Lista de obras - David Juan - Dominio Público Uruguay

A global catalog of whole-genome diversity from 233 primate species

Accessible Protein Interaction Data for Network Modeling. Structure of the Information and Available Repositories

artículo científico publicado en 2005

Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome.

artículo científico publicado en 2005

Automatic identification of informative regions with epigenomic changes associated to hematopoiesis

Automatic identification of informative regions with epigenomic changes associated to hematopoiesis.

artículo científico publicado en 2017

Co-evolution and co-adaptation in protein networks

artículo científico publicado en 2008

Comprehensive identification of somatic nucleotide variants in human brain tissue

artículo científico publicado en 2021

Comprehensive identification of somatic nucleotide variants in human brain tissue

Conservation of coevolving protein interfaces bridges prokaryote-eukaryote homologies in the twilight zone

artículo científico publicado en 2016

Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta)

scientific article published on 11 May 2020

Copy number variation underlies complex phenotypes in domestic dog breeds and other canids

artículo científico publicado en 2021

Correction: Telford et al. Expanding the Geographic Characterisation of Epstein-Barr Virus Variation through Gene-Based Approaches. 2020, , 1686

artículo científico publicado en 2021

Current advances in primate genomics: novel approaches for understanding evolution and disease

scientific article published in 2023

Detection of significant protein coevolution

artículo científico publicado en 2015

EcID. A database for the inference of functional interactions in E. coli

artículo científico publicado en 2008

Enhancing the prediction of protein pairings between interacting families using orthology information

artículo científico publicado en 2008

Epigenomic Co-localization and Co-evolution Reveal a Key Role for 5hmC as a Communication Hub in the Chromatin Network of ESCs

artículo científico publicado en 2016

Epigenomic profiling of primate LCLs reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures

Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures

artículo científico publicado en 2021

Expanding the Geographic Characterisation of Epstein-Barr Virus Variation through Gene-Based Approaches

scientific article published on 29 October 2020

Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations

artículo científico publicado en 2020

Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types

artículo científico publicado en 2017

High-confidence prediction of global interactomes based on genome-wide coevolutionary networks

artículo científico publicado en 2008

Identification of amino acid residues crucial for chemokine receptor dimerization.

artículo científico publicado en 2004

Incorporating information on predicted solvent accessibility to the co-evolution-based study of protein interactions

artículo científico publicado en 2012

Inference of functional relations in predicted protein networks with a machine learning approach

artículo científico publicado en 2010

Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity

artículo científico publicado en 2016

Interpreting molecular similarity between patients as a determinant of disease comorbidity relationships

artículo científico publicado en 2020

Intronic CNVs and gene expression variation in human populations

article

Intronic CNVs cause gene expression variation in human population

article

JDet: interactive calculation and visualization of function-related conservation patterns in multiple sequence alignments and structures

artículo científico publicado en 2011

Late-replicating CNVs as a source of new genes

scientific article published on 15 December 2013

Loose ends: almost one in five human genes still have unresolved coding status

artículo científico publicado en 2018

Loose ends: almost one in five human genes still have unresolved coding status

artículo científico publicado en 2018

Multiple evidence strands suggest that there may be as few as 19,000 human protein-coding genes

artículo científico publicado en 2014

Mutation distribution density in tumors reconstructs human’s lost diversity

Prediction of protein interaction based on similarity of phylogenetic trees

artículo científico publicado en 2008

Protein interactions and ligand binding: from protein subfamilies to functional specificity

artículo científico publicado en 2010

Selection of organisms for the co-evolution-based study of protein interactions

artículo científico publicado en 2011

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

scientific article published in Nature Communications

Somatic mutations in Parkinson disease are enriched in synaptic and neuronal processes

Spatiotemporal transcriptomic divergence across human and macaque brain development

artículo científico publicado en 2018

Subfunctionalization via adaptive evolution influenced by genomic context: the case of histone chaperones ASF1a and ASF1b

artículo científico publicado en 2013

TSEMA: interactive prediction of protein pairings between interacting families

artículo científico publicado en 2006

The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease

artículo científico publicado en 2016

The landscape of tolerated genetic variation in humans and primates

Transcriptional dissection of pancreatic tumors engrafted in mice.

artículo científico publicado en 2014

Unveiling the molecular basis of disease co-occurrence: towards personalized comorbidity profiles

Variation in predicted COVID-19 risk among lemurs and lorises

artículo científico

Variation in predicted COVID-19 risk among lemurs and lorises

artículo científico

Lista de obras de David Juan

A global catalog of whole-genome diversity from 233 primate species

Accessible Protein Interaction Data for Network Modeling. Structure of the Information and Available Repositories

Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome.

Automatic identification of informative regions with epigenomic changes associated to hematopoiesis

Automatic identification of informative regions with epigenomic changes associated to hematopoiesis.

Co-evolution and co-adaptation in protein networks

Comprehensive identification of somatic nucleotide variants in human brain tissue

Comprehensive identification of somatic nucleotide variants in human brain tissue

Conservation of coevolving protein interfaces bridges prokaryote-eukaryote homologies in the twilight zone

Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta)

Copy number variation underlies complex phenotypes in domestic dog breeds and other canids

Correction: Telford et al. Expanding the Geographic Characterisation of Epstein-Barr Virus Variation through Gene-Based Approaches. 2020, , 1686

Current advances in primate genomics: novel approaches for understanding evolution and disease

Detection of significant protein coevolution

EcID. A database for the inference of functional interactions in E. coli

Enhancing the prediction of protein pairings between interacting families using orthology information

Epigenomic Co-localization and Co-evolution Reveal a Key Role for 5hmC as a Communication Hub in the Chromatin Network of ESCs

Epigenomic profiling of primate LCLs reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures

Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures

Expanding the Geographic Characterisation of Epstein-Barr Virus Variation through Gene-Based Approaches

Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations

Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types

High-confidence prediction of global interactomes based on genome-wide coevolutionary networks

Identification of amino acid residues crucial for chemokine receptor dimerization.

Incorporating information on predicted solvent accessibility to the co-evolution-based study of protein interactions

Inference of functional relations in predicted protein networks with a machine learning approach

Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity

Interpreting molecular similarity between patients as a determinant of disease comorbidity relationships

Intronic CNVs and gene expression variation in human populations

Intronic CNVs cause gene expression variation in human population

JDet: interactive calculation and visualization of function-related conservation patterns in multiple sequence alignments and structures

Late-replicating CNVs as a source of new genes

Loose ends: almost one in five human genes still have unresolved coding status

Loose ends: almost one in five human genes still have unresolved coding status

Multiple evidence strands suggest that there may be as few as 19,000 human protein-coding genes

Mutation distribution density in tumors reconstructs human’s lost diversity

Prediction of protein interaction based on similarity of phylogenetic trees

Protein interactions and ligand binding: from protein subfamilies to functional specificity

Selection of organisms for the co-evolution-based study of protein interactions

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

Somatic mutations in Parkinson disease are enriched in synaptic and neuronal processes

Spatiotemporal transcriptomic divergence across human and macaque brain development

Subfunctionalization via adaptive evolution influenced by genomic context: the case of histone chaperones ASF1a and ASF1b

TSEMA: interactive prediction of protein pairings between interacting families

The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease

The landscape of tolerated genetic variation in humans and primates

Transcriptional dissection of pancreatic tumors engrafted in mice.

Unveiling the molecular basis of disease co-occurrence: towards personalized comorbidity profiles

Variation in predicted COVID-19 risk among lemurs and lorises

Variation in predicted COVID-19 risk among lemurs and lorises