Lista de obras - Samuel Soubeyrand - Dominio Público Uruguay

A Bayesian approach for inferring the dynamics of partially observed endemic infectious diseases from space-time-genetic data

artículo científico publicado en 2014

A Bayesian inference framework to reconstruct transmission trees using epidemiological and genetic data

artículo científico publicado en 2012

A Continuous Time-and-State Epidemic Model Fitted to Ordinal Categorical Data Observed on a Lattice at Discrete Times

article published in 2013

A Nonstationary Cylinder–Based Model Describing Group Dispersal in a Fragmented Habitat

article

A Spatio-Temporal Exposure-Hazard Model for Assessing Biological Risk and Impact.

artículo científico publicado en 2017

A framework to assess the contribution of bioaerosols to the outcome of meteorological contexts favorable for rainfall

scholarly article published 21 August 2016

A statistical-reaction-diffusion approach for analyzing expansion processes

artículo científico publicado en 2011

Accounting for biological variability and sampling scale: a multi-scale approach to building epidemic models

artículo científico

Accounting for roughness of circular processes: using Gaussian random processes to model the anisotropic spread of airborne plant disease

artículo científico publicado en 2007

Aggregation patterns in hierarchy/proximity spaces

scientific article published in 2010

Approximate Bayesian computation with functional statistics

artículo científico publicado en 2013

Assessing the Mismatch Between Incubation and Latent Periods for Vector-Borne Diseases: The Case of Sharka

artículo científico publicado en 2015

Autoinfection in wheat leaf rust epidemics

scientific article published on 07 January 2008

Building anisotropic sampling schemes for the estimation of anisotropic dispersal

article published in 2009

Building integrated plant health surveillance: a proactive research agenda for anticipating and mitigating disease and pest emergence

artículo científico publicado en 2024

COVID-19 mortality dynamics: The future modelled as a (mixture of) past(s)

scientific article published on 11 September 2020

Colony adaptive response to simulated heat waves and consequences at the individual level in honeybees (Apis mellifera)

artículo científico publicado en 2017

Computing Geographical Networks Generated by Air‐Mass Movement

artículo científico publicado en 2023

Effect of a one-month lockdown on the epidemic dynamics of COVID-19 in France

artículo científico publicado en 2020

Emigration of the plant pathogen Pseudomonas syringae from leaf litter contributes to its population dynamics in alpine snowpack

artículo científico publicado en 2011

Estimation of the dispersal distances of an aphid-borne virus in a patchy landscape

Estimation of the dispersal distances of an aphid-borne virus in a patchy landscape.

artículo científico publicado en 2018

Evolution of dispersal in asexual populations: to be independent, clumped or grouped?

Exploiting Genetic Information to Trace Plant Virus Dispersal in Landscapes

artículo científico publicado en 2017

Exploring spatial and multitype assemblages of species abundances

artículo científico publicado en 2009

Flight behavior and pheromone changes associated to Nosema ceranae infection of honey bee workers (Apis mellifera) in field conditions

artículo científico publicado en 2013

Goodness-of-fit test of the mark distribution in a point process with non-stationary marks

article by Tomáš Mrkvička et al published 24 June 2011 in Statistics and Computing

Heuristic optimisation of the management strategy of a plant epidemic using sequential sensitivity analyses

article

Inferring epidemiological links from deep sequencing data: a statistical learning approach for human, animal and plant diseases.

artículo científico publicado en 2019

Inferring pathogen dynamics from temporal count data: the emergence of Xylella fastidiosa in France is probably not recent

artículo científico publicado en 2018

Linking winter conditions to regional disease dynamics in a wild plant-pathogen metapopulation

artículo científico publicado en 2014

Long-distance wind-dispersal of spores in a fungal plant pathogen: estimation of anisotropic dispersal kernels from an extensive field experiment.

artículo científico publicado en 2014

Mapping Rainfall Feedback to Reveal the Potential Sensitivity of Precipitation to Biological Aerosols

Mechanical-statistical modeling in ecology: from outbreak detections to pest dynamics

artículo científico publicado en 2008

Mechanistic-statistical SIR modelling for early estimation of the actual number of cases and mortality rate from COVID-19

artículo científico publicado en 2020

Model-based estimation of the link between the daily survival probability and a time-varying covariate, application to mosquitofish survival data

artículo científico publicado en 2007

Modelling the spread in space and time of an airborne plant disease

article

Monte Carlo testing in spatial statistics, with applications to spatial residuals

On parameter estimation for doubly inhomogeneous cluster point processes

OutbreakTools: a new platform for disease outbreak analysis using the R software

artículo científico publicado en 2014

PESO: a modelling framework to help improve management strategies for epidemics - application to sharka

Parameter estimation for reaction-diffusion models of biological invasions

article

Patchy patterns due to group dispersal

artículo científico publicado en 2010

Rainfall feedback via persistent effects on bioaerosols

Rearranging agricultural landscapes towards habitat quality optimisation: In silico application to pest regulation

artículo científico publicado en 2016

Regression-based ranking of pathogen strains with respect to their contribution to natural epidemics

artículo científico publicado en 2014

Reproductive consequences of Colletotrichum lindemuthianum (Ascomycota) infection on wild bean plants (Phaseolus vulgaris)

article

Residual-based specification of a hidden random field included in a hierarchical spatial model

article

Residual-based specification of the random-effects distribution for cluster data

Sharka epidemiology and worldwide management strategies: learning lessons to optimize disease control in perennial plants

artículo científico

Skew-normality for climatic data and dispersal models for plant epidemiology: When application fields drive spatial statistics

article

Spatial exposure-hazard and landscape models for assessing the impact of GM crops on non-target organisms

artículo científico publicado en 2017

Spatiotemporal Structure of Host‐Pathogen Interactions in a Metapopulation

scholarly article by Samuel Soubeyrand et al published September 2009 in The American Naturalist

Spatiotemporal structure of host-pathogen interactions in a metapopulation

artículo científico publicado en 2009

Testing Differences Between Pathogen Compositions with Small Samples and Sparse Data

artículo científico publicado en 2017

The current COVID-19 wave will likely be mitigated in the second-line European countries

artículo científico publicado en 2020

The impact of within-herd genetic variation upon inferred transmission trees for foot-and-mouth disease virus

artículo científico publicado en 2015

Transmission ofLeptosphaeria maculansfrom a cropping season to the following one

article

Using Early Data to Estimate the Actual Infection Fatality Ratio from COVID-19 in France

artículo científico publicado en 2020

Using genetic data to estimate diffusion rates in heterogeneous landscapes

artículo científico publicado en 2015

Using sensitivity analysis to identify key factors for the propagation of a plant epidemic

artículo científico publicado en 2018

Weak convergence of posteriors conditional on maximum pseudo-likelihood estimates and implications in ABC

article

When Group Dispersal and Allee Effect Shape Metapopulation Dynamics

article

cloncase: Estimation of sex frequency and effective population size by clonemate resampling in partially clonal organisms

artículo científico publicado en 2016

Lista de obras de Samuel Soubeyrand

A Bayesian approach for inferring the dynamics of partially observed endemic infectious diseases from space-time-genetic data

A Bayesian inference framework to reconstruct transmission trees using epidemiological and genetic data

A Continuous Time-and-State Epidemic Model Fitted to Ordinal Categorical Data Observed on a Lattice at Discrete Times

A Nonstationary Cylinder–Based Model Describing Group Dispersal in a Fragmented Habitat

A Spatio-Temporal Exposure-Hazard Model for Assessing Biological Risk and Impact.

A framework to assess the contribution of bioaerosols to the outcome of meteorological contexts favorable for rainfall

A statistical-reaction-diffusion approach for analyzing expansion processes

Accounting for biological variability and sampling scale: a multi-scale approach to building epidemic models

Accounting for roughness of circular processes: using Gaussian random processes to model the anisotropic spread of airborne plant disease

Aggregation patterns in hierarchy/proximity spaces

Approximate Bayesian computation with functional statistics

Assessing the Mismatch Between Incubation and Latent Periods for Vector-Borne Diseases: The Case of Sharka

Autoinfection in wheat leaf rust epidemics

Building anisotropic sampling schemes for the estimation of anisotropic dispersal

Building integrated plant health surveillance: a proactive research agenda for anticipating and mitigating disease and pest emergence

COVID-19 mortality dynamics: The future modelled as a (mixture of) past(s)

Colony adaptive response to simulated heat waves and consequences at the individual level in honeybees (Apis mellifera)

Computing Geographical Networks Generated by Air‐Mass Movement

Effect of a one-month lockdown on the epidemic dynamics of COVID-19 in France

Emigration of the plant pathogen Pseudomonas syringae from leaf litter contributes to its population dynamics in alpine snowpack

Estimation of the dispersal distances of an aphid-borne virus in a patchy landscape

Estimation of the dispersal distances of an aphid-borne virus in a patchy landscape.

Evolution of dispersal in asexual populations: to be independent, clumped or grouped?

Exploiting Genetic Information to Trace Plant Virus Dispersal in Landscapes

Exploring spatial and multitype assemblages of species abundances

Flight behavior and pheromone changes associated to Nosema ceranae infection of honey bee workers (Apis mellifera) in field conditions

Goodness-of-fit test of the mark distribution in a point process with non-stationary marks

Heuristic optimisation of the management strategy of a plant epidemic using sequential sensitivity analyses

Inferring epidemiological links from deep sequencing data: a statistical learning approach for human, animal and plant diseases.

Inferring pathogen dynamics from temporal count data: the emergence of Xylella fastidiosa in France is probably not recent

Linking winter conditions to regional disease dynamics in a wild plant-pathogen metapopulation

Long-distance wind-dispersal of spores in a fungal plant pathogen: estimation of anisotropic dispersal kernels from an extensive field experiment.

Mapping Rainfall Feedback to Reveal the Potential Sensitivity of Precipitation to Biological Aerosols

Mechanical-statistical modeling in ecology: from outbreak detections to pest dynamics

Mechanistic-statistical SIR modelling for early estimation of the actual number of cases and mortality rate from COVID-19

Model-based estimation of the link between the daily survival probability and a time-varying covariate, application to mosquitofish survival data

Modelling the spread in space and time of an airborne plant disease

Monte Carlo testing in spatial statistics, with applications to spatial residuals

On parameter estimation for doubly inhomogeneous cluster point processes

OutbreakTools: a new platform for disease outbreak analysis using the R software

PESO: a modelling framework to help improve management strategies for epidemics - application to sharka

Parameter estimation for reaction-diffusion models of biological invasions

Patchy patterns due to group dispersal

Rainfall feedback via persistent effects on bioaerosols

Rearranging agricultural landscapes towards habitat quality optimisation: In silico application to pest regulation

Regression-based ranking of pathogen strains with respect to their contribution to natural epidemics

Reproductive consequences of Colletotrichum lindemuthianum (Ascomycota) infection on wild bean plants (Phaseolus vulgaris)

Residual-based specification of a hidden random field included in a hierarchical spatial model

Residual-based specification of the random-effects distribution for cluster data

Sharka epidemiology and worldwide management strategies: learning lessons to optimize disease control in perennial plants

Skew-normality for climatic data and dispersal models for plant epidemiology: When application fields drive spatial statistics

Spatial exposure-hazard and landscape models for assessing the impact of GM crops on non-target organisms

Spatiotemporal Structure of Host‐Pathogen Interactions in a Metapopulation

Spatiotemporal structure of host-pathogen interactions in a metapopulation

Testing Differences Between Pathogen Compositions with Small Samples and Sparse Data

The current COVID-19 wave will likely be mitigated in the second-line European countries

The impact of within-herd genetic variation upon inferred transmission trees for foot-and-mouth disease virus

Transmission ofLeptosphaeria maculansfrom a cropping season to the following one

Using Early Data to Estimate the Actual Infection Fatality Ratio from COVID-19 in France

Using genetic data to estimate diffusion rates in heterogeneous landscapes

Using sensitivity analysis to identify key factors for the propagation of a plant epidemic

Weak convergence of posteriors conditional on maximum pseudo-likelihood estimates and implications in ABC

When Group Dispersal and Allee Effect Shape Metapopulation Dynamics

cloncase: Estimation of sex frequency and effective population size by clonemate resampling in partially clonal organisms