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Lista de obras de Jonathan Dushoff

A conceptual guide to measuring species diversity

artículo científico publicado en 2021

A double-edged sword: does highly active antiretroviral therapy contribute to syphilis incidence by impairing immunity to Treponema pallidum?

artículo científico publicado en 2017

A mixability theory for the role of sex in evolution

scholarly article

A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data

artículo científico publicado en 2011

A practical generation-interval-based approach to inferring the strength of epidemics from their speed

artículo científico publicado en 2019

A shift from science to politics : a content analysis of COVID-19 Videos on YouTube (Preprint)

artículo científico publicado en 2021

A simulation model of African Anopheles ecology and population dynamics for the analysis of malaria transmission

artículo científico publicado en 2004

Ability to replicate in the cytoplasm predicts zoonotic transmission of livestock viruses.

artículo científico publicado en 2009

Acceleration of plague outbreaks in the second pandemic

scientific article published on 19 October 2020

Age-dependence of healthcare interventions for SARS-CoV-2 infection in Ontario, Canada

artículo científico publicado en 2020

Age-specific mortality risk from pandemic influenza

artículo científico publicado en 2011

Agricultural antibiotics and human health

artículo científico publicado en 2005

Agricultural intensification, priming for persistence and the emergence of Nipah virus: a lethal bat-borne zoonosis

artículo científico publicado en 2011

Alternative stable states in host–phage dynamics

artículo científico publicado en 2007

An extended catalytic model to assess changes in risk for multiple reinfections with SARS-CoV-2

artículo científico publicado en 2023

Analytic calculation of finite-population reproductive numbers for direct- and vector-transmitted diseases with homogeneous mixing.

artículo científico publicado en 2014

Assessing influenza-related mortality: comment on Zucs et al

artículo científico publicado en 2005

Awareness-driven behavior changes can shift the shape of epidemics away from peaks and toward plateaus, shoulders, and oscillations

artículo científico publicado en 2020

Bounding the levels of transmissibility & immune evasion of the Omicron variant in South Africa

artículo científico publicado en 2021

Bursts of nonsynonymous substitutions in HIV-1 evolution reveal instances of positive selection at conservative protein sites

artículo científico publicado en 2006

Calibration of individual-based models to epidemiological data: A systematic review

scientific article published on 11 May 2020

Carrying capacity and demographic stochasticity: scaling behavior of the stochastic logistic model.

artículo científico publicado en 2000

Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus ⬇️

artículo científico publicado el 14 de mayo de 2003

Codon usage and selection on proteins

artículo científico publicado en 2006

Comment on "Metapopulation persistence with age-dependent disturbance or succession"

artículo científico publicado en 2004

Community assembly and the emergence of ecosystem pattern

artículo científico publicado en 2001

Correction to ‘Speciation over the edge: gene flow among non-human primate species across a formidable biogeographic barrier’.

artículo científico publicado en 2018

Correction: Estimating the global burden of endemic canine rabies

artículo científico publicado en 2015

Couple serostatus patterns in sub-Saharan Africa illuminate the relative roles of transmission rates and sexual network characteristics in HIV epidemiology.

artículo científico publicado en 2018

Designing programs for eliminating canine rabies from islands: Bali, Indonesia as a case study

artículo científico publicado en 2013

Detecting selection using a single genome sequence of M. tuberculosis and P. falciparum

artículo científico publicado en 2004

Directionality in the evolution of influenza A haemagglutinin

artículo científico publicado en 2008

Directionality in the evolution of influenza A haemagglutinin.

artículo científico publicado en 2009

Does Counting Different Life Stages Impact Estimates for Extinction Probabilities for Tsetse (Glossina spp)?

artículo científico publicado en 2021

Dynamical resonance can account for seasonality of influenza epidemics

artículo científico publicado en 2004

Ebola control: effect of asymptomatic infection and acquired immunity

artículo científico publicado en 2014

Ebola virus vaccine trials: the ethical mandate for a therapeutic safety net.

artículo científico publicado en 2014

Eco-Evolutionary Theory and Insect Outbreaks

artículo científico publicado en 2017

Ecology and evolution of the flu

article published in 2002

Effects of mixing in threshold models of social behavior.

artículo científico publicado en 2013

Effects of school closure on incidence of pandemic influenza in Alberta, Canada

artículo científico publicado en 2012

Equivalence of the Erlang Seir Epidemic Model and the Renewal Equation

artículo científico publicado en 2018

Estimating finite-population reproductive numbers in heterogeneous populations

artículo científico publicado en 2016

Estimating initial epidemic growth rates

artículo científico publicado en 2013

Estimating selection pressures from limited comparative data

scientific article published on 05 June 2006

Estimating the global burden of endemic canine rabies

artículo científico publicado en 2015

Evaluating Ebola vaccine trials: insights from simulation

artículo científico publicado en 2015

Evidence that promotion of male circumcision did not lead to sexual risk compensation in prioritized Sub-Saharan countries

artículo científico publicado en 2017

Evolution and persistence of influenza A and other diseases

artículo científico publicado en 2004

Examining the molecular clock hypothesis for the contemporary evolution of the rabies virus

artículo científico publicado en 2023

Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm

artículo científico publicado en 2013

Exploring reservoir dynamics: a case study of rabies in the Serengeti ecosystem

artículo científico publicado en 2008

Extra-couple HIV transmission in sub-Saharan Africa: a mathematical modelling study of survey data

artículo científico publicado en 2013

Finding Attractors on a Folding Energy Landscape

artículo científico publicado en 2011

Fitting mechanistic epidemic models to data: A comparison of simple Markov chain Monte Carlo approaches

article by Michael Li et al published July 2018 in Statistical Methods in Medical Research

Fitting mechanistic epidemic models to data: a comparison of simple Markov chain Monte Carlo approaches

artículo científico publicado en 2017

Fluctuation domains in adaptive evolution

artículo científico publicado en 2009

Forward-looking serial intervals correctly link epidemic growth to reproduction numbers

artículo científico publicado en 2021

From science to politics: COVID-19 information fatigue on YouTube

artículo científico publicado en 2022

Functional biogeography of ocean microbes revealed through non-negative matrix factorization

artículo científico publicado en 2012

Genomic dynamics of transposable elements in the western clawed frog (Silurana tropicalis)

artículo científico publicado en 2013

HIV sexual transmission is predominantly driven by single individuals rather than discordant couples: a model-based approach

artículo científico publicado en 2013

Healthcare Resource Uses and Out-of-Pocket Expenses Associated with Pulmonary TB Treatment in Thailand

article

Hemagglutinin sequence clusters and the antigenic evolution of influenza A virus

artículo científico publicado en 2002

Host heterogeneity and disease endemicity: a moment-based approach

scientific article published on 01 December 1999

Host-pathogen interactions, insect outbreaks, and natural selection for disease resistance.

artículo científico publicado en 2008

How to Make Epidemiological Training Infectious ⬇️

artículo científico publicado el 3 de abril de 2012

Human ectoparasite transmission of the plague during the Second Pandemic is only weakly supported by proposed mathematical models

article published in the Proceedings of the National Academy of Sciences of the United States of America

I can see clearly now: Reinterpreting statistical significance

artículo científico publicado en 2019

Immune boosting bridges leaky and polarized vaccination models

artículo científico publicado en 2023

Increased risk of SARS-CoV-2 reinfection associated with emergence of Omicron in South Africa

artículo científico publicado en 2022

Increased risk of SARS-CoV-2 reinfection associated with emergence of Omicron in South Africa

artículo científico publicado en 2021

Incubation-period estimates of Omicron (BA.1) variant from Taiwan, December 2021–January 2022, and its comparison to other SARS-CoV-2 variants: a statistical modeling, systematic search and meta-analysis

artículo científico publicado en 2023

Inferring generation-interval distributions from contact-tracing data

artículo científico publicado en 2020

Inferring generation-interval distributions from contact-tracing data

artículo científico publicado en 2019

Inferring the causes of the three waves of the 1918 influenza pandemic in England and Wales

artículo científico publicado en 2013

Inferring the differences in incubation-period and generation-interval distributions of the Delta and Omicron variants of SARS-CoV-2

artículo científico publicado en 2023

Inferring the differences in incubation-period and generation-interval distributions of the Delta and Omicron variants of SARS-CoV-2

artículo científico publicado en 2022

Initial human transmission dynamics of the pandemic (H1N1) 2009 virus in North America.

artículo científico publicado en 2009

Intermediate levels of asymptomatic transmission can lead to the highest epidemic fatalities

Intervention Serology and Interaction Substitution: Modeling the Role of 'Shield Immunity' in Reducing COVID-19 Epidemic Spread

scientific article published on 03 April 2020

Intimate partner violence is associated with HIV infection in women in Kenya: a cross-sectional analysis

artículo científico publicado en 2013

Intraspecific Variation and Species Coexistence

artículo científico publicado en 2007

Intraspecific variation and species coexistence

artículo científico publicado en 2007

Intrinsic and realized generation intervals in infectious-disease transmission

artículo científico publicado en 2015

Kaiso is highly expressed in TNBC tissues of women of African ancestry compared to Caucasian women

artículo científico publicado en 2017

Lysis, lysogeny and virus-microbe ratios

artículo científico publicado en 2017

MARINE RESERVE DESIGN AND THE EVOLUTION OF SIZE AT MATURATION IN HARVESTED FISH

scholarly article by Marissa L. Baskett et al published June 2005 in Ecological Applications

Male and female bees show large differences in floral preference

artículo científico publicado en 2019

Male and female bees show large differences in floral preference

artículo científico publicado en 2018

Mangrove filtration of anthropogenic nutrients in the Rio Coco Solo, Panama

artículo científico publicado en 2004

Metapopulations, community assembly, and scale invariance in aspect space.

artículo científico publicado en 2002

Modeling post-death transmission of Ebola: challenges for inference and opportunities for control

artículo científico publicado en 2015

Modeling shield immunity to reduce COVID-19 epidemic spread

scientific article published on 07 May 2020

Modeling the Population-Level Effects of Male Circumcision as an HIV-Preventive Measure: A Gendered Perspective ⬇️

artículo científico publicado el 20 de diciembre de 2011

Modeling the effect of HIV coinfection on clearance and sustained virologic response during treatment for hepatitis C virus

artículo científico publicado en 2015

Modelling of OGTT curve identifies 1 h plasma glucose level as a strong predictor of incident type 2 diabetes: results from two prospective cohorts

artículo científico publicado en 2014

Mortality due to influenza in the United States--an annualized regression approach using multiple-cause mortality data

artículo científico publicado en 2005

Moving Beyond a Peak Mentality: Plateaus, Shoulders, Oscillations and Other 'Anomalous' Behavior-Driven Shapes in COVID-19 Outbreaks

artículo científico publicado en 2020

Multi-stability and multi-instability phenomena in a mathematical model of tumor-immune-virus interactions

artículo científico publicado en 2011

Native bees provide insurance against ongoing honey bee losses

artículo científico publicado en 2007

Natural selection for nucleotide usage at synonymous and nonsynonymous sites in influenza A virus genes

artículo científico publicado en 2008

Network metrics reveal differences in social organization between two fission-fusion species, Grevy's zebra and onager.

artículo científico publicado en 2006

On state-space reduction in multi-strain pathogen models, with an application to antigenic drift in influenza A

artículo científico publicado en 2007

On state-space reduction in multi-strain pathogen models, with an application to antigenic drift in influenza A.

artículo científico publicado en 2007

On the accessibility of adaptive phenotypes of a bacterial metabolic network

artículo científico publicado en 2009

On the use of hemagglutination-inhibition for influenza surveillance: surveillance data are predictive of influenza vaccine effectiveness

artículo científico publicado en 2009

Out-of-Pocket Expenditures, Indirect Costs and Health-Related Quality of Life of Patients with Pulmonary Tuberculosis in Thailand

article

Partner age differences and associated sexual risk behaviours among adolescent girls and young women in a cash transfer programme for schooling in Malawi.

artículo científico publicado en 2018

Patterns of influenza vaccination coverage in the United States from 2009 to 2015.

artículo científico publicado en 2017

Patterns of seasonal and pandemic influenza-associated health care and mortality in Ontario, Canada

scientific article published on 06 September 2019

Patterns of spread of influenza A in Canada

artículo científico publicado en 2013

Persistent colonization and the spread of antibiotic resistance in nosocomial pathogens: resistance is a regional problem

scholarly article

Population-level effects of clinical immunity to malaria

artículo científico publicado en 2013

Potential Role of Social Distancing in Mitigating Spread of Coronavirus Disease, South Korea

scientific article published on 14 August 2020

Potential roles of social distancing in mitigating the spread of coronavirus disease 2019 (COVID-19) in South Korea

artículo científico publicado en 2020

Prevalence of epistasis in the evolution of influenza A surface proteins

artículo científico publicado en 2011

Quantifying ethical tradeoffs for vaccine efficacy trials during severe epidemics

Rabies exposures, post-exposure prophylaxis and deaths in a region of endemic canine rabies

artículo científico publicado en 2008

Re: "The 'case-chaos study' L adjunct or alternative to conventional case-control study methodology".

artículo científico publicado en 2013

Reassessment of HIV-1 acute phase infectivity: accounting for heterogeneity and study design with simulated cohorts

artículo científico publicado en 2015

Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak

artículo científico publicado en 2020

Reconciling early-outbreak preliminary estimates of the basic reproductive number and its uncertainty: a new framework and applications to the novel coronavirus (2019-nCoV) outbreak

artículo científico publicado en 2020

Reconstructing influenza incidence by deconvolution of daily mortality time series

scholarly article

Reevaluating Cumulative HIV-1 Viral Load as a Prognostic Predictor: Predicting Opportunistic Infection Incidence and Mortality in a Ugandan Cohort

artículo científico publicado en 2016

Relatedness of the incidence decay with exponential adjustment (IDEA) model, "Farr's law" and SIR compartmental difference equation models

scientific article published on 09 March 2018

Robust estimation of microbial diversity in theory and in practice.

artículo científico publicado en 2013

Roles of generation-interval distributions in shaping relative epidemic strength, speed, and control of new SARS-CoV-2 variants

artículo científico publicado en 2021

SCALING FROM TREES TO FORESTS: TRACTABLE MACROSCOPIC EQUATIONS FOR FOREST DYNAMICS

artículo científico publicado en 2008

Speciation over the edge: gene flow among non-human primate species across a formidable biogeographic barrier

artículo científico publicado en 2017

Species abundance, not diet breadth, drives the persistence of the most linked pollinators as plant-pollinator networks disassemble

artículo científico publicado en 2014

Speed and strength of an epidemic intervention

artículo científico publicado en 2020

Speed and strength of an epidemic intervention

artículo científico publicado en 2021

Statistical power and validity of Ebola vaccine trials in Sierra Leone: a simulation study of trial design and analysis

artículo científico publicado en 2015

Stochastic simulation of multiscale complex systems with PISKaS: A rule-based approach.

artículo científico publicado en 2017

Stochasticity and the limits to confidence when estimating R0 of Ebola and other emerging infectious diseases

artículo científico publicado en 2016

Surveillance to Establish Elimination of Transmission and Freedom from Dog-mediated Rabies

article

Synchronous cycles of domestic dog rabies in sub-Saharan Africa and the impact of control efforts

artículo científico publicado en 2007

Testing and Isolation Efficacy: Insights from a Simple Epidemic Model

artículo científico publicado en 2022

Testing simple indices of habitat proximity

artículo científico publicado en 2005

The Hayflick Limit May Determine the Effective Clonal Diversity of Naive T Cells

artículo científico publicado en 2016

The combined effects of pathogens and predators on insect outbreaks.

artículo científico publicado en 2004

The effect of sexually transmitted co-infections on HIV viral load amongst individuals on antiretroviral therapy: a systematic review and meta-analysis

artículo científico publicado en 2015

The effects of population heterogeneity on disease invasion ⬇️

artículo científico publicado el 1 de julio de 1995

The genesis and spread of reassortment human influenza A/H3N2 viruses conferring adamantane resistance

artículo científico publicado en 2007

The importance of the generation interval in investigating dynamics and control of new SARS-CoV-2 variants

artículo científico publicado en 2022

The odds of duplicate gene persistence after polyploidization.

artículo científico publicado en 2011

The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic

scientific article published in 2021

The risk of a mosquito-borne infection in a heterogeneous environment

artículo científico publicado en 2004

The risk of incomplete personal protection coverage in vector-borne disease

artículo científico publicado en 2016

The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak

scientific article (preprint)

The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak

artículo científico publicado en 2020

The unmitigated profile of COVID-19 infectiousness

artículo científico publicado en 2022

Traditional Male Circumcision is Associated with Sexual Risk Behaviors in Sub-Saharan Countries Prioritized for Male Circumcision

artículo científico publicado en 2020

Transmission dynamics and prospects for the elimination of canine rabies

artículo científico publicado en 2009

Transmission dynamics are crucial to COVID-19 vaccination policy

artículo científico publicado en 2021

Two approaches to forecast Ebola synthetic epidemics.

artículo científico publicado en 2017

US flu mortality estimates are based on solid science

artículo científico publicado en 2006

Unlocking the forest inventory data: relating individual tree performance to unmeasured environmental factors

artículo científico publicado en 2010

Unsupervised statistical clustering of environmental shotgun sequences.

artículo científico publicado en 2009

Vaccinating to protect a vulnerable subpopulation

artículo científico publicado en 2007

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