Lista de obras - Philipp E. Bayer - Dominio Público Uruguay

A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant-microbe interactions and legume evolution.

scientific article published on 24 August 2016

A reference genome for pea provides insight into legume genome evolution

artículo científico publicado en 2019

Acclimation to different depths by the marine angiosperm Posidonia oceanica: transcriptomic and proteomic profiles

artículo científico publicado en 2013

Adapting legume crops to climate change using genomic approaches.

artículo científico publicado en 2018

An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance

artículo científico publicado en 2017

An efficient approach to BAC based assembly of complex genomes

artículo científico publicado en 2016

Assembly and comparison of two closely related Brassica napus genomes.

artículo científico publicado en 2017

Assembly of the non-heading pak choi genome and comparison with the genomes of heading Chinese cabbage and the oilseed yellow sarson

artículo científico publicado en 2020

Author Correction: Plant pan-genomes are the new reference

artículo científico publicado en 2020

Bias in resistance gene prediction due to repeat masking

article

BioNanoAnalyst: a visualisation tool to assess genome assembly quality using BioNano data.

artículo científico publicado en 2017

Centromere Locations in Brassica A and C Genomes Revealed Through Half-Tetrad Analysis

artículo científico publicado en 2015

Characterization of disease resistance genes in the Brassica napus pangenome reveals significant structural variation

scientific article published on 10 October 2019

Climate Clever Clovers: New Paradigm to Reduce the Environmental Footprint of Ruminants by Breeding Low Methanogenic Forages Utilizing Haplotype Variation

artículo científico publicado en 2017

Climate change and the need for agricultural adaptation

artículo científico publicado en 2020

Construction and comparison of three reference-quality genome assemblies for soybean

scientific article published on 28 October 2019

CropSNPdb: a database of SNP array data for Brassica crops and hexaploid bread wheat

artículo científico publicado en 2019

Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.

artículo científico publicado en 2017

Evaluating Plant Gene Models Using Machine Learning

artículo científico publicado en 2022

Exploring the genetic and adaptive diversity of a pan-Mediterranean crop wild relative: narrow-leafed lupin

artículo científico publicado en 2018

Extensive polyploid clonality was a successful strategy for seagrass to expand into a newly submerged environment

artículo científico publicado en 2022

Frontiers in Dissecting and Managing <i>Brassica</i> Diseases: From Reference-Based RGA Candidate Identification to Building Pan-RGAomes

scientific article published on 25 November 2020

Genetic Diversity Linked to Haplotype Variation in the World Core Collection of Trifolium subterraneum for Boron Toxicity Tolerance Provides Valuable Markers for Pasture Breeding

artículo científico publicado en 2019

Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing

publication published on 08 February 2021

Genome-Wide Association Study of Genetic Control of Seed Fatty Acid Biosynthesis in Brassica napus

scientific article published on January 2016

Genome-Wide Identification and Evolution of Receptor-Like Kinases (RLKs) and Receptor like Proteins (RLPs) in <i>Brassica juncea</i>

scientific article published on 30 December 2020

Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus

article

Genomic comparison of two independent seagrass lineages reveals habitat-driven convergent evolution

artículo científico publicado en 2018

Genotype–Environment mismatch of kelp forests under climate change

artículo científico publicado en 2021

Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003

artículo científico publicado en 2022

High intraspecific diversity of Restorer-of-fertility-like genes in barley

article

High-resolution molecular karyotyping uncovers pairing between ancestrally related Brassica chromosomes

artículo científico publicado en 2014

High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus

artículo científico publicado en 2015

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

artículo científico publicado en 2018

INDEL variation in the regulatory region of the major flowering time gene LanFTc1 is associated with vernalization response and flowering time in narrow-leafed lupin (Lupinus angustifolius L.)

article

Identification and characterization of more than 4 million intervarietal SNPs across the group 7 chromosomes of bread wheat

artículo científico publicado en 2014

Improvements in Genomic Technologies: Application to Crop Genomics

artículo científico publicado en 2017

Large-Scale Structural Variation Detection in Subterranean Clover Subtypes Using Optical Mapping

scientific article published on 17 July 2018

Legume Pangenome Construction Using an Iterative Mapping and Assembly Approach

artículo científico publicado en 2020

Machine learning in agriculture: from silos to marketplaces

artículo científico publicado en 2020

Machine learning models outperform deep learning models, provide interpretation and facilitate feature selection for soybean trait prediction

artículo científico publicado en 2022

Method for Genome-Wide Association Study: A Soybean Example

artículo científico publicado en 2020

Pangenomics Comes of Age: From Bacteria to Plant and Animal Applications

scientific article published on 24 December 2019

Pangenomics and Crop Genome Adaptation in a Changing Climate

scientific article published in 2022

Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

artículo científico publicado en 2014

Plant pan-genomes are the new reference

artículo científico publicado en 2020

Plant pangenomics: approaches, applications and advancements

scientific article published on 23 January 2020

Predicting Cloned Disease Resistance Gene Homologs (CDRHs) in Radish, Underutilised Oilseeds, and Wild Brassicaceae Species ⬇️

artículo científico publicado en 2022

Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

article

QTL Genetic Mapping Study for Traits Affecting Meal Quality in Winter Oilseed Rape (Brassica Napus L.)

artículo científico publicado en 2021

Resources for image-based high-throughput phenotyping in crops and data sharing challenges

artículo científico publicado en 2021

Shifting the limits in wheat research and breeding using a fully annotated reference genome

artículo científico publicado en 2018

Skim-Based Genotyping by Sequencing Using a Double Haploid Population to Call SNPs, Infer Gene Conversions, and Improve Genome Assemblies.

artículo científico publicado en 2016

Skim-based genotyping by sequencing

artículo científico publicado en 2015

The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri).

artículo científico publicado en 2016

The pangenome of an agronomically important crop plant Brassica oleracea

artículo científico publicado en 2016

The pangenome of hexaploid bread wheat

artículo científico publicado en 2017

The western Mediterranean region provided the founder population of domesticated narrow-leafed lupin

artículo científico publicado en 2018

Trait associations in the pangenome of pigeon pea (Cajanus cajan)

artículo científico publicado en 2020

Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome

artículo científico publicado en 2018

Wheat Panache: A pangenome graph database representing presence–absence variation across sixteen bread wheat genomes

artículo científico publicado en 2022

openSNP--a crowdsourced web resource for personal genomics

artículo científico publicado en 2014

runBNG: A software package for BioNano genomic analysis on the command line

artículo científico publicado en 2017

Lista de obras de Philipp E. Bayer

A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant-microbe interactions and legume evolution.

A reference genome for pea provides insight into legume genome evolution

Acclimation to different depths by the marine angiosperm Posidonia oceanica: transcriptomic and proteomic profiles

Adapting legume crops to climate change using genomic approaches.

An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance

An efficient approach to BAC based assembly of complex genomes

Assembly and comparison of two closely related Brassica napus genomes.

Assembly of the non-heading pak choi genome and comparison with the genomes of heading Chinese cabbage and the oilseed yellow sarson

Author Correction: Plant pan-genomes are the new reference

Bias in resistance gene prediction due to repeat masking

BioNanoAnalyst: a visualisation tool to assess genome assembly quality using BioNano data.

Centromere Locations in Brassica A and C Genomes Revealed Through Half-Tetrad Analysis

Characterization of disease resistance genes in the Brassica napus pangenome reveals significant structural variation

Climate Clever Clovers: New Paradigm to Reduce the Environmental Footprint of Ruminants by Breeding Low Methanogenic Forages Utilizing Haplotype Variation

Climate change and the need for agricultural adaptation

Construction and comparison of three reference-quality genome assemblies for soybean

CropSNPdb: a database of SNP array data for Brassica crops and hexaploid bread wheat

Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.

Evaluating Plant Gene Models Using Machine Learning

Exploring the genetic and adaptive diversity of a pan-Mediterranean crop wild relative: narrow-leafed lupin

Extensive polyploid clonality was a successful strategy for seagrass to expand into a newly submerged environment

Frontiers in Dissecting and Managing <i>Brassica</i> Diseases: From Reference-Based RGA Candidate Identification to Building Pan-RGAomes

Genetic Diversity Linked to Haplotype Variation in the World Core Collection of Trifolium subterraneum for Boron Toxicity Tolerance Provides Valuable Markers for Pasture Breeding

Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing

Genome-Wide Association Study of Genetic Control of Seed Fatty Acid Biosynthesis in Brassica napus

Genome-Wide Identification and Evolution of Receptor-Like Kinases (RLKs) and Receptor like Proteins (RLPs) in <i>Brassica juncea</i>

Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus

Genomic comparison of two independent seagrass lineages reveals habitat-driven convergent evolution

Genotype–Environment mismatch of kelp forests under climate change

Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003

High intraspecific diversity of Restorer-of-fertility-like genes in barley

High-resolution molecular karyotyping uncovers pairing between ancestrally related Brassica chromosomes

High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

INDEL variation in the regulatory region of the major flowering time gene LanFTc1 is associated with vernalization response and flowering time in narrow-leafed lupin (Lupinus angustifolius L.)

Identification and characterization of more than 4 million intervarietal SNPs across the group 7 chromosomes of bread wheat

Improvements in Genomic Technologies: Application to Crop Genomics

Large-Scale Structural Variation Detection in Subterranean Clover Subtypes Using Optical Mapping

Legume Pangenome Construction Using an Iterative Mapping and Assembly Approach

Machine learning in agriculture: from silos to marketplaces

Machine learning models outperform deep learning models, provide interpretation and facilitate feature selection for soybean trait prediction

Method for Genome-Wide Association Study: A Soybean Example

Pangenomics Comes of Age: From Bacteria to Plant and Animal Applications

Pangenomics and Crop Genome Adaptation in a Changing Climate

Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

Plant pan-genomes are the new reference

Plant pangenomics: approaches, applications and advancements

Predicting Cloned Disease Resistance Gene Homologs (CDRHs) in Radish, Underutilised Oilseeds, and Wild Brassicaceae Species ⬇️

Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

QTL Genetic Mapping Study for Traits Affecting Meal Quality in Winter Oilseed Rape (Brassica Napus L.)

Resources for image-based high-throughput phenotyping in crops and data sharing challenges

Shifting the limits in wheat research and breeding using a fully annotated reference genome

Skim-Based Genotyping by Sequencing Using a Double Haploid Population to Call SNPs, Infer Gene Conversions, and Improve Genome Assemblies.

Skim-based genotyping by sequencing

The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri).

The pangenome of an agronomically important crop plant Brassica oleracea

The pangenome of hexaploid bread wheat

The western Mediterranean region provided the founder population of domesticated narrow-leafed lupin

Trait associations in the pangenome of pigeon pea (Cajanus cajan)

Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome

Wheat Panache: A pangenome graph database representing presence–absence variation across sixteen bread wheat genomes

openSNP--a crowdsourced web resource for personal genomics

runBNG: A software package for BioNano genomic analysis on the command line