Lista de obras - Pierre Peyret - Dominio Público Uruguay

ASaiM: a Galaxy-based framework to analyze microbiota data.

artículo científico publicado en 2018

Annotation of microsporidian genomes using transcriptional signals.

artículo científico publicado en 2012

Bacterial Community Composition of Biological Degreasing Systems and Health Risk Assessment for Workers ⬇️

artículo científico publicado el 23 de junio de 2011

Bacterial community changes during bioremediation of aliphatic hydrocarbon-contaminated soil.

artículo científico publicado en 2010

Capturing prokaryotic dark matter genomes.

artículo científico

Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine

artículo científico publicado en 2014

Comparative genomics of microsporidian genomes reveals a minimal non-coding RNA set and new insights for transcription in minimal eukaryotic genomes.

artículo científico publicado en 2017

Complete genome sequence of Crohn's disease-associated adherent-invasive E. coli strain LF82.

artículo científico publicado en 2010

Corrigendum to "unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette".

artículo científico publicado en 2015

Detecting unknown sequences with DNA microarrays: explorative probe design strategies ⬇️

artículo científico publicado el 5 de septiembre de 2011

Detecting variants with Metabolic Design, a new software tool to design probes for explorative functional DNA microarray development

artículo científico publicado en 2010

Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes

artículo científico publicado en 2016

Draft Genomes of Three Strains Representative of the Bacillus anthracis Diversity Found in France

artículo científico publicado en 2014

Exploiting the architecture and the features of the microsporidian genomes to investigate diversity and impact of these parasites on ecosystems.

artículo científico publicado en 2014

Extreme reduction and compaction of microsporidian genomes

artículo científico publicado en 2011

Gene capture coupled to high-throughput sequencing as a strategy for targeted metagenome exploration

artículo científico publicado en 2013

Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces.

artículo científico publicado en 2013

Genome Sequence of Bacillus subtilis Strain HUK15, Isolated from Hexachlorocyclohexane-Contaminated Soil

artículo científico publicado en 2016

Genome Sequence of Pseudomonas sp. HUK17, Isolated from Hexachlorocyclohexane-Contaminated Soil

artículo científico publicado en 2016

Genome Sequence of Staphylococcus aureus Strain HUK16, Isolated from Hexachlorocyclohexane-Contaminated Soil.

artículo científico publicado en 2016

Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi

artículo científico publicado en 2001

GoArrays: highly dynamic and efficient microarray probe design.

artículo científico publicado en 2004

HiSpOD: probe design for functional DNA microarrays ⬇️

artículo científico publicado el 6 de enero de 2011

Hijacking of host cellular functions by an intracellular parasite, the microsporidian Anncaliia algerae.

artículo científico publicado en 2014

Homology modeling and calculation of the cobalt cluster charges of the Encephazlitozoon cuniculi methionine aminopeptidase, a potential target for drug design.

artículo científico publicado en 2003

Identification of sulfur-cycle prokaryotes in a low-sulfate lake (Lake Pavin) using aprA and 16S rRNA gene markers

artículo científico publicado en 2010

Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation

artículo científico publicado en 2009

Identification of two new polar tube proteins related to polar tube protein 2 in the microsporidian Antonospora locustae.

artículo científico publicado en 2013

Impact of clay mineral, wood sawdust or root organic matter on the bacterial and fungal community structures in two aged PAH-contaminated soils.

artículo científico publicado en 2015

In situ TCE degradation mediated by complex dehalorespiring communities during biostimulation processes.

artículo científico publicado en 2012

In vitro propagation of the microsporidian pathogen Brachiola algerae and studies of its chromosome and ribosomal DNA organization in the context of the complete genome sequencing project

artículo científico publicado en 2007

KASpOD--a web service for highly specific and explorative oligonucleotide design

artículo científico publicado en 2012

Large scale explorative oligonucleotide probe selection for thousands of genetic groups on a computing grid: application to phylogenetic probe design using a curated small subunit ribosomal RNA gene database.

artículo científico publicado en 2014

Metatranscriptomics Reveals the Active Bacterial and Eukaryotic Fibrolytic Communities in the Rumen of Dairy Cow Fed a Mixed Diet

artículo científico publicado en 2017

Microsporidian Encephalitozoon cuniculi, a unicellular eukaryote with an unusual chromosomal dispersion of ribosomal genes and a LSU rRNA reduced to the universal core.

artículo científico publicado en 1998

Microsporidian genomes harbor a diverse array of transposable elements that demonstrate an ancestry of horizontal exchange with metazoans.

artículo científico publicado en 2014

Oral exposure to environmental pollutant benzo[a]pyrene impacts the intestinal epithelium and induces gut microbial shifts in murine model.

artículo científico publicado en 2016

PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.

artículo científico publicado en 2014

Polymorphism of the gene encoding a major polar tube protein PTP1 in two microsporidia of the genus Encephalitozoon

artículo científico publicado en 2000

Probe Design Strategies for Oligonucleotide Microarrays

artículo científico publicado en 2016

Production and consumption of methane in freshwater lake ecosystems ⬇️

artículo científico publicado el 13 de junio de 2011

Revealing large metagenomic regions through long DNA fragment hybridization capture.

artículo científico publicado en 2017

RiboTaxa: combined approaches for rRNA genes taxonomic resolution down to the species level from metagenomics data revealing novelties

artículo científico publicado en 2022

Sequence and analysis of chromosome I of the amitochondriate intracellular parasite Encephalitozoon cuniculi (Microspora)

artículo científico publicado en 2001

Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms.

artículo científico publicado en 2016

Solution hybrid selection capture for the recovery of functional full-length eukaryotic cDNAs from complex environmental samples

artículo científico publicado en 2014

Structure, genomic organization, and expression of the Arabidopsis thaliana aconitase gene. Plant aconitase show significant homology with mammalian iron-responsive element-binding protein.

artículo científico publicado en 1995

Targeted Gene Capture by Hybridization to Illuminate Ecosystem Functioning.

artículo científico publicado en 2016

The Prediction and Validation of Small CDSs Expand the Gene Repertoire of the Smallest Known Eukaryotic Genomes.

artículo científico publicado en 2015

The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level

artículo científico publicado en 2013

The identification of rRNA maturation sites in the microsporidian Encephalitozoon cuniculi argues against the full excision of presumed ITS1 sequence.

artículo científico publicado en 2001

The rDNA unit of Encephalitozoon cuniculi (Microsporidia): complete 23S sequence and copy number

artículo científico publicado en 1997

The sequence capture by hybridization: a new approach for revealing the potential of mono-aromatic hydrocarbons bioattenuation in a deep oligotrophic aquifer.

artículo científico publicado en 2016

Three-stage continuous culture system with a self-generated anaerobia to study the regionalized metabolism of the human gut microbiota.

artículo científico publicado en 2013

Unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette

artículo científico publicado en 2014

Wood ash amendment to biogas reactors as an alternative to landfilling? A preliminary study on changes in process chemistry and biology.

artículo científico publicado en 2013

Lista de obras de Pierre Peyret

ASaiM: a Galaxy-based framework to analyze microbiota data.

Annotation of microsporidian genomes using transcriptional signals.

Bacterial Community Composition of Biological Degreasing Systems and Health Risk Assessment for Workers ⬇️

Bacterial community changes during bioremediation of aliphatic hydrocarbon-contaminated soil.

Capturing prokaryotic dark matter genomes.

Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine

Comparative genomics of microsporidian genomes reveals a minimal non-coding RNA set and new insights for transcription in minimal eukaryotic genomes.

Complete genome sequence of Crohn's disease-associated adherent-invasive E. coli strain LF82.

Corrigendum to "unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette".

Detecting unknown sequences with DNA microarrays: explorative probe design strategies ⬇️

Detecting variants with Metabolic Design, a new software tool to design probes for explorative functional DNA microarray development

Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes

Draft Genomes of Three Strains Representative of the Bacillus anthracis Diversity Found in France

Exploiting the architecture and the features of the microsporidian genomes to investigate diversity and impact of these parasites on ecosystems.

Extreme reduction and compaction of microsporidian genomes

Gene capture coupled to high-throughput sequencing as a strategy for targeted metagenome exploration

Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces.

Genome Sequence of Bacillus subtilis Strain HUK15, Isolated from Hexachlorocyclohexane-Contaminated Soil

Genome Sequence of Pseudomonas sp. HUK17, Isolated from Hexachlorocyclohexane-Contaminated Soil

Genome Sequence of Staphylococcus aureus Strain HUK16, Isolated from Hexachlorocyclohexane-Contaminated Soil.

Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi

GoArrays: highly dynamic and efficient microarray probe design.

HiSpOD: probe design for functional DNA microarrays ⬇️

Hijacking of host cellular functions by an intracellular parasite, the microsporidian Anncaliia algerae.

Homology modeling and calculation of the cobalt cluster charges of the Encephazlitozoon cuniculi methionine aminopeptidase, a potential target for drug design.

Identification of sulfur-cycle prokaryotes in a low-sulfate lake (Lake Pavin) using aprA and 16S rRNA gene markers

Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation

Identification of two new polar tube proteins related to polar tube protein 2 in the microsporidian Antonospora locustae.

Impact of clay mineral, wood sawdust or root organic matter on the bacterial and fungal community structures in two aged PAH-contaminated soils.

In situ TCE degradation mediated by complex dehalorespiring communities during biostimulation processes.

In vitro propagation of the microsporidian pathogen Brachiola algerae and studies of its chromosome and ribosomal DNA organization in the context of the complete genome sequencing project

KASpOD--a web service for highly specific and explorative oligonucleotide design

Large scale explorative oligonucleotide probe selection for thousands of genetic groups on a computing grid: application to phylogenetic probe design using a curated small subunit ribosomal RNA gene database.

Metatranscriptomics Reveals the Active Bacterial and Eukaryotic Fibrolytic Communities in the Rumen of Dairy Cow Fed a Mixed Diet

Microsporidian Encephalitozoon cuniculi, a unicellular eukaryote with an unusual chromosomal dispersion of ribosomal genes and a LSU rRNA reduced to the universal core.

Microsporidian genomes harbor a diverse array of transposable elements that demonstrate an ancestry of horizontal exchange with metazoans.

Oral exposure to environmental pollutant benzo[a]pyrene impacts the intestinal epithelium and induces gut microbial shifts in murine model.

PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.

Polymorphism of the gene encoding a major polar tube protein PTP1 in two microsporidia of the genus Encephalitozoon

Probe Design Strategies for Oligonucleotide Microarrays

Production and consumption of methane in freshwater lake ecosystems ⬇️

Revealing large metagenomic regions through long DNA fragment hybridization capture.

RiboTaxa: combined approaches for rRNA genes taxonomic resolution down to the species level from metagenomics data revealing novelties

Sequence and analysis of chromosome I of the amitochondriate intracellular parasite Encephalitozoon cuniculi (Microspora)

Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms.

Solution hybrid selection capture for the recovery of functional full-length eukaryotic cDNAs from complex environmental samples

Structure, genomic organization, and expression of the Arabidopsis thaliana aconitase gene. Plant aconitase show significant homology with mammalian iron-responsive element-binding protein.

Targeted Gene Capture by Hybridization to Illuminate Ecosystem Functioning.

The Prediction and Validation of Small CDSs Expand the Gene Repertoire of the Smallest Known Eukaryotic Genomes.

The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level

The identification of rRNA maturation sites in the microsporidian Encephalitozoon cuniculi argues against the full excision of presumed ITS1 sequence.

The rDNA unit of Encephalitozoon cuniculi (Microsporidia): complete 23S sequence and copy number

The sequence capture by hybridization: a new approach for revealing the potential of mono-aromatic hydrocarbons bioattenuation in a deep oligotrophic aquifer.

Three-stage continuous culture system with a self-generated anaerobia to study the regionalized metabolism of the human gut microbiota.

Unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette

Wood ash amendment to biogas reactors as an alternative to landfilling? A preliminary study on changes in process chemistry and biology.