Lista de obras - Alexander V Alekseyenko - Dominio Público Uruguay

A Link Between Plasma Microbial Translocation, Microbiome, and Autoantibody Development in First-Degree Relatives of Systemic Lupus Erythematosus Patients

artículo científico publicado en 2019

A Simple Approximation to Bias in Gene-Environment Interaction Estimates When a Case Might Not Be the Case

scientific article published on 09 October 2019

A comprehensive evaluation of multicategory classification methods for microbiomic data

artículo científico publicado en 2013

A deep learning segmentation strategy that minimizes the amount of manually annotated images

artículo científico publicado en 2021

A general framework for association analysis of microbial communities on a taxonomic tree.

artículo científico publicado en 2016

A phylogenetic approach for weighting genetic sequences

artículo científico publicado en 2021

A simple approximation to bias in the genetic effect estimates when multiple disease states share a clinical diagnosis

scientific article published on 19 March 2019

A simple approximation to the bias of gene-environment interactions in case-control studies with silent disease

scientific article published on 08 January 2019

Accurate stochastic simulation via the step anticipation tau-leaping (SAL) algorithm

artículo científico publicado en 2009

Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences

artículo científico publicado en 2014

Antibiotic Perturbation of Gut Microbiota Dysregulates Osteoimmune Cross Talk in Postpubertal Skeletal Development

artículo científico publicado en 2019

Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice

artículo científico publicado en 2016

BioSimulator.jl: Stochastic simulation in Julia

scientific article published on 10 October 2018

Case-control studies of gene-environment interactions. When a case might not be the case

artículo científico publicado en 2018

Cigarette smoking and the oral microbiome in a large study of American adults

artículo científico publicado en 2016

Community differentiation of the cutaneous microbiota in psoriasis

artículo científico publicado en 2013

Comparative genomics of oral isolates of Streptococcus mutans by in silico genome subtraction does not reveal accessory DNA associated with severe early childhood caries.

artículo científico publicado en 2013

Cutaneous microbiome effects of fluticasone propionate cream and adjunctive bleach baths in childhood atopic dermatitis.

artículo científico publicado en 2016

Distinct systemic microbiome and microbial translocation are associated with plasma level of anti-CD4 autoantibody in HIV infection

artículo científico publicado en 2018

Diversity of 5S rRNA genes within individual prokaryotic genomes ⬇️

artículo científico publicado el 2 de agosto de 2012

Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults.

artículo científico publicado en 2018

Effect of antibiotic pre-treatment and pathogen challenge on the intestinal microbiota in mice

artículo científico publicado en 2016

Enrichment of lung microbiome with supraglottic taxa is associated with increased pulmonary inflammation

artículo científico

Evidence for Differentiation of Colon Tissue Microbiota in Patients with and without Postoperative Hirschsprung's Associated Enterocolitis: A Pilot Study

artículo científico publicado en 2021

Evidence for a subpopulation of conserved alternative splicing events under selection pressure for protein reading frame preservation

artículo científico publicado en 2004

Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes

artículo científico publicado en 2007

Immune Responses Vary in Preinvasive Colorectal Lesions by Tumor Location and Histology

artículo científico publicado en 2021

Longitudinal changes during pregnancy in gut microbiota and methylmercury biomarkers, and reversal of microbe-exposure correlations

artículo científico publicado en 2019

Lupus nephritis is linked to disease-activity associated expansions and immunity to a gut commensal

scientific article published on 19 February 2019

MODIMA, a Method for Multivariate Omnibus Distance Mediation Analysis, Allows for Integration of Multivariate Exposure-Mediator-Response Relationships

artículo científico publicado en 2019

Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment

artículo científico publicado en 2015

Microbiomic signatures of psoriasis: feasibility and methodology comparison.

artículo científico publicado en 2013

Multivariate Welch t-test on distances.

artículo científico publicado en 2016

Not all phenotypes are created equal: covariates of success in e-phenotype specification

artículo científico publicado en 2022

OHMI: the ontology of host-microbiome interactions

artículo científico publicado en 2019

Online algorithm for assignment of specimens to pooled or individual testing using risk models provides a practical way to increase testing capacity

scientific article published in 2023

Phylogenetic analysis of glucosyltransferases and implications for the coevolution of mutans streptococci with their mammalian hosts

artículo científico publicado en 2013

Phylogenic inference using alignment-free methods for applications in microbial community surveys using 16s rRNA gene.

artículo científico publicado en 2017

Plasma levels of interleukin-1 receptor antagonist (IL1Ra) predict radiographic progression of symptomatic knee osteoarthritis

artículo científico publicado en 2015

Preinvasive Colorectal Lesions of African Americans Display an Immunosuppressive Signature Compared to Caucasian Americans

artículo científico publicado en 2021

Rigorous Plasma Microbiome Analysis Method Enables Disease Association Discovery in Clinic

artículo científico publicado en 2020

Serum Proteins Associated with Emphysema Progression in Severe Alpha-1 Antitrypsin Deficiency

artículo científico publicado en 2017

Simrank: Rapid and sensitive general-purpose k-mer search tool

artículo científico publicado en 2011

Strategic applications of gene expression: from drug discovery/development to bedside

artículo científico publicado en 2013

Systemic Lupus Erythematosus and dysbiosis in the microbiome: cause or effect or both?

artículo científico publicado en 2019

Systemic translocation of Staphylococcus drives autoantibody production in HIV disease

article

Task Force on Design and Analysis in Oral Health Research: Host-Microbiome Interactions in Dysbiosis.

artículo científico publicado en 2017

The RAG2 C terminus suppresses genomic instability and lymphomagenesis ⬇️

artículo científico publicado el 3 de marzo de 2011

Trends and developments in bioinformatics in 2010: prospects and perspectives.

artículo científico publicado en 2011

Tristetraprolin Is Required for Alveolar Bone Homeostasis.

artículo científico publicado en 2018

Tumor-Infiltrating Lymphocytes and Colorectal Cancer Survival in African American and Caucasian Patients.

artículo científico publicado en 2018

Wagner and Dollo: a stochastic duet by composing two parsimonious solos.

artículo científico publicado en 2008

[Formula: see text]-test: robust distance-based multivariate analysis of variance

article

PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances

artículo científico publicado el 19 de mayo de 2016

Lista de obras de Alexander V Alekseyenko

A Link Between Plasma Microbial Translocation, Microbiome, and Autoantibody Development in First-Degree Relatives of Systemic Lupus Erythematosus Patients

A Simple Approximation to Bias in Gene-Environment Interaction Estimates When a Case Might Not Be the Case

A comprehensive evaluation of multicategory classification methods for microbiomic data

A deep learning segmentation strategy that minimizes the amount of manually annotated images

A general framework for association analysis of microbial communities on a taxonomic tree.

A phylogenetic approach for weighting genetic sequences

A simple approximation to bias in the genetic effect estimates when multiple disease states share a clinical diagnosis

A simple approximation to the bias of gene-environment interactions in case-control studies with silent disease

Accurate stochastic simulation via the step anticipation tau-leaping (SAL) algorithm

Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences

Antibiotic Perturbation of Gut Microbiota Dysregulates Osteoimmune Cross Talk in Postpubertal Skeletal Development

Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice

BioSimulator.jl: Stochastic simulation in Julia

Case-control studies of gene-environment interactions. When a case might not be the case

Cigarette smoking and the oral microbiome in a large study of American adults

Community differentiation of the cutaneous microbiota in psoriasis

Comparative genomics of oral isolates of Streptococcus mutans by in silico genome subtraction does not reveal accessory DNA associated with severe early childhood caries.

Cutaneous microbiome effects of fluticasone propionate cream and adjunctive bleach baths in childhood atopic dermatitis.

Distinct systemic microbiome and microbial translocation are associated with plasma level of anti-CD4 autoantibody in HIV infection

Diversity of 5S rRNA genes within individual prokaryotic genomes ⬇️

Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults.

Effect of antibiotic pre-treatment and pathogen challenge on the intestinal microbiota in mice

Enrichment of lung microbiome with supraglottic taxa is associated with increased pulmonary inflammation

Evidence for Differentiation of Colon Tissue Microbiota in Patients with and without Postoperative Hirschsprung's Associated Enterocolitis: A Pilot Study

Evidence for a subpopulation of conserved alternative splicing events under selection pressure for protein reading frame preservation

Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes

Immune Responses Vary in Preinvasive Colorectal Lesions by Tumor Location and Histology

Longitudinal changes during pregnancy in gut microbiota and methylmercury biomarkers, and reversal of microbe-exposure correlations

Lupus nephritis is linked to disease-activity associated expansions and immunity to a gut commensal

MODIMA, a Method for Multivariate Omnibus Distance Mediation Analysis, Allows for Integration of Multivariate Exposure-Mediator-Response Relationships

Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment

Microbiomic signatures of psoriasis: feasibility and methodology comparison.

Multivariate Welch t-test on distances.

Not all phenotypes are created equal: covariates of success in e-phenotype specification

OHMI: the ontology of host-microbiome interactions

Online algorithm for assignment of specimens to pooled or individual testing using risk models provides a practical way to increase testing capacity

Phylogenetic analysis of glucosyltransferases and implications for the coevolution of mutans streptococci with their mammalian hosts

Phylogenic inference using alignment-free methods for applications in microbial community surveys using 16s rRNA gene.

Plasma levels of interleukin-1 receptor antagonist (IL1Ra) predict radiographic progression of symptomatic knee osteoarthritis

Preinvasive Colorectal Lesions of African Americans Display an Immunosuppressive Signature Compared to Caucasian Americans

Rigorous Plasma Microbiome Analysis Method Enables Disease Association Discovery in Clinic

Serum Proteins Associated with Emphysema Progression in Severe Alpha-1 Antitrypsin Deficiency

Simrank: Rapid and sensitive general-purpose k-mer search tool

Strategic applications of gene expression: from drug discovery/development to bedside

Systemic Lupus Erythematosus and dysbiosis in the microbiome: cause or effect or both?

Systemic translocation of Staphylococcus drives autoantibody production in HIV disease

Task Force on Design and Analysis in Oral Health Research: Host-Microbiome Interactions in Dysbiosis.

The RAG2 C terminus suppresses genomic instability and lymphomagenesis ⬇️

Trends and developments in bioinformatics in 2010: prospects and perspectives.

Tristetraprolin Is Required for Alveolar Bone Homeostasis.

Tumor-Infiltrating Lymphocytes and Colorectal Cancer Survival in African American and Caucasian Patients.

Wagner and Dollo: a stochastic duet by composing two parsimonious solos.

[Formula: see text]-test: robust distance-based multivariate analysis of variance

PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances