Lista de obras - Jingyi Jessica Li - Dominio Público Uruguay

A quantitative proteomic analysis of cellular responses to high glucose media in Chinese hamster ovary cells

artículo científico publicado en 2015

A statistical simulator scDesign for rational scRNA-seq experimental design

scholarly article published 7 October 2018

AIDE: annotation-assisted isoform discovery with high precision

scientific article published on 06 November 2019

An accurate and robust imputation method scImpute for single-cell RNA-seq data

artículo científico publicado en 2018

Biclustering of linear patterns in gene expression data

artículo científico publicado en 2012

Clipper: p-value-free FDR control on high-throughput data from two conditions

artículo científico publicado en 2021

Comparative analysis of regulatory information and circuits across distant species

artículo científico publicado en 2014

Comparative analysis of the transcriptome across distant species

artículo científico publicado en 2014

Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data

artículo científico publicado en 2014

Comprehensive mapping of mammalian transcriptomes identifies conserved genes associated with different cell differentiation states

article

Correspondence of D. melanogaster and C. elegans developmental stages revealed by alternative splicing characteristics of conserved exons

artículo científico publicado en 2017

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila

artículo científico publicado en 2012

DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features

artículo científico publicado en 2020

Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions

artículo científico publicado en 2009

Epigenome overlap measure (EPOM) for comparing tissue/cell types based on chromatin states

artículo científico publicado en 2016

Exaggerated false positives by popular differential expression methods when analyzing human population samples

publication published on 15 March 2022

Gene expression. Statistics requantitates the central dogma

artículo científico publicado en 2015

Genomic Applications of the Neyman–Pearson Classification Paradigm

Hybrid Statistical and Mechanistic Mathematical Model Guides Mobile Health Intervention for Chronic Pain.

artículo científico

Large-scale comparative epigenomics reveals hierarchical regulation of non-CG methylation in Arabidopsis.

artículo científico publicado en 2018

Large-scale mapping of mammalian transcriptomes identifies conserved genes associated with different cell states

artículo científico publicado en 2016

NMFP: a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data

artículo científico publicado en 2016

Neyman-Pearson classification algorithms and NP receiver operating characteristics.

artículo científico publicado en 2018

Quantitating translational control: mRNA abundance-dependent and independent contributions and the mRNA sequences that specify them

artículo científico publicado en 2017

Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation

artículo científico publicado en 2011

Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution

artículo científico publicado en 2018

Statistics or biology: the zero-inflation controversy about scRNA-seq data

publication published on 21 January 2022

System wide analyses have underestimated protein abundances and the importance of transcription in mammals

artículo científico publicado en 2014

TRANSCRIPTOME ANALYSIS USING NEXT-GENERATION SEQUENCING

TROM: A Testing-Based Method for Finding Transcriptomic Similarity of Biological Samples ⬇️

artículo científico

The concurrence of DNA methylation and demethylation is associated with transcription regulation

scientific article published on 06 September 2021

The interplay between translational efficiency, poly(A) tails, microRNAs, and neuronal activation

artículo científico publicado en 2022

Understanding patterns and correlates of daily pain using the Sickle cell disease Mobile Application to Record Symptoms via Technology (SMART).

artículo científico publicado en 2017

Word and Sentence Embedding Tools to Measure Semantic Similarity of Gene Ontology Terms by Their Definitions

article

mbImpute: an accurate and robust imputation method for microbiome data

artículo científico publicado en 2021

scImpute: Accurate And Robust Imputation For Single Cell RNA-Seq Data

scholarly article published 24 May 2017

Lista de obras de Jingyi Jessica Li

A quantitative proteomic analysis of cellular responses to high glucose media in Chinese hamster ovary cells

A statistical simulator scDesign for rational scRNA-seq experimental design

AIDE: annotation-assisted isoform discovery with high precision

An accurate and robust imputation method scImpute for single-cell RNA-seq data

Biclustering of linear patterns in gene expression data

Clipper: p-value-free FDR control on high-throughput data from two conditions

Comparative analysis of regulatory information and circuits across distant species

Comparative analysis of the transcriptome across distant species

Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data

Comprehensive mapping of mammalian transcriptomes identifies conserved genes associated with different cell differentiation states

Correspondence of D. melanogaster and C. elegans developmental stages revealed by alternative splicing characteristics of conserved exons

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila

DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features

Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions

Epigenome overlap measure (EPOM) for comparing tissue/cell types based on chromatin states

Exaggerated false positives by popular differential expression methods when analyzing human population samples

Gene expression. Statistics requantitates the central dogma

Genomic Applications of the Neyman–Pearson Classification Paradigm

Hybrid Statistical and Mechanistic Mathematical Model Guides Mobile Health Intervention for Chronic Pain.

Large-scale comparative epigenomics reveals hierarchical regulation of non-CG methylation in Arabidopsis.

Large-scale mapping of mammalian transcriptomes identifies conserved genes associated with different cell states

NMFP: a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data

Neyman-Pearson classification algorithms and NP receiver operating characteristics.

Quantitating translational control: mRNA abundance-dependent and independent contributions and the mRNA sequences that specify them

Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation

Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution

Statistics or biology: the zero-inflation controversy about scRNA-seq data

System wide analyses have underestimated protein abundances and the importance of transcription in mammals

TRANSCRIPTOME ANALYSIS USING NEXT-GENERATION SEQUENCING

TROM: A Testing-Based Method for Finding Transcriptomic Similarity of Biological Samples ⬇️

The concurrence of DNA methylation and demethylation is associated with transcription regulation

The interplay between translational efficiency, poly(A) tails, microRNAs, and neuronal activation

Understanding patterns and correlates of daily pain using the Sickle cell disease Mobile Application to Record Symptoms via Technology (SMART).

Word and Sentence Embedding Tools to Measure Semantic Similarity of Gene Ontology Terms by Their Definitions

mbImpute: an accurate and robust imputation method for microbiome data

scImpute: Accurate And Robust Imputation For Single Cell RNA-Seq Data