Lista de obras - Johannes Graumann - Dominio Público Uruguay

A PhotoClick cholesterol-based quantitative proteomics screen for cytoplasmic sterol-binding proteins in Saccharomyces cerevisiae

artículo científico publicado en 2020

A SILAC-based approach identifies substrates of caspase-dependent cleavage upon TRAIL-induced apoptosis

artículo científico publicado en 2013

A Systems-level Characterization of the Differentiation of Human Embryonic Stem Cells into Mesenchymal Stem Cells

scientific article published on 22 July 2019

A framework for intelligent data acquisition and real-time database searching for shotgun proteomics

artículo científico publicado en 2011

Activation of the Redox-Regulated Molecular Chaperone Hsp33—A Two-Step Mechanism

artículo científico publicado en 2001

Adaptation of a commonly used, chemically defined medium for human embryonic stem cells to stable isotope labeling with amino acids in cell culture

artículo científico

An Isogenic Human ESC Platform for Functional Evaluation of Genome-wide-Association-Study-Identified Diabetes Genes and Drug Discovery.

artículo científico publicado en 2016

Analysis of polyubiquitin conjugates reveals that the Rpn10 substrate receptor contributes to the turnover of multiple proteasome targets

artículo científico publicado en 2005

Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast

artículo científico publicado en 2004

Author Correction: Genome-wide mapping of plasma protein QTLs identifies putatively causal genes and pathways for cardiovascular disease

artículo científico publicado en 2018

Cardiolipin depletion-induced changes in the Trypanosoma brucei proteome

scientific article published on 19 September 2019

Cell-type-selective pathways and clinical associations of lysophosphatidic acid biosynthesis and signaling in the ovarian cancer microenvironment

article

Characterization of mast cell-derived rRNA-containing microvesicles and their inflammatory impact on endothelial cells

scientific article published on 31 January 2019

Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming

artículo científico publicado en 2010

Complementarity of SOMAscan to LC-MS/MS and RNA-seq for quantitative profiling of human embryonic and mesenchymal stem cells

artículo científico publicado en 2016

Complexity of the eukaryotic dolichol-linked oligosaccharide scramblase suggested by activity correlation profiling mass spectrometry

artículo científico publicado en 2021

Comprehensive transcriptomic and proteomic characterization of human mesenchymal stem cells reveals source specific cellular markers

artículo científico publicado en 2016

Connecting genetic risk to disease end points through the human blood plasma proteome

scientific article published on 27 February 2017

Deciphering the Plasma Proteome of Type 2 Diabetes

scientific article published on 14 September 2020

Deep molecular phenotypes link complex disorders and physiological insult to CpG methylation.

artículo científico publicado en 2018

Depletion of cardiolipin induces major changes in energy metabolism in Trypanosoma brucei bloodstream forms

artículo científico publicado en 2020

Digenic inheritance of mutations in EPHA2 and SLC26A4 in Pendred syndrome

artículo científico publicado en 2020

Dimerization deficiency of enigmatic retinitis pigmentosa-linked rhodopsin mutants

artículo científico publicado en 2016

Dual-platform affinity proteomics identifies links between the recurrence of ovarian carcinoma and proteins released into the tumor microenvironment

artículo científico publicado en 2019

Epigenetic therapy of novel tumour suppressor ZAR1 and its cancer biomarker function

scientific article published on 04 December 2019

Epigenetics meets proteomics in an epigenome-wide association study with circulating blood plasma protein traits

artículo científico publicado en 2020

Fine-Mapping of the Human Blood Plasma N-Glycome onto Its Proteome

scientific article published on 26 June 2019

Genome-wide identification and functional analysis of Apobec-1-mediated C-to-U RNA editing in mouse small intestine and liver

artículo científico publicado en 2014

Genome-wide mapping of plasma protein QTLs identifies putatively causal genes and pathways for cardiovascular disease

artículo científico publicado en 2018

Insulin promoted mobilization of GLUT4 from a perinuclear storage site requires RAB10

artículo científico publicado en 2020

Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging

artículo científico publicado en 2007

Linc-MYH configures INO80 to regulate muscle stem cell numbers and skeletal muscle hypertrophy

scientific article published on 22 September 2020

Loss of the Mia40a oxidoreductase leads to hepato-pancreatic insufficiency in zebrafish

artículo científico publicado en 2018

MARMoSET - Extracting Publication-ready Mass Spectrometry Metadata from RAW Files

artículo científico publicado en 2019

MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.

artículo científico

Mechanical Forces Regulate Cardiomyocyte Myofilament Maturation via the VCL-SSH1-CFL Axis

artículo científico publicado en 2019

Metabolic and proteomic signatures of hypoglycaemia in type 2 diabetes

artículo científico publicado en 2018

MiCEE is a ncRNA-protein complex that mediates epigenetic silencing and nucleolar organization

artículo científico publicado en 2018

MicroRNA regulation of Cbx7 mediates a switch of Polycomb orthologs during ESC differentiation

artículo científico publicado en 2012

MicroRNAs of the miR-290-295 Family Maintain Bivalency in Mouse Embryonic Stem Cells.

artículo científico publicado en 2016

Multi-platform Affinity Proteomics Identify Proteins Linked to Metastasis and Immune Suppression in Ovarian Cancer Plasma

scientific article published on 01 November 2019

Multiubiquitin chain receptors define a layer of substrate selectivity in the ubiquitin-proteasome system

artículo científico publicado en 2004

Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease

artículo científico publicado en 2018

Positioning of nucleosomes containing γ-H2AX precedes active DNA demethylation and transcription initiation

artículo científico publicado en 2021

Proteomic profiling of human cancer pseudopodia for the identification of anti-metastatic drug candidates.

artículo científico publicado en 2018

Proteotranscriptomics Reveal Signaling Networks in the Ovarian Cancer Microenvironment

artículo científico publicado en 2017

Quantitative Proteomic Approaches in Mouse: Stable Isotope Incorporation by Metabolic (SILAC) or Chemical Labeling (Reductive Dimethylation) Combined with High-Resolution Mass Spectrometry

scientific article published on 02 March 2015

Quantitative profiling of ubiquitylated proteins reveals proteasome substrates and the substrate repertoire influenced by the Rpn10 receptor pathway

artículo científico publicado en 2007

Remodeling of ER-plasma membrane contact sites but not STIM1 phosphorylation inhibits Ca2+ influx in mitosis.

artículo científico publicado en 2019

SIRT1 Limits Adipocyte Hyperplasia through c-Myc Inhibition

artículo científico publicado en 2015

SIRT1 promotes lipid metabolism and mitochondrial biogenesis in adipocytes and coordinates adipogenesis by targeting key enzymatic pathways

artículo científico publicado en 2021

Screening for insulin-independent pathways that modulate glucose homeostasis identifies androgen receptor antagonists

Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT)

artículo científico publicado en 2006

Shear stress-induced endothelial adrenomedullin signaling regulates vascular tone and blood pressure

artículo científico publicado en 2019

Small-molecule-mediated chemical knock-down of MuRF1/MuRF2 and attenuation of diaphragm dysfunction in chronic heart failure

scientific article published on 29 May 2019

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins

artículo científico publicado en 2007

Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish

artículo científico publicado en 2020

Susceptibility of microtubule-associated protein 1 light chain 3β (MAP1LC3B/LC3B) knockout mice to lung injury and fibrosis

artículo científico publicado en 2019

Targeting the High-Density Lipoprotein Proteome for the Treatment of Post-Acute Sequelae of SARS-CoV-2

artículo científico publicado en 2024

The 2.2 Å Crystal Structure of Hsp33

The CCT chaperonin is a novel regulator of Ca signaling through modulation of Orai1 trafficking

artículo científico publicado en 2018

The VLDL receptor regulates membrane progesterone receptor trafficking and non-genomic signaling

artículo científico publicado en 2018

The WD40 protein Caf4p is a component of the mitochondrial fission machinery and recruits Dnm1p to mitochondria

artículo científico publicado en 2005

The arc of Mass Spectrometry Exchange Formats is long, but it bends toward HDF5.

artículo científico publicado en 2016

The multicellular signalling network of ovarian cancer metastases

artículo científico publicado en 2021

Tumor-associated macrophages promote ovarian cancer cell migration by secreting transforming growth factor beta induced (TGFBI) and tenascin C

scientific article published on 20 April 2020

UBXD7 binds multiple ubiquitin ligases and implicates p97 in HIF1alpha turnover

artículo científico publicado en 2008

Using hESCs to Probe the Interaction of the Diabetes-Associated Genes CDKAL1 and MT1E.

artículo científico publicado en 2017

flippant-An R package for the automated analysis of fluorescence-based scramblase assays

artículo científico publicado en 2017

microRNA-mediated regulation of mTOR complex components facilitates discrimination between activation and anergy in CD4 T cells.

artículo científico publicado en 2014

multipanelfigure: Simple Assembly of Multiple Plots and Images into a Compound Figure

readat: An R package for reading and working with SomaLogic ADAT files

artículo científico publicado en 2016

Lista de obras de Johannes Graumann

A PhotoClick cholesterol-based quantitative proteomics screen for cytoplasmic sterol-binding proteins in Saccharomyces cerevisiae

A SILAC-based approach identifies substrates of caspase-dependent cleavage upon TRAIL-induced apoptosis

A Systems-level Characterization of the Differentiation of Human Embryonic Stem Cells into Mesenchymal Stem Cells

A framework for intelligent data acquisition and real-time database searching for shotgun proteomics

Activation of the Redox-Regulated Molecular Chaperone Hsp33—A Two-Step Mechanism

Adaptation of a commonly used, chemically defined medium for human embryonic stem cells to stable isotope labeling with amino acids in cell culture

An Isogenic Human ESC Platform for Functional Evaluation of Genome-wide-Association-Study-Identified Diabetes Genes and Drug Discovery.

Analysis of polyubiquitin conjugates reveals that the Rpn10 substrate receptor contributes to the turnover of multiple proteasome targets

Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast

Author Correction: Genome-wide mapping of plasma protein QTLs identifies putatively causal genes and pathways for cardiovascular disease

Cardiolipin depletion-induced changes in the Trypanosoma brucei proteome

Cell-type-selective pathways and clinical associations of lysophosphatidic acid biosynthesis and signaling in the ovarian cancer microenvironment

Characterization of mast cell-derived rRNA-containing microvesicles and their inflammatory impact on endothelial cells

Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming

Complementarity of SOMAscan to LC-MS/MS and RNA-seq for quantitative profiling of human embryonic and mesenchymal stem cells

Complexity of the eukaryotic dolichol-linked oligosaccharide scramblase suggested by activity correlation profiling mass spectrometry

Comprehensive transcriptomic and proteomic characterization of human mesenchymal stem cells reveals source specific cellular markers

Connecting genetic risk to disease end points through the human blood plasma proteome

Deciphering the Plasma Proteome of Type 2 Diabetes

Deep molecular phenotypes link complex disorders and physiological insult to CpG methylation.

Depletion of cardiolipin induces major changes in energy metabolism in Trypanosoma brucei bloodstream forms

Digenic inheritance of mutations in EPHA2 and SLC26A4 in Pendred syndrome

Dimerization deficiency of enigmatic retinitis pigmentosa-linked rhodopsin mutants

Dual-platform affinity proteomics identifies links between the recurrence of ovarian carcinoma and proteins released into the tumor microenvironment

Epigenetic therapy of novel tumour suppressor ZAR1 and its cancer biomarker function

Epigenetics meets proteomics in an epigenome-wide association study with circulating blood plasma protein traits

Fine-Mapping of the Human Blood Plasma N-Glycome onto Its Proteome

Genome-wide identification and functional analysis of Apobec-1-mediated C-to-U RNA editing in mouse small intestine and liver

Genome-wide mapping of plasma protein QTLs identifies putatively causal genes and pathways for cardiovascular disease

Insulin promoted mobilization of GLUT4 from a perinuclear storage site requires RAB10

Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging

Linc-MYH configures INO80 to regulate muscle stem cell numbers and skeletal muscle hypertrophy

Loss of the Mia40a oxidoreductase leads to hepato-pancreatic insufficiency in zebrafish

MARMoSET - Extracting Publication-ready Mass Spectrometry Metadata from RAW Files

MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.

Mechanical Forces Regulate Cardiomyocyte Myofilament Maturation via the VCL-SSH1-CFL Axis

Metabolic and proteomic signatures of hypoglycaemia in type 2 diabetes

MiCEE is a ncRNA-protein complex that mediates epigenetic silencing and nucleolar organization

MicroRNA regulation of Cbx7 mediates a switch of Polycomb orthologs during ESC differentiation

MicroRNAs of the miR-290-295 Family Maintain Bivalency in Mouse Embryonic Stem Cells.

Multi-platform Affinity Proteomics Identify Proteins Linked to Metastasis and Immune Suppression in Ovarian Cancer Plasma

Multiubiquitin chain receptors define a layer of substrate selectivity in the ubiquitin-proteasome system

Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease

Positioning of nucleosomes containing γ-H2AX precedes active DNA demethylation and transcription initiation

Proteomic profiling of human cancer pseudopodia for the identification of anti-metastatic drug candidates.

Proteotranscriptomics Reveal Signaling Networks in the Ovarian Cancer Microenvironment

Quantitative Proteomic Approaches in Mouse: Stable Isotope Incorporation by Metabolic (SILAC) or Chemical Labeling (Reductive Dimethylation) Combined with High-Resolution Mass Spectrometry

Quantitative profiling of ubiquitylated proteins reveals proteasome substrates and the substrate repertoire influenced by the Rpn10 receptor pathway

Remodeling of ER-plasma membrane contact sites but not STIM1 phosphorylation inhibits Ca2+ influx in mitosis.

SIRT1 Limits Adipocyte Hyperplasia through c-Myc Inhibition

SIRT1 promotes lipid metabolism and mitochondrial biogenesis in adipocytes and coordinates adipogenesis by targeting key enzymatic pathways

Screening for insulin-independent pathways that modulate glucose homeostasis identifies androgen receptor antagonists

Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT)

Shear stress-induced endothelial adrenomedullin signaling regulates vascular tone and blood pressure

Small-molecule-mediated chemical knock-down of MuRF1/MuRF2 and attenuation of diaphragm dysfunction in chronic heart failure

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins

Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish

Susceptibility of microtubule-associated protein 1 light chain 3β (MAP1LC3B/LC3B) knockout mice to lung injury and fibrosis

Targeting the High-Density Lipoprotein Proteome for the Treatment of Post-Acute Sequelae of SARS-CoV-2

The 2.2 Å Crystal Structure of Hsp33

The CCT chaperonin is a novel regulator of Ca signaling through modulation of Orai1 trafficking

The VLDL receptor regulates membrane progesterone receptor trafficking and non-genomic signaling

The WD40 protein Caf4p is a component of the mitochondrial fission machinery and recruits Dnm1p to mitochondria

The arc of Mass Spectrometry Exchange Formats is long, but it bends toward HDF5.

The multicellular signalling network of ovarian cancer metastases

Tumor-associated macrophages promote ovarian cancer cell migration by secreting transforming growth factor beta induced (TGFBI) and tenascin C

UBXD7 binds multiple ubiquitin ligases and implicates p97 in HIF1alpha turnover

Using hESCs to Probe the Interaction of the Diabetes-Associated Genes CDKAL1 and MT1E.

flippant-An R package for the automated analysis of fluorescence-based scramblase assays

microRNA-mediated regulation of mTOR complex components facilitates discrimination between activation and anergy in CD4 T cells.

multipanelfigure: Simple Assembly of Multiple Plots and Images into a Compound Figure

readat: An R package for reading and working with SomaLogic ADAT files