced reduction in eye size revealed in multiple common garden experiments: The case of Atlantic salmon (<i>Salmo salar</i> L.).

Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap

Environmental DNA for wildlife biology and biodiversity monitoring

Environmental DNA metabarcoding: Transforming how we survey animal and plant communities.

Environmental DNA monitoring of oncogenic viral shedding and genomic profiling of sea turtle fibropapillomatosis reveals unusual viral dynamics

Environmental DNA provides higher resolution assessment of riverine biodiversity and ecosystem function via spatio-temporal nestedness and turnover partitioning

Environmental DNA size sorting and degradation experiment indicates the state of Daphnia magna mitochondrial and nuclear eDNA is subcellular

Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems

Epistatic regulation of growth in Atlantic salmon revealed: a QTL study performed on the domesticated-wild interface

Erratum: Environmental DNA for wildlife biology and biodiversity monitoring

Evaluation of mesofauna communities as soil quality indicators in a national-level monitoring programme

Evolutionary drivers of kype size in Atlantic salmon (Salmo salar): domestication, age and genetics

Executing multi-taxa eDNA ecological assessment via traditional metrics and interactive networks

Experimental harvesting of fish populations drives genetically based shifts in body size and maturation

Fauxcurrence: simulating multi‐species occurrences for null models in species distribution modelling and biogeography

Genetic and ecological correlates of intraspecific variation in pitviper venom composition detected using matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF-MS) and isoelectric focusing

Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA

High throughput shotgun sequencing of eRNA reveals taxonomic and derived functional shifts across a benthic productivity gradient

How quantitative is metabarcoding: a meta-analytical approach

Inclusion of nuclear intron sequence data helps to identify the Asian sister group of New World pitvipers

Introduction: Special issue on species interactions, ecological networks and community dynamics – Untangling the entangled bank using molecular techniques

Investigating the molecular systematic relationships amongst selectedPlesionika(Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea

Jellyfish on the menu: mtDNA assay reveals scyphozoan predation in the Irish Sea.

Key Questions for Next-Generation Biomonitoring

Long-Term Drought and Warming Alter Soil Bacterial and Fungal Communities in an Upland Heathland

Managing human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species

Marine ecology: Genetics from a drop in the ocean

Metagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes

Molecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors

Multigene molecular systematics confirm species status of morphologically convergent Pagurus hermit crabs

Offshore insular variation in the diet of the Taiwanese bamboo viper Trimeresurus stejnegeri (Schmidt).

Optimal Intron Analyses in the Trimeresurus Radiation of Asian Pitvipers

Performance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples

Phylogenomics and species delimitation for effective conservation of manta and devil rays

Plant and soil communities are associated with the response of soil water repellency to environmental stress

Plastic and heritable components of phenotypic variation in Nucella lapillus: an assessment using reciprocal transplant and common garden experiments

Plastic and heritable variation in shell thickness of the intertidal gastropod Nucella lapillus associated with risks of crab predation and wave action, and sexual maturation

Plasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet?

Predicting function from sequence in a large multifunctional toxin family

Publisher Correction: Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach

SNP discovery in European anchovy (Engraulis encrasicolus, L) by high-throughput transcriptome and genome sequencing

Salinity drives meiofaunal community structure dynamics across the Baltic ecosystem

Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing

Seasonal progression and differences in major floral resource use by bees and hoverflies in a diverse horticultural and agricultural landscape revealed by DNA metabarcoding

Second-generation environmental sequencing unmasks marine metazoan biodiversity

Second-generation sequencing derived insights into the temporal biodiversity dynamics of freshwater protists

Sequencing our way towards understanding global eukaryotic biodiversity