Lista de obras - Marcus J Claesson - Dominio Público Uruguay

16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform

artículo científico publicado en 2016

A clinician's guide to microbiome analysis.

artículo científico publicado en 2017

A comparison of the gut microbiome between long-term users and non-users of proton pump inhibitors.

artículo científico publicado en 2016

Alterations in intestinal microbiota of elderly Irish subjects post-antibiotic therapy

article by Orla O'Sullivan et al published 4 September 2012 in Journal of Antimicrobial Chemotherapy

An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota.

artículo científico publicado en 2011

Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment

publication published on 19 February 2021

BlastXtract2: Improving early exploration of (meta) genomes

artículo científico publicado en 2015

Butyrate Inhibits Osteoclast Activity <i>In Vitro</i> and Regulates Systemic Inflammation and Bone Healing in a Murine Osteotomy Model Compared to Antibiotic-Treated Mice

artículo científico publicado en 2021

Categorization of the gut microbiota: enterotypes or gradients?

artículo científico publicado en 2012

Characterization of endogenous plasmids from Lactobacillus salivarius UCC118.

artículo científico

Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli

artículo científico publicado en 2012

Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease

artículo científico publicado en 2020

Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine

artículo científico publicado en 2009

Comparative and functional analysis of sortase-dependent proteins in the predicted secretome of Lactobacillus salivarius UCC118

artículo científico publicado en 2006

Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei

artículo científico publicado en 2006

Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis.

artículo científico publicado en 2016

Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

artículo científico publicado en 2010

Correction for Walsh et al., Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir.

artículo científico publicado en 2017

Correlation of rRNA gene amplicon pyrosequencing and bacterial culture for microbial compositional analysis of faecal samples from elderly Irish subjects

artículo científico publicado en 2011

Determinants of Reduced Genetic Capacity for Butyrate Synthesis by the Gut Microbiome in Crohn's Disease and Ulcerative Colitis

artículo científico publicado en 2018

Differential Analysis of Longitudinal Methicillin-Resistant Staphylococcus aureus Colonization in Relation to Microbial Shifts in the Nasal Microbiome of Neonatal Piglets

artículo científico publicado en 2021

Differential gene expression in the mesocorticolimbic system of innately high- and low-impulsive rats

scientific article published on 06 February 2019

Disturbance of the gut microbiota in early-life selectively affects visceral pain in adulthood without impacting cognitive or anxiety-related behaviors in male rats.

artículo científico publicado en 2014

Diversity of bifidobacteria within the infant gut microbiota

artículo científico publicado en 2012

Diversity of the genus Lactobacillus revealed by comparative genomics of five species

article

Effect of Lactobacillus salivarius bacteriocin Abp118 on the mouse and pig intestinal microbiota

artículo científico publicado en 2012

Esophageal microbiome in active eosinophilic esophagitis and changes induced by different therapies ⬇️

artículo científico publicado en 2021

Evaluating the latest high-throughput molecular techniques for the exploration of microbial gut communities.

artículo científico publicado en 2010

Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor

artículo científico publicado en 2011

GI genomes

scientific article published on 01 May 2005

Genome-scale analyses of health-promoting bacteria: probiogenomics

artículo científico publicado en 2008

Genomic island identification in Vibrio vulnificus reveals significant genome plasticity in this human pathogen

scientific article published on 27 January 2006

Gut microbiome, big data and machine learning to promote precision medicine for cancer

artículo científico publicado en 2020

Gutted! Unraveling the Role of the Microbiome in Major Depressive Disorder

artículo científico publicado en 2020

Host Microbiota Regulates Central Nervous System Serotonin Receptor 2C Editing in Rodents

artículo científico publicado en 2019

Making Sense of … the Microbiome in Psychiatry

artículo científico publicado en 2019

Metaphor: finding bi-directional best hit homology relationships in (meta)genomic datasets

scientific article published on 27 October 2014

Microbes & neurodevelopment--Absence of microbiota during early life increases activity-related transcriptional pathways in the amygdala.

artículo científico publicado en 2015

Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir

artículo científico publicado en 2016

Microbiome analysis as a platform R&D tool for parasitic nematode disease management

scientific article published on 25 June 2019

Multireplicon genome architecture of Lactobacillus salivarius

artículo científico publicado en 2006

Phylogenomics and comparative genomics of Lactobacillus salivarius, a mammalian gut commensal.

artículo científico publicado en 2017

Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences

artículo científico publicado en 2020

Pro-inflammatory flagellin proteins of prevalent motile commensal bacteria are variably abundant in the intestinal microbiome of elderly humans

artículo científico publicado en 2013

Ranking microbiome variance in inflammatory bowel disease: a large longitudinal intercontinental study

artículo científico publicado en 2020

Regulation of prefrontal cortex myelination by the microbiota.

artículo científico publicado en 2016

SPINGO: a rapid species-classifier for microbial amplicon sequences

artículo científico publicado en 2015

Social interaction-induced activation of RNA splicing in the amygdala of microbiome-deficient mice.

artículo científico publicado en 2018

Species classifier choice is a key consideration when analysing low-complexity food microbiome data

artículo científico publicado en 2018

Strain-Level Metagenomic Analysis of the Fermented Dairy Beverage Nunu Highlights Potential Food Safety Risks

artículo científico publicado en 2017

The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity

artículo científico publicado en 2009

The core faecal bacterial microbiome of Irish Thoroughbred racehorses ⬇️

artículo científico publicado el 19 de agosto de 2013

The genus Lactobacillus--a genomic basis for understanding its diversity

artículo científico publicado en 2007

The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level

artículo científico publicado en 2013

Translating Omics to Food Microbiology.

artículo científico publicado en 2017

Tumour-associated and non-tumour-associated microbiota in colorectal cancer

artículo científico publicado en 2016

Unusual genome complexity in Lactobacillus salivarius JCM1046.

artículo científico publicado en 2014

Lista de obras de Marcus J Claesson

16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform

A clinician's guide to microbiome analysis.

A comparison of the gut microbiome between long-term users and non-users of proton pump inhibitors.

Alterations in intestinal microbiota of elderly Irish subjects post-antibiotic therapy

An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota.

Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment

BlastXtract2: Improving early exploration of (meta) genomes

Butyrate Inhibits Osteoclast Activity <i>In Vitro</i> and Regulates Systemic Inflammation and Bone Healing in a Murine Osteotomy Model Compared to Antibiotic-Treated Mice

Categorization of the gut microbiota: enterotypes or gradients?

Characterization of endogenous plasmids from Lactobacillus salivarius UCC118.

Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli

Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease

Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine

Comparative and functional analysis of sortase-dependent proteins in the predicted secretome of Lactobacillus salivarius UCC118

Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei

Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis.

Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

Correction for Walsh et al., Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir.

Correlation of rRNA gene amplicon pyrosequencing and bacterial culture for microbial compositional analysis of faecal samples from elderly Irish subjects

Determinants of Reduced Genetic Capacity for Butyrate Synthesis by the Gut Microbiome in Crohn's Disease and Ulcerative Colitis

Differential Analysis of Longitudinal Methicillin-Resistant Staphylococcus aureus Colonization in Relation to Microbial Shifts in the Nasal Microbiome of Neonatal Piglets

Differential gene expression in the mesocorticolimbic system of innately high- and low-impulsive rats

Disturbance of the gut microbiota in early-life selectively affects visceral pain in adulthood without impacting cognitive or anxiety-related behaviors in male rats.

Diversity of bifidobacteria within the infant gut microbiota

Diversity of the genus Lactobacillus revealed by comparative genomics of five species

Effect of Lactobacillus salivarius bacteriocin Abp118 on the mouse and pig intestinal microbiota

Esophageal microbiome in active eosinophilic esophagitis and changes induced by different therapies ⬇️

Evaluating the latest high-throughput molecular techniques for the exploration of microbial gut communities.

Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor

GI genomes

Genome-scale analyses of health-promoting bacteria: probiogenomics

Genomic island identification in Vibrio vulnificus reveals significant genome plasticity in this human pathogen

Gut microbiome, big data and machine learning to promote precision medicine for cancer

Gutted! Unraveling the Role of the Microbiome in Major Depressive Disorder

Host Microbiota Regulates Central Nervous System Serotonin Receptor 2C Editing in Rodents

Making Sense of … the Microbiome in Psychiatry

Metaphor: finding bi-directional best hit homology relationships in (meta)genomic datasets

Microbes & neurodevelopment--Absence of microbiota during early life increases activity-related transcriptional pathways in the amygdala.

Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir

Microbiome analysis as a platform R&D tool for parasitic nematode disease management

Multireplicon genome architecture of Lactobacillus salivarius

Phylogenomics and comparative genomics of Lactobacillus salivarius, a mammalian gut commensal.

Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences

Pro-inflammatory flagellin proteins of prevalent motile commensal bacteria are variably abundant in the intestinal microbiome of elderly humans

Ranking microbiome variance in inflammatory bowel disease: a large longitudinal intercontinental study

Regulation of prefrontal cortex myelination by the microbiota.

SPINGO: a rapid species-classifier for microbial amplicon sequences

Social interaction-induced activation of RNA splicing in the amygdala of microbiome-deficient mice.

Species classifier choice is a key consideration when analysing low-complexity food microbiome data

Strain-Level Metagenomic Analysis of the Fermented Dairy Beverage Nunu Highlights Potential Food Safety Risks

The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity

The core faecal bacterial microbiome of Irish Thoroughbred racehorses ⬇️

The genus Lactobacillus--a genomic basis for understanding its diversity

The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level

Translating Omics to Food Microbiology.

Tumour-associated and non-tumour-associated microbiota in colorectal cancer

Unusual genome complexity in Lactobacillus salivarius JCM1046.