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Lista de obras de Pierre Thibault

A Novel Differential Ion Mobility Device Expands the Depth of Proteome Coverage and the Sensitivity of Multiplex Proteomic Measurements

scientific article published on 14 July 2018

A Roadmap Toward the Definition of Actionable Tumor-Specific Antigens ⬇️

artículo científico publicado en 2020

A cell-signaling network temporally resolves specific versus promiscuous phosphorylation

artículo científico publicado en 2015

A comprehensive characterization of membrane vesicles released by autophagic human endothelial cells.

artículo científico publicado en 2013

A host YB-1 ribonucleoprotein complex is hijacked by hepatitis C virus for the control of NS3-dependent particle production

artículo científico publicado en 2013

A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells ⬇️

artículo científico publicado el 22 de noviembre de 2010

Accurate Quantitative Proteomic Analyses Using Metabolic Labeling and High Field Asymmetric Waveform Ion Mobility Spectrometry (FAIMS)

artículo científico publicado en 2019

Activation loop phosphorylation of ERK3/ERK4 by group I p21-activated kinases (PAKs) defines a novel PAK-ERK3/4-MAPK-activated protein kinase 5 signaling pathway

artículo científico publicado en 2011

An enhanced mass spectrometry approach reveals human embryonic stem cell growth factors in culture

artículo científico publicado en 2008

Analysis of bacterial glycolipids by capillary electrophoresis-electrospray mass spectrometry: Haemophilus influenzae and Neisseria meningitidis lipopolysaccharides

artículo científico publicado en 2003

Analysis of the biogenesis of heparan sulfate acetyl-CoA:alpha-glucosaminide N-acetyltransferase provides insights into the mechanism underlying its complete deficiency in mucopolysaccharidosis IIIC

artículo científico publicado en 2010

Application of microfluidic devices to proteomics research: identification of trace-level protein digests and affinity capture of target peptides

artículo científico publicado en 2002

Artifactual sulfation of silver-stained proteins: implications for the assignment of phosphorylation and sulfation sites

artículo científico publicado en 2008

Biochemical properties of glycosylation and characterization of a histidine acid phosphatase (phytase) expressed in Pichia pastoris

artículo científico publicado en 2014

Blood extracellular vesicles from healthy individuals regulate hematopoietic stem cells as humans age

artículo científico publicado en 2020

CD4 is active as a signaling molecule on the human monocytic cell line Thp-1.

artículo científico publicado en 2002

CDC28 phosphorylates Cac1p and regulates the association of chromatin assembly factor I with chromatin.

artículo científico publicado en 2015

CLMSVault: A Software Suite for Protein Cross-Linking Mass-Spectrometry Data Analysis and Visualization.

artículo científico publicado en 2017

Caterpillar- and salivary-specific modification of plant proteins.

artículo científico publicado en 2010

Cell cycle regulation of Greatwall kinase nuclear localization facilitates mitotic progression ⬇️

artículo científico publicado el 15 de julio de 2013

Changes in flagellin glycosylation affect Campylobacter autoagglutination and virulence

artículo científico publicado en 2006

Chaperone-mediated acetylation of histones by Rtt109 identified by quantitative proteomics ⬇️

artículo científico publicado el 2 de octubre de 2012

Characterisation of the intact rainbow trout vitellogenin protein and analysis of its derived tryptic and cyanogen bromide peptides by matrix-assisted laser desorption/ionisation time-of-flight-mass spectrometry and electrospray ionisation quadrupol ⬇️

artículo científico publicado el 1 de enero de 2003

Characterization and de novo sequencing of Atlantic salmon vitellogenin protein by electrospray tandem and matrix-assisted laser desorption/ionization mass spectrometry

artículo científico publicado en 2004

Combined Enrichment/Enzymatic Approach To Study Tightly Clustered Multisite Phosphorylation on Ser-Rich Domains

artículo científico publicado en 2018

Combined enzymatic and data mining approaches for comprehensive phosphoproteome analyses: application to cell signaling events of interferon-gamma-stimulated macrophages

artículo científico publicado en 2007

Comparison of the MHC I Immunopeptidome Repertoire of B-Cell Lymphoblasts Using Two Isolation Methods

artículo científico publicado en 2018

Comprehensive profiling of histone modifications using a label-free approach and its applications in determining structure-function relationships

artículo científico publicado en 2008

Correction to "Caterpillar- and Salivary-Specific Modification of Plant Proteins"

scientific article published on 13 April 2016

Corrigendum to "Introduction to the HUPO 2015 Special Issue" [J. Proteomics (2016) 1-2].

artículo científico publicado en 2017

Cross-talk between SUMOylation and ISGylation in response to interferon

artículo científico publicado en 2020

Cyclin B3 activates the Anaphase-Promoting Complex/Cyclosome in meiosis and mitosis

artículo científico publicado en 2020

Deletion of immunoproteasome subunits imprints on the transcriptome and has a broad impact on peptides presented by major histocompatibility complex I molecules.

artículo científico publicado en 2010

Derivatization of carbohydrates

artículo científico publicado en 2003

Discovery of protein acetylation patterns by deconvolution of peptide isomer mass spectra

artículo científico publicado en 2015

Displacement of N/Q-rich Peptides on TiO2Beads Enhances the Depth and Coverage of Yeast Phosphoproteome Analyses ⬇️

artículo científico publicado el 8 de mayo de 2013

Drosophila S2 cells secrete wingless on exosome-like vesicles but the wingless gradient forms independently of exosomes

artículo científico publicado en 2012

Dynamic Phosphoproteomics Uncovers Signaling Pathways Modulated by Anti-oncogenic Sphingolipid Analogs

scientific article published on 27 November 2018

ERAAP Shapes the Peptidome Associated with Classical and Nonclassical MHC Class I Molecules

artículo científico publicado en 2016

ERK1/2 phosphorylate Raptor to promote Ras-dependent activation of mTOR complex 1 (mTORC1).

artículo científico publicado en 2010

ETO2 coordinates cellular proliferation and differentiation during erythropoiesis

artículo científico publicado en 2006

Efficient sample processing for proteomics applications--are we there yet?

artículo científico publicado en 2014

Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches

scientific journal article

Engineering the pattern of protein glycosylation modulates the thermostability of a GH11 xylanase.

artículo científico publicado en 2013

Enhanced protein detection using a trapping mode on a hybrid quadrupole linear ion trap (Q-Trap).

artículo científico publicado en 2009

Enhanced sensitivity in proteomics experiments using FAIMS coupled with a hybrid linear ion trap/Orbitrap mass spectrometer.

artículo científico publicado en 2009

Essential role of BRG, the ATPase subunit of BAF chromatin remodeling complexes, in leukemia maintenance.

artículo científico

Extended Synaptotagmin 1 Interacts with Herpes Simplex Virus 1 Glycoprotein M and Negatively Modulates Virus-Induced Membrane Fusion

artículo científico publicado en 2017

Extending the Comprehensiveness of Immunopeptidome Analyses Using Isobaric Peptide Labeling

scientific article published on 05 June 2020

Fungal Rtt109 histone acetyltransferase is an unexpected structural homolog of metazoan p300/CBP

artículo científico publicado en 2008

Gas-Phase Enrichment of Multiply Charged Peptide Ions by Differential Ion Mobility Extend the Comprehensiveness of SUMO Proteome Analyses.

artículo científico publicado en 2018

Genetic Landscape of Electron Transport Chain Complex I Dependency in Acute Myeloid Leukemia

Global and Site-Specific Changes in 5-Methylcytosine and 5-Hydroxymethylcytosine after Extended Post-mortem Interval

artículo científico publicado en 2016

Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames

artículo científico publicado en 2016

Glycopeptide specificity of the secretory protein folding sensor UDP-glucose glycoprotein:glucosyltransferase.

artículo científico publicado en 2003

Glycoprotein analysis by capillary zone electrophoresis-electrospray mass spectrometry

scientific article published on 01 January 2003

H3 lysine 4 is acetylated at active gene promoters and is regulated by H3 lysine 4 methylation

artículo científico publicado en 2011

H3.3G34W promotes growth and impedes differentiation of osteoblast-like mesenchymal progenitors in Giant Cell Tumour of Bone

scientific article published on 23 September 2020

High-sensitivity nanoLC-MS/MS analysis of urinary desmosine and isodesmosine

artículo científico publicado en 2009

Histone Deacetylase Inhibitors Globally Enhance H3/H4 Tail Acetylation Without Affecting H3 Lysine 56 Acetylation ⬇️

artículo científico publicado el 12 de enero de 2012

Identification and preliminary characterization of a 75-kDa hemin- and hemoglobin-binding outer membrane protein of Actinobacillus pleuropneumoniae serotype 1 ⬇️

artículo científico publicado el 1 de octubre de 2003

Identification of cross talk between SUMOylation and ubiquitylation using a sequential peptide immunopurification approach

artículo científico publicado en 2017

Identification of differentially expressed proteins in human glioblastoma cell lines and tumors

artículo científico publicado en 2003

Identification of glycan structure and glycosylation sites in cellobiohydrolase II and endoglucanases I and II from Trichoderma reesei

artículo científico publicado en 2002

Identification of unusual bacterial glycosylation by tandem mass spectrometry analyses of intact proteins

artículo científico publicado en 2005

Imipridone Anticancer Compounds Ectopically Activate the ClpP Protease and Represent a New Scaffold for Antibiotic Development

artículo científico publicado en 2020

Immunogenic stress and death of cancer cells: Contribution of antigenicity vs adjuvanticity to immunosurveillance

artículo científico publicado en 2017

Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability

artículo científico publicado en 2022

Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides

artículo científico publicado en 2014

Improvement of Phosphoproteome Analyses Using FAIMS and Decision Tree Fragmentation. Application to the Insulin Signaling Pathway in Drosophila melanogaster S2 Cells ⬇️

artículo científico publicado el 3 de febrero de 2012

Improvement of Quantitative Measurements in Multiplex Proteomics Using High-Field Asymmetric Waveform Spectrometry

artículo científico publicado en 2016

In vitro assay to determine SUMOylation sites on protein substrates

artículo científico publicado en 2016

Insights into the insect salivary gland proteome: diet-associated changes in caterpillar labial salivary proteins.

artículo científico publicado en 2013

Integrated microfluidic device for mass spectrometry-based proteomics and its application to biomarker discovery programs

artículo científico publicado en 2005

Integrated system for rapid proteomics analyses using microfluidic devices coupled to nanoelectrospray mass spectrometry

artículo científico publicado en 2004

Interferon, restriction factors and SUMO pathways

artículo científico publicado en 2020

Interplay between histone H3 lysine 56 deacetylation and chromatin modifiers in response to DNA damage.

artículo científico publicado en 2015

Interplay of Ubiquitin-Like Modifiers Following Arsenic Trioxide Treatment

scientific article published on 08 April 2020

Introduction to the HUPO 2015 Special Issue

artículo científico publicado en 2016

Involvement of Extracellular Vesicles in the Proinflammatory Response to Clozapine: Implications for Clozapine-Induced Agranulocytosis

artículo científico publicado en 2024

Kinetic characterization and identification of the acylation and glycosylation sites of recombinant human gamma-glutamyltranspeptidase

artículo científico publicado en 2007

Large-scale analysis of lysine SUMOylation by SUMO remnant immunoaffinity profiling.

artículo científico publicado en 2014

MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses

scientific article published on 13 March 2020

MHC I-associated peptides preferentially derive from transcripts bearing miRNA response elements

artículo científico publicado en 2012

MHC class I-associated peptides derive from selective regions of the human genome

artículo científico publicado en 2016

MYST protein acetyltransferase activity requires active site lysine autoacetylation

artículo científico publicado en 2012

Machine Learning of Global Phosphoproteomic Profiles Enables Discrimination of Direct versus Indirect Kinase Substrates.

artículo científico publicado en 2017

Modulation of histone H3 lysine 56 acetylation as an antifungal therapeutic strategy

artículo científico publicado en 2010

Modulation of the phagosome proteome by interferon-gamma.

artículo científico publicado en 2007

Molecular characterization of the evolution of phagosomes

artículo científico publicado en 2010

Molecular dissection of the eukaryotic initiation factor 4E (eIF4E) export-competent RNP

artículo científico publicado en 2009

Monoubiquitination of ASXLs controls the deubiquitinase activity of the tumor suppressor BAP1

artículo científico publicado en 2018

Most non-canonical proteins uniquely populate the proteome or immunopeptidome

artículo científico

Mubritinib Targets the Electron Transport Chain Complex I and Reveals the Landscape of OXPHOS Dependency in Acute Myeloid Leukemia

scientific article published on 01 July 2019

Multi-Modal Scanning X-Ray Microscopy

N-Terminal ubiquitination of extracellular signal-regulated kinase 3 and p21 directs their degradation by the proteasome

artículo científico publicado en 2004

NanoLC-MS/MS analyses of urinary desmosine, hydroxylysylpyridinoline and lysylpyridinoline as biomarkers for chronic graft-versus-host disease

artículo científico publicado en 2009

Noncoding regions are the main source of targetable tumor-specific antigens

scientific article published on 01 December 2018

Numerical comparison of X-ray differential phase contrast and attenuation contrast

artículo científico publicado en 2012

Occurrence and detection of phosphopeptide isomers in large-scale phosphoproteomics experiments

artículo científico publicado en 2012

Oligodendrocyte-myelin glycoprotein (OMgp) is an inhibitor of neurite outgrowth

artículo científico publicado en 2002

Oncogenic MAPK signaling stimulates mTORC1 activity by promoting RSK-mediated raptor phosphorylation

artículo científico publicado en 2008

Organ messenger ribonucleic acid and plasma proteome changes in the adjuvant-induced arthritis model: responses to disease induction and therapy with the estrogen receptor-beta selective agonist ERB-041

scientific article published on 03 November 2005

Organelle proteomics: looking at less to see more

artículo científico publicado en 2003

Organelle proteomics: looking at less to see more

artículo científico publicado en 2004

Origin and plasticity of MHC I-associated self peptides

artículo científico publicado en 2011

PTEN deficiency and AMPK activation promote nutrient scavenging and anabolism in prostate cancer cells

artículo científico publicado en 2018

Phagosomes are competent organelles for antigen cross-presentation ⬇️

artículo científico publicado el 25 de septiembre de 2003

Phospho-dependent recruitment of the yeast NuA4 acetyltransferase complex by MRX at DNA breaks regulates RPA dynamics during resection

article published in the Proceedings of the National Academy of Sciences of the United States of America

Phosphoproteome dynamics of Saccharomyces cerevisiae under heat shock and cold stress

artículo científico publicado en 2015

Phosphoproteome dynamics reveal novel ERK1/2 MAP kinase substrates with broad spectrum of functions

artículo científico publicado en 2013

Phosphoproteomic analysis identifies the tumor suppressor PDCD4 as a RSK substrate negatively regulated by 14-3-3.

artículo científico publicado en 2014

Phosphorylation network rewiring by gene duplication

artículo científico publicado en 2011

Phosphorylation of IRF-3 on Ser 339 generates a hyperactive form of IRF-3 through regulation of dimerization and CBP association

artículo científico publicado en 2008

Photolabeling of tissue transglutaminase reveals the binding mode of potent cinnamoyl inhibitors.

artículo científico publicado en 2009

Positive regulation of insulin signaling by neuraminidase 1.

artículo científico publicado en 2013

Posttranslational regulation of self-renewal capacity: insights from proteome and phosphoproteome analyses of stem cell leukemia

artículo científico publicado en 2012

Presence of diabetes autoantigens in extracellular vesicles derived from human islets

artículo científico publicado en 2017

Probing genetic variation and glycoform distribution in lectins of the Erythrina genus by mass spectrometry

artículo científico publicado en 2004

Process outgrowth in oligodendrocytes is mediated by CNP, a novel microtubule assembly myelin protein

artículo científico publicado en 2005

Promyelocytic Leukemia Protein (PML) Requirement for Interferon-induced Global Cellular SUMOylation

scientific article published on 13 March 2018

ProteoConnections: a bioinformatics platform to facilitate proteome and phosphoproteome analyses

artículo científico publicado en 2011

Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer

scientific article published on 11 February 2020

Proteome Analysis and Functional Expression Identify Mortalin as an Antiapoptotic Gene Induced by Elevation of [Na + ] i /[K + ] i Ratio in Cultured Vascular Smooth Muscle Cells

article

Proteome dynamics in health and disease. Foreword

artículo científico publicado en 2015

Proteomic characterization of phagosomal membrane microdomains during phagolysosome biogenesis and evolution

artículo científico publicado en 2012

Proteomic profiling of a mouse model for ovarian granulosa cell tumor identifies VCP as a highly sensitive serum tumor marker in several human cancers

artículo científico publicado en 2012

Proteomic-coupled-network analysis of T877A-androgen receptor interactomes can predict clinical prostate cancer outcomes between White (non-Hispanic) and African-American groups

artículo científico publicado en 2014

Proteomics Analysis of Herpes Simplex Virus Type 1-Infected Cells Reveals Dynamic Changes of Viral Protein Expression, Ubiquitylation, and Phosphorylation ⬇️

artículo científico publicado el 4 de marzo de 2013

Proteomics of Herpes Simplex Virus Type 1 Nuclear Capsids

artículo científico publicado en 2020

Proteomics: from protein structures to clinical applications

artículo científico publicado en 2013

Ptychographic Imaging in Materials and Life Sciences

Ptychography & lensless X-ray imaging

Quantitative SUMO proteomics identifies PIAS1 substrates involved in cell migration and motility

artículo científico publicado en 2020

Quantitative SUMO proteomics reveals the modulation of several PML nuclear body associated proteins and an anti-senescence function of UBC9.

artículo científico publicado en 2018

Quantitative proteomics reveals that only a subset of the endoplasmic reticulum contributes to the phagosome.

artículo científico publicado en 2012

Quantitative proteomics reveals the induction of mitophagy in tumor necrosis factor-α-activated (TNFα) macrophages

artículo científico publicado en 2013

Regulation of stress-inducible phosphoprotein 1 nuclear retention by protein inhibitor of activated STAT PIAS1.

artículo científico publicado en 2013

Regulation of the DNA damage response and gene expression by the Dot1L histone methyltransferase and the 53Bp1 tumour suppressor

artículo científico publicado en 2011

Regulation of the histone deacetylase Hst3 by cyclin-dependent kinases and the ubiquitin ligase SCFCdc4.

artículo científico publicado en 2014

Rejection of leukemic cells requires antigen-specific T cells with high functional avidity.

artículo científico publicado en 2013

Role of SUMOylation in full antiestrogenicity

artículo científico publicado en 2012

SUMO-Modification of the La Protein Facilitates Binding to mRNA In Vitro and in Cells

artículo científico publicado en 2016

Sample Collection Method Bias Effects in Quantitative Phosphoproteomics

artículo científico publicado en 2015

Sample preparation and analytical strategies for large-scale phosphoproteomics experiments

artículo científico

Selective detection and identification of sugar nucleotides by CE-electrospray-MS and its application to bacterial metabolomics

artículo científico publicado en 2004

Simulations of multi-contrast x-ray imaging using near-field speckles

Simulations of x-ray speckle-based dark-field and phase-contrast imaging with a polychromatic beam

Structural heterogeneity of carbohydrate modifications affects serospecificity of Campylobacter flagellins

artículo científico publicado en 2002

Structural maintenance of chromosome (SMC) proteins link microtubule stability to genome integrity

artículo científico publicado en 2014

Structure of Extended Lipopolysaccharide Glycoforms Containing Two Globotriose Units in Haemophilus influenzae Serotype b Strain RM7004 ⬇️

artículo científico publicado el 22 de abril de 2003

Structure of the Rtt109-AcCoA/Vps75 Complex and Implications for Chaperone-Mediated Histone Acetylation ⬇️

artículo científico publicado el 20 de enero de 2011

Structures of carbohydrates found n animals and bacteria

artículo científico publicado en 2003

Subcellular phosphoproteomics

artículo científico publicado en 2010

Synergistic action of co-expressed xylanase/laccase mixtures against milled sugar cane bagasse

article by Raquel Fonseca-Maldonado et al published July 2014 in Process Biochemistry

Targeted Identification of SUMOylation Sites in Human Proteins Using Affinity Enrichment and Paralog-specific Reporter Ions ⬇️

artículo científico publicado el 7 de junio de 2013

The 20S proteasome core, active within apoptotic exosome-like vesicles, induces autoantibody production and accelerates rejection.

artículo científico publicado en 2015

The MHC I immunopeptidome conveys to the cell surface an integrative view of cellular regulation.

artículo científico publicado en 2011

The MHC class I peptide repertoire is molded by the transcriptome.

artículo científico publicado en 2008

The Origin and Immune Recognition of Tumor-Specific Antigens

scientific article published on 12 September 2020

The SysteMHC Atlas project

artículo científico publicado en 2017

The coming of age of phosphoproteomics--from large data sets to inference of protein functions

artículo científico publicado en 2013

The exon junction complex controls the splicing of MAPK and other long intron-containing transcripts in Drosophila

artículo científico publicado en 2010

The imaging and coherence beamline I13L at DIAMOND (Conference Presentation)

artículo científico publicado en 2017

The nature of self for T cells-a systems-level perspective

artículo científico publicado en 2014

The phagosomal proteome in interferon-gamma-activated macrophages

artículo científico publicado en 2009

Time-resolved Phosphoproteome Analysis of Paradoxical RAF Activation Reveals Novel Targets of ERK.

artículo científico publicado en 2017

UBAP2L is a novel BMI1-interacting protein essential for hematopoietic stem cell activity

artículo científico publicado en 2014

UM171 Preserves Epigenetic Marks that Are Reduced in Ex Vivo Culture of Human HSCs via Potentiation of the CLR3-KBTBD4 Complex

artículo científico publicado en 2021

Uncovering the SUMOylation and ubiquitylation crosstalk in human cells using sequential peptide immunopurification

artículo científico publicado en 2017

Undetectable histone O-GlcNAcylation in mammalian cells

artículo científico publicado en 2015

Unraveling Site-Specific and Combinatorial Histone Modifications Using High-Resolution Mass Spectrometry in Histone Deacetylase Mutants of Fission Yeast

artículo científico publicado en 2016

Viscosin, a potent peptidolipid biosurfactant and phytopathogenic mediator produced by a pectolytic strain of Pseudomonas fluorescens

scientific article published on 10 March 2005

WITHDRAWN: Global and site-specific changes in 5-methylcytosine and 5-hydroxymethylcytosine after extended post-mortem interval

artículo científico publicado en 2016

Widespread and tissue-specific expression of endogenous retroelements in human somatic tissues

artículo científico publicado en 2020

X-Ray Near-Field Ptychography for Optically Thick Specimens

aPKC-mediated phosphorylation regulates asymmetric membrane localization of the cell fate determinant Numb

artículo científico publicado en 2007

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